Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sc04g0006190 Simmondsia chinensis HOM05D007903 ORTHO05D009925 8.3e-82 307.0 155 100.0
Hma1.2p1_1875F.1_g306260 Hydrangea macrophylla HOM05D007903 ORTHO05D009925 1.4e-25 120.2 165 46.1
Potri.008G122700 Populus trichocarpa HOM05D007903 ORTHO05D009925 2.1e-24 116.3 161 46.0
Aqoxy3G00252 Aquilegia oxysepala HOM05D007903 ORTHO05D009925 3.5e-24 115.5 170 42.4
Cfa015866 Carpinus fangiana HOM05D007903 ORTHO05D009925 3.9e-23 112.1 161 42.2
PGSC0003DMG400006002 Solanum tuberosum HOM05D007903 ORTHO05D009925 1.1e-22 110.5 162 42.0
Haze_00633 Corylus avellana HOM05D007903 ORTHO05D009925 1.5e-22 110.2 161 40.4
CSS0015489 Camellia sinensis var. sinensis HOM05D007903 ORTHO05D009925 1.6e-21 106.7 162 44.4
CAN.G25.18 Capsicum annuum HOM05D007903 ORTHO05D009925 1.6e-21 106.7 174 39.7
CiPaw.05G239700 Carya illinoinensis HOM05D007903 ORTHO05D009925 3.7e-21 105.5 170 41.8
Manes.14G104700 Manihot esculenta HOM05D007903 ORTHO05D009925 8.2e-21 104.4 164 41.5
TAR374G1449 Trochodendron aralioides HOM05D007903 ORTHO05D009925 1.4e-20 103.6 164 40.9
Thecc.02G225400 Theobroma cacao HOM05D007903 ORTHO05D009925 3.1e-20 102.4 167 41.3
Ciclev10017603m.g Citrus clementina HOM05D007903 ORTHO05D009925 1.2e-19 100.5 172 41.3
Solyc04g007360.1 Solanum lycopersicum HOM05D007903 ORTHO05D009925 2.6e-19 99.4 160 37.5
Duzib268G0450 Durio zibethinus HOM05D007903 ORTHO05D009925 5.8e-19 98.2 163 41.7
Gohir.A09G042700 Gossypium hirsutum HOM05D007903 ORTHO05D009925 1.3e-18 97.1 169 43.8
Sed0015064 Sechium edule HOM05D007903 ORTHO05D009925 3.8e-18 95.5 161 38.5
Nn4g23903 Nelumbo nucifera HOM05D007903 ORTHO05D009925 5.0e-18 95.1 176 38.6
Sabra08G0093200 Salix brachista HOM05D007903 ORTHO05D009925 5.0e-18 95.1 149 40.3
Potri.010G122600 Populus trichocarpa HOM05D007903 ORTHO05D009925 3.2e-17 92.4 163 39.3
MD16G1040300 Malus domestica HOM05D007903 ORTHO05D009925 4.2e-17 92.0 162 35.8
DCAR_030171 Daucus carota HOM05D007903 ORTHO05D009925 5.5e-17 91.7 162 37.7
Hma1.2p1_2787F.1_g328510 Hydrangea macrophylla HOM05D007903 ORTHO05D009925 5.5e-17 91.7 139 43.9
Sabra10G0092700 Salix brachista HOM05D007903 ORTHO05D009925 3.5e-16 89.0 164 39.0
MD13G1039400 Malus domestica HOM05D007903 ORTHO05D009925 4.6e-16 88.6 163 33.7
Gohir.D09G043400 Gossypium hirsutum HOM05D007903 ORTHO05D009925 7.9e-16 87.8 169 42.0
Gorai.006G050300 Gossypium raimondii HOM05D007903 ORTHO05D009925 1.0e-15 87.4 169 42.0
QL01p040711 Quercus lobata HOM05D007903 ORTHO05D009925 1.8e-15 86.7 133 39.8
Oeu057730.1 Olea europaea HOM05D007903 ORTHO05D009925 3.0e-15 85.9 153 39.9
Lalb_Chr06g0165971 Lupinus albus HOM05D007903 ORTHO05D009925 3.9e-15 85.5 162 36.4
CsaV3_5G034450 Cucumis sativus L. HOM05D007903 ORTHO05D009925 5.1e-15 85.1 139 36.0
CSS0009081 Camellia sinensis var. sinensis HOM05D007903 ORTHO05D009925 3.3e-14 82.4 151 39.1
PGR119G1971 Punica granatum HOM05D007903 ORTHO05D009925 4.3e-14 82.0 154 38.3
Sopen04g002420 Solanum pennellii HOM05D007903 ORTHO05D009925 7.4e-14 81.3 115 40.0
Prupe.1G313800 Prunus persica HOM05D007903 ORTHO05D009925 2.2e-13 79.7 165 35.8
CANSAT01G0431 Cannabis sativa HOM05D007903 ORTHO05D009925 3.7e-13 79.0 164 32.9
