Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sc04g0003130 Simmondsia chinensis HOM05D001070 ORTHO05D002096 7.4e-47 190.3 102 100.0
Sc25g0002030 Simmondsia chinensis HOM05D001070 ORTHO05D002096 9.7e-39 163.3 95 91.6
ScUNg0000260 Simmondsia chinensis HOM05D001070 ORTHO05D002096 1.0e-32 143.3 83 91.6
ScUNg0001540 Simmondsia chinensis HOM05D001070 ORTHO05D002096 2.3e-19 99.0 65 87.7
TAR626G0349 Trochodendron aralioides HOM05D001070 ORTHO05D002096 3.4e-15 85.1 80 62.5
TAR624G0722 Trochodendron aralioides HOM05D001070 ORTHO05D002096 6.4e-14 80.9 79 60.8
TAR633G1337 Trochodendron aralioides HOM05D001070 ORTHO05D002096 6.4e-14 80.9 79 60.8
DCAR_019125 Daucus carota HOM05D001070 ORTHO05D002096 1.1e-13 80.1 81 66.7
DCAR_032544 Daucus carota HOM05D001070 ORTHO05D002096 1.1e-13 80.1 81 66.7
Ciclev10027640m.g Citrus clementina HOM05D001070 ORTHO05D002096 2.4e-13 79.0 110 54.5
Ciclev10010879m.g Citrus clementina HOM05D001070 ORTHO05D002096 5.4e-13 77.8 98 57.1
Ciclev10013978m.g Citrus clementina HOM05D001070 ORTHO05D002096 5.4e-13 77.8 98 57.1
Ciclev10013980m.g Citrus clementina HOM05D001070 ORTHO05D002096 5.4e-13 77.8 98 57.1
Ciclev10013987m.g Citrus clementina HOM05D001070 ORTHO05D002096 5.4e-13 77.8 98 57.1
Ciclev10013999m.g Citrus clementina HOM05D001070 ORTHO05D002096 5.4e-13 77.8 98 57.1
Ciclev10014002m.g Citrus clementina HOM05D001070 ORTHO05D002096 5.4e-13 77.8 98 57.1
Ciclev10030452m.g Citrus clementina HOM05D001070 ORTHO05D002096 5.4e-13 77.8 98 57.1
FAN13G2309 Fragaria x ananassa HOM05D001070 ORTHO05D002096 1.2e-12 76.6 67 73.1
EL10Ac5g11665 Beta vulgaris HOM05D001070 ORTHO05D002096 1.6e-12 76.3 92 59.8
EL10Ac7g17376 Beta vulgaris HOM05D001070 ORTHO05D002096 1.6e-12 76.3 92 59.8
PGR111G0057 Punica granatum HOM05D001070 ORTHO05D002096 2.7e-12 75.5 81 59.3
Oeu010690.1 Olea europaea HOM05D001070 ORTHO05D002096 3.5e-12 75.1 107 49.5
Oeu022558.1 Olea europaea HOM05D001070 ORTHO05D002096 3.0e-11 72.0 110 51.8
Nitab4.5_0023521g0010 Nicotiana tabacum HOM05D000388 ORTHO05D000473 3.9e-11 71.6 121 48.8
Solyc00g500040.1 Solanum lycopersicum HOM05D001070 ORTHO05D013014 1.1e-10 70.1 117 47.9
Solyc00g500043.1 Solanum lycopersicum HOM05D001070 ORTHO05D002096 1.1e-10 70.1 117 47.9
Solyc00g500084.1 Solanum lycopersicum HOM05D001070 ORTHO05D002096 1.1e-10 70.1 117 47.9
Solyc00g500088.1 Solanum lycopersicum HOM05D001070 ORTHO05D010233 1.1e-10 70.1 117 47.9
Solyc00g500126.1 Solanum lycopersicum HOM05D001070 ORTHO05D002096 1.1e-10 70.1 117 47.9
Solyc00g500190.1 Solanum lycopersicum HOM05D001070 ORTHO05D002096 1.1e-10 70.1 88 58.0
