Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sc04g0002090 Simmondsia chinensis HOM05D003533 ORTHO05D004009 4.8e-37 157.5 91 100.0
Ah.02g112790 Amaranthus hybridus HOM05D003533 ORTHO05D004009 4.6e-16 87.8 91 58.2
Duzib084G0973 Durio zibethinus HOM05D003533 ORTHO05D004009 8.8e-15 83.6 95 50.5
Lsat_1_v5_gn_1_12101 Lactuca sativa HOM05D003533 ORTHO05D004009 1.1e-14 83.2 85 51.8
CiPaw.06G076000 Carya illinoinensis HOM05D003533 ORTHO05D004009 1.9e-14 82.4 88 51.1
CiPaw.06G076100 Carya illinoinensis HOM05D003533 ORTHO05D004009 1.9e-14 82.4 88 51.1
CiPaw.06G076200 Carya illinoinensis HOM05D003533 ORTHO05D004009 1.9e-14 82.4 88 51.1
TAR629G1875 Trochodendron aralioides HOM05D003533 ORTHO05D004009 3.3e-14 81.6 88 50.0
CiPaw.06G076300 Carya illinoinensis HOM05D003533 ORTHO05D004009 7.4e-14 80.5 88 50.0
Thecc.03G004200 Theobroma cacao HOM05D003533 ORTHO05D004009 7.4e-14 80.5 91 49.5
Thecc.03G004000 Theobroma cacao HOM05D003533 ORTHO05D004009 9.7e-14 80.1 94 47.9
QL03p067197 Quercus lobata HOM05D003533 ORTHO05D004009 1.7e-13 79.3 84 48.8
Manes.06G100300 Manihot esculenta HOM05D003533 ORTHO05D004009 2.8e-13 78.6 85 47.1
Peaxi162Scf01141g00003 Petunia axillaris HOM05D003533 ORTHO05D004009 3.7e-13 78.2 95 45.3
ECA247G1125 Erigeron canadensis HOM05D003533 ORTHO05D004009 4.8e-13 77.8 87 47.1
Lj4g0015145 Lotus japonicus HOM05D003533 ORTHO05D004009 4.8e-13 77.8 90 47.8
QL10p012332 Quercus lobata HOM05D003533 ORTHO05D004009 4.8e-13 77.8 87 48.3
TAR622G1413 Trochodendron aralioides HOM05D003533 ORTHO05D004009 4.8e-13 77.8 88 47.7
CANSAT54G2961 Cannabis sativa HOM05D003533 ORTHO05D004009 6.3e-13 77.4 84 48.8
Thhalv10010873m.g Eutrema salsugineum HOM05D003533 ORTHO05D004009 8.2e-13 77.0 80 62.5
unitig_62.g23572 Utricularia gibba HOM05D006519 ORTHO05D008306 1.4e-12 76.3 80 50.0
Nitab4.5_0002059g0100 Nicotiana tabacum HOM05D003533 ORTHO05D004009 1.8e-12 75.9 95 44.2
Medtr4g106500 Medicago truncatula HOM05D003533 ORTHO05D004009 2.4e-12 75.5 91 45.1
Nitab4.5_0002059g0090 Nicotiana tabacum HOM05D003533 ORTHO05D004009 2.4e-12 75.5 95 45.3
Oeu005054.1 Olea europaea HOM05D003533 ORTHO05D004009 2.4e-12 75.5 78 51.3
CSS0013527 Camellia sinensis var. sinensis HOM05D003533 ORTHO05D004009 3.1e-12 75.1 88 48.9
CSS0016862 Camellia sinensis var. sinensis HOM05D003533 ORTHO05D004009 3.1e-12 75.1 88 48.9
Oeu017591.1 Olea europaea HOM05D003533 ORTHO05D004009 4.1e-12 74.7 84 45.2