TWI31G0067 Tripterygium wilfordii HOM05D007903 ORTHO05D009925 6.3e-13 78.2 158 37.3
FAN12G2568 Fragaria x ananassa HOM05D007903 ORTHO05D009925 2.4e-12 76.3 173 34.7
Lj5g0001705 Lotus japonicus HOM05D007903 ORTHO05D009925 2.4e-12 76.3 166 34.9
FAN17G2767 Fragaria x ananassa HOM05D007903 ORTHO05D009925 4.1e-12 75.5 171 34.5
Migut.E00359 Erythranthe guttata HOM05D007903 ORTHO05D009925 5.3e-12 75.1 152 36.2
FAN07G0160 Fragaria x ananassa HOM05D007903 ORTHO05D009925 5.3e-12 75.1 170 34.7
SalBow8G0258 Salvia bowleyana HOM05D065226 ORTHO05D009925 5.3e-12 75.1 157 37.6
SalBow8G1517 Salvia bowleyana HOM05D065226 ORTHO05D009925 5.3e-12 75.1 157 37.6
VMungo0720G0077 Vigna mungo HOM05D007903 ORTHO05D009925 6.9e-12 74.7 157 35.0
FvH4_4g27040 Fragaria vesca HOM05D007903 ORTHO05D009925 9.0e-12 74.3 173 35.3
FAN12G1984 Fragaria x ananassa HOM05D007903 ORTHO05D009925 9.0e-12 74.3 173 35.3
AL2G27200 Arabidopsis lyrata HOM05D007903 ORTHO05D009925 1.2e-11 73.9 162 32.7
BcaB03g15412 Brassica carinata HOM05D007903 ORTHO05D009925 1.2e-11 73.9 169 32.5
THA.LOC104821918 Tarenaya hassleriana HOM05D007903 ORTHO05D009925 2.0e-11 73.2 161 35.4
CSS0036148 Camellia sinensis var. sinensis HOM05D007903 ORTHO05D009925 2.6e-11 72.8 151 37.7
Cpa.g.sc65.47 Carica papaya HOM05D007903 ORTHO05D009925 3.4e-11 72.4 163 35.0
RcHm_v2.0_Chr4g0434841 Rosa chinensis HOM05D007903 ORTHO05D009925 3.4e-11 72.4 170 35.9
ClCG05G022570 Citrullus lanatus HOM05D007903 ORTHO05D009925 4.5e-11 72.0 135 36.3
FAN22G0942 Fragaria x ananassa HOM05D007903 ORTHO05D009925 4.5e-11 72.0 174 34.5
EL10Ac6g14355 Beta vulgaris HOM05D007903 ORTHO05D009925 7.7e-11 71.2 155 38.7
BraA02t06557Z Brassica rapa HOM05D007903 ORTHO05D009925 7.7e-11 71.2 169 32.0
Sp5g23400 Schrenkiella parvula HOM05D007903 ORTHO05D009925 7.7e-11 71.2 165 31.5
Carub.0002s1485 Capsella rubella HOM05D007903 ORTHO05D009925 1.0e-10 70.9 163 30.7
Peaxi162Scf00564g00039 Petunia axillaris HOM05D007903 ORTHO05D009925 1.3e-10 70.5 128 35.2
BcaC08g45975 Brassica carinata HOM05D007903 ORTHO05D009925 1.7e-10 70.1 167 31.1
C06p37650 Brassica napus HOM05D007903 ORTHO05D009925 1.7e-10 70.1 167 31.1
BolC6t38868H Brassica oleracea HOM05D007903 ORTHO05D009925 1.7e-10 70.1 167 31.1
Glyma.20G117500 Glycine max HOM05D007903 ORTHO05D009925 6.5e-10 68.2 152 37.5
Phvul.007G029300 Phaseolus vulgaris HOM05D007903 ORTHO05D009925 1.1e-09 67.4 156 35.9
AT1G68350 Arabidopsis thaliana HOM05D007903 ORTHO05D009925 3.2e-09 65.9 165 31.5
Thhalv10019802m.g Eutrema salsugineum HOM05D007903 ORTHO05D009925 4.2e-09 65.5 168 29.2
CARHR061060 Cardamine hirsuta HOM05D007903 ORTHO05D009925 9.4e-09 64.3 161 32.3
COL.COLO4_08991 Corchorus olitorius HOM05D007903 ORTHO05D009925 2.1e-08 63.2 151 35.1
HPP92_004796 Vanilla planifolia HOM05D007903 ORTHO05D009925 1.0e-07 60.8 165 30.3
BcaB05g24366 Brassica carinata HOM05D007903 ORTHO05D009925 1.4e-07 60.5 166 31.3
Dinv31619 Davidia involucrata HOM05D007903 ORTHO05D009925 2.3e-07 59.7 155 34.2
Lsat_1_v5_gn_3_57941 Lactuca sativa HOM05D007903 ORTHO05D009925 3.9e-07 58.9 107 36.4
Os01g0133200 Oryza sativa ssp. japonica HOM05D007903 ORTHO05D009925 1.1e-06 57.4 179 28.5


User provided reference genes

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