Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sc04g0005730 Simmondsia chinensis HOM05D001881 ORTHO05D001856 1.1e-77 293.5 172 100.0
Sc10g0003380 Simmondsia chinensis HOM05D001881 ORTHO05D001856 3.3e-39 165.6 111 80.2
GSVIVG01011601001 Vitis vinifera HOM05D001881 ORTHO05D001856 2.4e-13 79.7 79 54.4
Cfa015068 Carpinus fangiana HOM05D001881 ORTHO05D001856 2.2e-11 73.2 82 53.7
CSS0003370 Camellia sinensis var. sinensis HOM05D001881 ORTHO05D001856 2.9e-11 72.8 84 51.2
Haze_10821 Corylus avellana HOM05D001881 ORTHO05D001856 3.8e-11 72.4 82 53.7
Dinv14367 Davidia involucrata HOM05D001881 ORTHO05D001856 5.0e-11 72.0 85 51.8
CiPaw.06G059100 Carya illinoinensis HOM05D001881 ORTHO05D001856 6.5e-11 71.6 75 53.3
Dinv11050 Davidia involucrata HOM05D001881 ORTHO05D001856 6.5e-11 71.6 79 53.2
Lalb_Chr07g0187841 Lupinus albus HOM05D001881 ORTHO05D001856 6.5e-11 71.6 84 53.6
arahy.Tifrunner.gnm1.ann1.C5SZT3 Arachis hypogaea HOM05D001881 ORTHO05D001856 1.9e-10 70.1 84 51.2
arahy.Tifrunner.gnm1.ann1.535NIJ Arachis hypogaea HOM05D001881 ORTHO05D001856 3.2e-10 69.3 84 50.0
Glyma.08G093800 Glycine max HOM05D001881 ORTHO05D001856 3.2e-10 69.3 71 57.7
Duzib248G1225 Durio zibethinus HOM05D001881 ORTHO05D001856 1.2e-09 67.4 74 56.8
Glyma.05G138600 Glycine max HOM05D001881 ORTHO05D001856 1.2e-09 67.4 84 52.4
Nn4g24500 Nelumbo nucifera HOM05D001881 ORTHO05D001856 2.7e-09 66.2 84 46.4
Duzib251G0549 Durio zibethinus HOM05D001881 ORTHO05D001856 3.6e-09 65.9 76 53.9
CSS0030661 Camellia sinensis var. sinensis HOM05D001881 ORTHO05D001856 4.7e-09 65.5 71 53.5
CSS0031376 Camellia sinensis var. sinensis HOM05D001881 ORTHO05D001856 4.7e-09 65.5 71 53.5
Cpa.g.sc2.134 Carica papaya HOM05D001881 ORTHO05D001856 6.1e-09 65.1 71 50.7
Gorai.005G153400 Gossypium raimondii HOM05D001881 ORTHO05D001856 6.1e-09 65.1 83 47.0
Duzib268G1728 Durio zibethinus HOM05D001881 ORTHO05D001856 1.4e-08 63.9 76 51.3
Lalb_Chr12g0209341 Lupinus albus HOM05D001881 ORTHO05D001856 1.4e-08 63.9 84 48.8
QL03p038975 Quercus lobata HOM05D001881 ORTHO05D001856 1.4e-08 63.9 71 52.1
FAN17G2565 Fragaria x ananassa HOM05D001881 ORTHO05D001856 1.8e-08 63.5 82 47.6
Gohir.A03G112900 Gossypium hirsutum HOM05D001881 ORTHO05D001856 1.8e-08 63.5 84 46.4
Gohir.D02G137200 Gossypium hirsutum HOM05D001881 ORTHO05D001856 1.8e-08 63.5 83 45.8
Gohir.D05G308600 Gossypium hirsutum HOM05D001881 ORTHO05D001856 1.8e-08 63.5 76 52.6