Solyc00g500196.1 Solanum lycopersicum HOM05D001070 ORTHO05D002096 1.1e-10 70.1 117 47.9
Solyc00g500278.1 Solanum lycopersicum HOM05D001070 ORTHO05D002096 1.1e-10 70.1 117 47.9
Solyc00g500324.1 Solanum lycopersicum HOM05D001070 ORTHO05D010233 1.1e-10 70.1 117 47.9
Oeu023335.1 Olea europaea HOM05D001070 ORTHO05D002096 1.5e-10 69.7 112 49.1
PGSC0003DMG400004187 Solanum tuberosum HOM05D001070 ORTHO05D002096 1.5e-10 69.7 117 47.9
Peaxi162Scf00130g00416 Petunia axillaris HOM05D001070 ORTHO05D002096 3.3e-10 68.6 78 61.5
Peaxi162Scf00338g00618 Petunia axillaris HOM05D001070 ORTHO05D002096 3.3e-10 68.6 78 61.5
Peaxi162Scf00536g00047 Petunia axillaris HOM05D001070 ORTHO05D002096 3.3e-10 68.6 78 61.5
Nitab4.5_0004841g0060 Nicotiana tabacum HOM05D001070 ORTHO05D002096 5.6e-10 67.8 100 52.0
Aqoxy4G02031 Aquilegia oxysepala HOM05D001070 ORTHO05D002096 1.2e-09 66.6 86 53.5
ClCG11G009270 Citrullus lanatus HOM05D001070 ORTHO05D002096 1.6e-09 66.2 60 66.7
Nitab4.5_0002628g0020 Nicotiana tabacum HOM05D001070 ORTHO05D002096 2.1e-09 65.9 98 51.0
Sed0002593 Sechium edule HOM05D001070 ORTHO05D002096 2.8e-09 65.5 88 53.4
Sed0025207 Sechium edule HOM05D001070 ORTHO05D002096 2.8e-09 65.5 88 53.4
EL10Ac4g08269 Beta vulgaris HOM05D001070 ORTHO05D002096 4.7e-09 64.7 94 55.3
Nitab4.5_0012234g0030 Nicotiana tabacum HOM05D001070 ORTHO05D002096 4.7e-09 64.7 98 51.0
SalBow1G3373 Salvia bowleyana HOM05D001070 ORTHO05D002096 4.7e-09 64.7 94 48.9
SalBow1G6555 Salvia bowleyana HOM05D001070 ORTHO05D002096 4.7e-09 64.7 94 48.9
Potri.011G073900 Populus trichocarpa HOM05D001070 ORTHO05D002096 6.2e-09 64.3 65 61.5
Solyc02g011860.1 Solanum lycopersicum HOM05D001070 ORTHO05D002096 8.0e-09 63.9 82 58.5
CiPaw.01G098400 Carya illinoinensis HOM05D001070 ORTHO05D002096 1.1e-08 63.5 77 55.8
Peaxi162Scf00139g00015 Petunia axillaris HOM05D001070 ORTHO05D002096 1.1e-08 63.5 78 57.7
Gohir.A03G072900 Gossypium hirsutum HOM05D001070 ORTHO05D002096 4.0e-08 61.6 102 51.0
Solyc12g036550.3 Solanum lycopersicum HOM05D001070 ORTHO05D002096 4.0e-08 61.6 69 65.2
CAN.G965.9 Capsicum annuum HOM05D001070 ORTHO05D002096 5.2e-08 61.2 67 59.7
Potri.002G008176 Populus trichocarpa HOM05D001070 ORTHO05D002096 2.0e-07 59.3 48 79.2
Sed0000142 Sechium edule HOM05D001070 ORTHO05D002096 3.4e-07 58.5 78 51.3
CAN.G100.34 Capsicum annuum HOM05D001200 ORTHO05D002731 9.8e-07 57.0 67 58.2
Sed0020782 Sechium edule HOM05D001070 ORTHO05D002096 1.3e-06 56.6 59 64.4
EL10As15g24135 Beta vulgaris HOM05D001070 ORTHO05D002096 1.7e-06 56.2 68 57.4
Solyc11g021310.1 Solanum lycopersicum HOM05D001070 ORTHO05D002096 8.3e-06 53.9 100 45.0


User provided reference genes

Program Settings