Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sc04g0002380 Simmondsia chinensis HOM05D009209 ORTHO05D011057 5.3e-81 304.3 153 100.0
Sc13g0007280 Simmondsia chinensis HOM05D009209 ORTHO05D011057 1.3e-15 87.0 64 59.4
Sc14g0003540 Simmondsia chinensis HOM05D009209 ORTHO05D011057 1.2e-13 80.5 65 49.2
Sc07g0006130 Simmondsia chinensis HOM05D009209 ORTHO05D009629 2.8e-13 79.3 105 39.0
Sc03g0004030 Simmondsia chinensis HOM05D009209 ORTHO05D011705 3.6e-13 79.0 64 51.6
Sc03g0004050 Simmondsia chinensis HOM05D009209 ORTHO05D011705 3.6e-13 79.0 64 51.6
Sc15g0003590 Simmondsia chinensis HOM05D009209 ORTHO05D011057 4.7e-13 78.6 64 54.7
Sc15g0002150 Simmondsia chinensis HOM05D009209 ORTHO05D011057 1.4e-12 77.0 122 35.2
Actinidia04023 Actinidia chinensis HOM05D012898 ORTHO05D011057 6.0e-08 61.6 60 46.7
Sc24g0004230 Simmondsia chinensis HOM05D009348 ORTHO05D010856 6.0e-08 61.6 89 40.4
CSS0000959 Camellia sinensis var. sinensis HOM05D011882 ORTHO05D011057 1.3e-07 60.5 64 46.9
Sc09g0002060 Simmondsia chinensis HOM05D009348 ORTHO05D010856 1.3e-07 60.5 85 41.2
Rhsim09G0042800 Rhododendron simsii HOM05D017214 ORTHO05D018100 1.5e-06 57.0 62 38.7
Sc02g0003510 Simmondsia chinensis HOM05D009348 ORTHO05D010856 1.5e-06 57.0 96 34.4
Sc10g0002300 Simmondsia chinensis HOM05D009348 ORTHO05D010856 2.5e-06 56.2 103 32.0
Actinidia11796 Actinidia chinensis HOM05D002604 ORTHO05D009356 3.3e-06 55.8 81 34.6
Sc22g0002690 Simmondsia chinensis HOM05D000043 ORTHO05D030613 3.3e-06 55.8 65 44.6
Rhsim02G0148500 Rhododendron simsii HOM05D035845 ORTHO05D037452 4.3e-06 55.5 63 41.3
Sc03g0005750 Simmondsia chinensis HOM05D009348 ORTHO05D011705 4.3e-06 55.5 63 42.9
vmacro11531 Vaccinium macrocarpon HOM05D010265 ORTHO05D009356 4.3e-06 55.5 126 31.7
Ah.07g198450 Amaranthus hybridus HOM05D008762 ORTHO05D011252 5.6e-06 55.1 69 42.0
CSS0016458 Camellia sinensis var. sinensis HOM05D011882 ORTHO05D011057 5.6e-06 55.1 108 28.7
Sc01g0006920 Simmondsia chinensis HOM05D006933 ORTHO05D009629 5.6e-06 55.1 115 31.3
Sc22g0001820 Simmondsia chinensis HOM05D009348 ORTHO05D010856 5.6e-06 55.1 116 30.2
vmacro21908 Vaccinium macrocarpon HOM05D008219 ORTHO05D009356 5.6e-06 55.1 113 33.6
Sc02g0004050 Simmondsia chinensis HOM05D006933 ORTHO05D009629 7.3e-06 54.7 123 30.1
Sc14g0002520 Simmondsia chinensis HOM05D009209 ORTHO05D011705 7.3e-06 54.7 42 54.8
CSS0047350 Camellia sinensis var. sinensis HOM05D011882 ORTHO05D011057 9.6e-06 54.3 62 40.3
Sc15g0000710 Simmondsia chinensis HOM05D009209 ORTHO05D011705 9.6e-06 54.3 87 32.2
vmacro00252 Vaccinium macrocarpon HOM05D000072 ORTHO05D000026 9.6e-06 54.3 68 36.8


User provided reference genes

Program Settings