Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sc04g0002780 Simmondsia chinensis HOM05D023682 ORTHO05D026147 3.6e-120 434.9 214 100.0
Sc04g0002890 Simmondsia chinensis HOM05D000007 ORTHO05D026147 3.4e-41 172.6 178 60.1
Sc04g0002860 Simmondsia chinensis HOM05D000007 ORTHO05D026147 7.8e-38 161.4 180 53.9
EL10Ac2g03691 Beta vulgaris HOM05D000007 ORTHO05D012960 5.6e-12 75.5 116 42.2
AUR62016300 Chenopodium quinoa HOM05D000007 ORTHO05D009490 3.6e-11 72.8 161 34.2
EL10Ac2g03689 Beta vulgaris HOM05D000007 ORTHO05D012960 4.7e-11 72.4 78 51.3
Ah.03g138200 Amaranthus hybridus HOM05D000754 ORTHO05D012960 2.4e-10 70.1 116 38.8
AUR62011487 Chenopodium quinoa HOM05D000218 ORTHO05D000125 5.2e-10 68.9 91 47.3
AUR62019384 Chenopodium quinoa HOM05D000007 ORTHO05D000017 6.9e-10 68.6 118 39.8
EL10Ac3g05294 Beta vulgaris HOM05D000007 ORTHO05D012960 2.0e-09 67.0 77 41.6
AUR62019385 Chenopodium quinoa HOM05D000007 ORTHO05D012960 2.0e-09 67.0 79 46.8
Ah.07g205750 Amaranthus hybridus HOM05D000007 ORTHO05D012960 2.6e-09 66.6 78 43.6
Ah.13g070150 Amaranthus hybridus HOM05D000007 ORTHO05D000017 3.4e-09 66.2 151 33.1
AUR62020881 Chenopodium quinoa HOM05D005651 ORTHO05D006877 3.4e-09 66.2 91 41.8
AUR62005047 Chenopodium quinoa HOM05D000007 ORTHO05D000017 4.4e-09 65.9 119 41.2
Hund29427 Selenicereus undatus HOM05D000007 ORTHO05D000017 7.6e-09 65.1 157 31.8
Hund29429 Selenicereus undatus HOM05D000007 ORTHO05D000017 7.6e-09 65.1 157 31.8
AUR62038731 Chenopodium quinoa HOM05D000007 ORTHO05D012960 1.7e-08 63.9 83 37.3
Ah.04g149520 Amaranthus hybridus HOM05D000007 ORTHO05D009623 2.2e-08 63.5 90 43.3
AUR62038732 Chenopodium quinoa HOM05D000007 ORTHO05D012960 2.9e-08 63.2 111 36.0
Duzib151G0963 Durio zibethinus HOM05D000007 ORTHO05D000017 8.4e-08 61.6 157 36.9
Peaxi162Scf00449g00214 Petunia axillaris HOM05D000007 ORTHO05D000017 1.9e-07 60.5 71 50.7
Rhsim05G0019600 Rhododendron simsii HOM05D015868 ORTHO05D013379 1.9e-07 60.5 54 55.6
PGSC0003DMG400013111 Solanum tuberosum HOM05D000007 ORTHO05D000017 1.9e-07 60.5 79 43.0
Gohir.D09G059300 Gossypium hirsutum HOM05D000007 ORTHO05D000017 2.4e-07 60.1 158 35.4
AUR62016299 Chenopodium quinoa HOM05D000007 ORTHO05D000017 3.2e-07 59.7 49 59.2
Rhsim08G0032600 Rhododendron simsii HOM05D000007 ORTHO05D013379 3.2e-07 59.7 65 50.8
RhsimUnG0240800 Rhododendron simsii HOM05D015868 ORTHO05D013379 3.2e-07 59.7 65 50.8
Glyma.07G148300 Glycine max HOM05D000007 ORTHO05D000017 4.2e-07 59.3 78 47.4
RhsimUnG0241000 Rhododendron simsii HOM05D015868 ORTHO05D013379 4.2e-07 59.3 55 54.5
Gorai.006G073900 Gossypium raimondii HOM05D000007 ORTHO05D000017 5.4e-07 58.9 158 34.8
Thecc.04G270500 Theobroma cacao HOM05D000007 ORTHO05D000017 5.4e-07 58.9 157 36.3
Gohir.A09G060100 Gossypium hirsutum HOM05D000007 ORTHO05D000017 7.1e-07 58.5 158 35.4
C02p03830 Brassica napus HOM05D001738 ORTHO05D001644 9.3e-07 58.2 52 48.1
CiPaw.07G037600 Carya illinoinensis HOM05D000007 ORTHO05D000017 9.3e-07 58.2 72 50.0
AUR62008539 Chenopodium quinoa HOM05D000007 ORTHO05D009623 9.3e-07 58.2 48 62.5
AUR62016308 Chenopodium quinoa HOM05D017109 ORTHO05D000017 9.3e-07 58.2 150 32.7
Peaxi162Scf00421g00007 Petunia axillaris HOM05D000007 ORTHO05D000017 9.3e-07 58.2 76 48.7