CANSAT78G1975 Cannabis sativa HOM05D001881 ORTHO05D001856 2.3e-08 63.2 100 40.0
Gorai.009G328700 Gossypium raimondii HOM05D001881 ORTHO05D001856 2.3e-08 63.2 74 52.7
Phvul.002G181800 Phaseolus vulgaris HOM05D001881 ORTHO05D001856 2.3e-08 63.2 83 47.0
FvH4_4g33050 Fragaria vesca HOM05D001881 ORTHO05D001856 3.0e-08 62.8 82 47.6
FAN12G1232 Fragaria x ananassa HOM05D001881 ORTHO05D001856 3.0e-08 62.8 82 47.6
Gohir.A05G305600 Gossypium hirsutum HOM05D001881 ORTHO05D001856 3.0e-08 62.8 67 55.2
VMungo0251G3421 Vigna mungo HOM05D001881 ORTHO05D001856 3.0e-08 62.8 83 47.0
Lj4g0010274 Lotus japonicus HOM05D001881 ORTHO05D001856 3.9e-08 62.4 85 49.4
Nn3g18452 Nelumbo nucifera HOM05D001881 ORTHO05D001856 3.9e-08 62.4 72 51.4
Prupe.1G337300 Prunus persica HOM05D001881 ORTHO05D001856 3.9e-08 62.4 82 48.8
FAN07G1141 Fragaria x ananassa HOM05D001881 ORTHO05D001856 6.7e-08 61.6 82 47.6
Thecc.02G304900 Theobroma cacao HOM05D001881 ORTHO05D001856 8.8e-08 61.2 74 54.1
FAN22G0329 Fragaria x ananassa HOM05D001881 ORTHO05D001856 1.1e-07 60.8 72 51.4
Actinidia20110 Actinidia chinensis HOM05D001881 ORTHO05D001856 2.0e-07 60.1 74 50.0
MD13G1016300 Malus domestica HOM05D001881 ORTHO05D001856 2.0e-07 60.1 82 48.8
Glyma.20G012100 Glycine max HOM05D001881 ORTHO05D001856 2.6e-07 59.7 85 47.1
COL.COLO4_27590 Corchorus olitorius HOM05D001881 ORTHO05D001856 3.3e-07 59.3 82 48.8
Glyma.07G175300 Glycine max HOM05D001881 ORTHO05D001856 4.4e-07 58.9 73 46.6
Lalb_Chr13g0293641 Lupinus albus HOM05D001881 ORTHO05D001856 4.4e-07 58.9 83 48.2
RcHm_v2.0_Chr4g0442091 Rosa chinensis HOM05D001881 ORTHO05D001856 5.7e-07 58.5 82 45.1
MSTRG.13641 Avicennia marina HOM05D001881 ORTHO05D001856 1.3e-06 57.4 87 44.8
Phvul.003G014200 Phaseolus vulgaris HOM05D001881 ORTHO05D001856 1.7e-06 57.0 49 61.2
VMungo1215G1819 Vigna mungo HOM05D001881 ORTHO05D001856 1.7e-06 57.0 61 55.7
Actinidia04321 Actinidia chinensis HOM05D001881 ORTHO05D001856 2.8e-06 56.2 71 53.5
TAR629G2357 Trochodendron aralioides HOM05D001881 ORTHO05D001856 6.3e-06 55.1 85 44.7
MELO3C018268.2 Cucumis melo HOM05D001881 ORTHO05D001856 8.2e-06 54.7 84 45.2
Lj6C732G10 Lonicera japonica HOM05D001881 ORTHO05D001856 8.2e-06 54.7 48 60.4
MBI19_g25217_MAGBIO Magnolia biondii HOM05D001881 ORTHO05D001856 8.2e-06 54.7 85 48.2
MD16G1013800 Malus domestica HOM05D001881 ORTHO05D001856 8.2e-06 54.7 81 43.2


User provided reference genes

Program Settings