Rhsim11G0052400 Rhododendron simsii HOM05D023682 ORTHO05D013379 9.3e-07 58.2 60 51.7
Migut.H00811 Erythranthe guttata HOM05D000007 ORTHO05D000017 1.2e-06 57.8 185 31.4
Actinidia26832 Actinidia chinensis HOM05D000007 ORTHO05D000017 1.6e-06 57.4 48 60.4
Migut.J01513 Erythranthe guttata HOM05D000664 ORTHO05D000491 1.6e-06 57.4 68 45.6
Eucgr.H02734 Eucalyptus grandis HOM05D000007 ORTHO05D000017 1.6e-06 57.4 142 38.0
Potri.012G014700 Populus trichocarpa HOM05D000007 ORTHO05D000039 1.6e-06 57.4 63 54.0
EL10Ac9g20886 Beta vulgaris HOM05D000007 ORTHO05D000039 2.7e-06 56.6 78 43.6
AUR62016306 Chenopodium quinoa HOM05D017109 ORTHO05D009623 2.7e-06 56.6 98 37.8
Cc07_g15070 Coffea canephora HOM05D000007 ORTHO05D000017 2.7e-06 56.6 50 54.0
SalBow8G1563 Salvia bowleyana HOM05D000007 ORTHO05D005385 2.7e-06 56.6 79 45.6
vmacro22600 Vaccinium macrocarpon HOM05D000007 ORTHO05D013648 2.7e-06 56.6 45 55.6
Lj3P550T42 Lonicera japonica HOM05D000007 ORTHO05D000017 3.5e-06 56.2 55 54.5
Peaxi162Scf00526g00073 Petunia axillaris HOM05D000007 ORTHO05D000017 3.5e-06 56.2 61 54.1
BcaC03g13251 Brassica carinata HOM05D001738 ORTHO05D001644 4.6e-06 55.8 45 51.1
Cc03_g07520 Coffea canephora HOM05D000007 ORTHO05D000017 4.6e-06 55.8 44 61.4
Haze_13297 Corylus avellana HOM05D000007 ORTHO05D000039 4.6e-06 55.8 122 33.6
DCAR_012932 Daucus carota HOM05D000007 ORTHO05D013591 4.6e-06 55.8 44 56.8
Dinv38239 Davidia involucrata HOM05D000171 ORTHO05D000101 4.6e-06 55.8 58 50.0
Migut.C00269 Erythranthe guttata HOM05D000007 ORTHO05D005385 4.6e-06 55.8 75 46.7
Medtr2g046900 Medicago truncatula HOM05D000007 ORTHO05D000017 4.6e-06 55.8 84 45.2
Peaxi162Scf01070g00125 Petunia axillaris HOM05D000007 ORTHO05D000017 4.6e-06 55.8 67 46.3
SGA_v2.0_scaffold59G20641 Striga asiatica HOM05D000007 ORTHO05D000017 4.6e-06 55.8 65 52.3
vmacro09289 Vaccinium macrocarpon HOM05D000007 ORTHO05D000039 4.6e-06 55.8 43 67.4
CAN.G500.29 Capsicum annuum HOM05D000007 ORTHO05D000017 6.0e-06 55.5 64 50.0
DCAR_015472 Daucus carota HOM05D000007 ORTHO05D000017 6.0e-06 55.5 99 34.3
ECA247G0796 Erigeron canadensis HOM05D000004 ORTHO05D000002 6.0e-06 55.5 49 53.1
Migut.C00265 Erythranthe guttata HOM05D000007 ORTHO05D005385 6.0e-06 55.5 75 45.3
Migut.C00266 Erythranthe guttata HOM05D000007 ORTHO05D005385 6.0e-06 55.5 75 45.3
Migut.C00267 Erythranthe guttata HOM05D000007 ORTHO05D005385 6.0e-06 55.5 75 45.3
Nitab4.5_0008120g0040 Nicotiana tabacum HOM05D000007 ORTHO05D000039 6.0e-06 55.5 51 54.9
PGSC0003DMG400046080 Solanum tuberosum HOM05D000007 ORTHO05D000017 6.0e-06 55.5 86 41.9
SGA_v2.0_scaffold49G18160 Striga asiatica HOM05D000007 ORTHO05D000017 6.0e-06 55.5 49 59.2
TPR.G29662 Trifolium pratense HOM05D000007 ORTHO05D000017 6.0e-06 55.5 64 45.3
Actinidia18959 Actinidia chinensis HOM05D023682 ORTHO05D013379 7.8e-06 55.1 49 57.1
Lsat_1_v5_gn_4_143700 Lactuca sativa HOM05D000007 ORTHO05D000017 7.8e-06 55.1 62 51.6
Peaxi162Scf00421g00021 Petunia axillaris HOM05D000007 ORTHO05D000017 7.8e-06 55.1 51 54.9
Rhsim11G0052500 Rhododendron simsii HOM05D023682 ORTHO05D013379 7.8e-06 55.1 53 52.8
Sopen01g028740 Solanum pennellii HOM05D000007 ORTHO05D000017 7.8e-06 55.1 70 50.0


User provided reference genes

Program Settings