Hma1.2p1_0002F.1_g002860 Hydrangea macrophylla HOM05D003533 ORTHO05D004009 5.3e-12 74.3 85 47.1
Manes.14G070400 Manihot esculenta HOM05D003533 ORTHO05D004009 5.3e-12 74.3 85 47.1
Rhsim12G0161500 Rhododendron simsii HOM05D003533 ORTHO05D004009 5.3e-12 74.3 90 45.6
RcHm_v2.0_Chr4g0444801 Rosa chinensis HOM05D003533 ORTHO05D004009 5.3e-12 74.3 86 47.7
HanXRQChr09g0237871 Helianthus annuus HOM05D003533 ORTHO05D004009 9.1e-12 73.6 83 48.2
Aqoxy3G03117 Aquilegia oxysepala HOM05D003533 ORTHO05D004009 1.2e-11 73.2 91 53.8
COL.COLO4_37881 Corchorus olitorius HOM05D003533 ORTHO05D004009 1.2e-11 73.2 86 45.3
FAN22G0766 Fragaria x ananassa HOM05D003533 ORTHO05D004009 1.2e-11 73.2 86 47.7
Gohir.A05G319400 Gossypium hirsutum HOM05D003533 ORTHO05D004009 1.2e-11 73.2 86 44.2
Gohir.D05G321600 Gossypium hirsutum HOM05D003533 ORTHO05D004009 1.2e-11 73.2 86 44.2
Gorai.009G345100 Gossypium raimondii HOM05D003533 ORTHO05D004009 1.2e-11 73.2 86 44.2
TWI15G0955 Tripterygium wilfordii HOM05D003533 ORTHO05D004009 1.5e-11 72.8 88 44.3
TWI81G0654 Tripterygium wilfordii HOM05D003533 ORTHO05D004009 1.5e-11 72.8 84 46.4
FvH4_4g35190 Fragaria vesca HOM05D003533 ORTHO05D004009 2.6e-11 72.0 86 47.7
Nitab4.5_0002312g0100 Nicotiana tabacum HOM05D003533 ORTHO05D004009 2.6e-11 72.0 95 43.2
Sp5g13860 Schrenkiella parvula HOM05D003533 ORTHO05D004009 2.6e-11 72.0 82 52.4
Cc11_g14120 Coffea canephora HOM05D003533 ORTHO05D004009 3.4e-11 71.6 85 54.1
Glyma.05G033600 Glycine max HOM05D003533 ORTHO05D004009 3.4e-11 71.6 91 45.1
Migut.I00058 Erythranthe guttata HOM05D003533 ORTHO05D004009 4.5e-11 71.2 75 50.7
CiPaw.12G022900 Carya illinoinensis HOM05D003533 ORTHO05D004009 7.7e-11 70.5 88 44.3
FAN12G1992 Fragaria x ananassa HOM05D003533 ORTHO05D004009 7.7e-11 70.5 86 46.5
Glyma.17G093500 Glycine max HOM05D003533 ORTHO05D004009 7.7e-11 70.5 94 44.7
MD16G1084900 Malus domestica HOM05D003533 ORTHO05D004009 7.7e-11 70.5 83 45.8
Prupe.1G261100 Prunus persica HOM05D003533 ORTHO05D004009 7.7e-11 70.5 88 45.5
Carub.0005s1428 Capsella rubella HOM05D003533 ORTHO05D004009 1.0e-10 70.1 82 46.3
MELO3C017124.2 Cucumis melo HOM05D003533 ORTHO05D004009 1.0e-10 70.1 83 45.8
FAN07G1024 Fragaria x ananassa HOM05D003533 ORTHO05D004009 1.0e-10 70.1 86 46.5
Lsat_1_v5_gn_1_11280 Lactuca sativa HOM05D003533 ORTHO05D004009 1.0e-10 70.1 83 43.4
Prupe.5G179600 Prunus persica HOM05D003533 ORTHO05D004009 1.0e-10 70.1 85 48.2
AL5G27512 Arabidopsis lyrata HOM05D003533 ORTHO05D004009 1.3e-10 69.7 81 49.4
FAN17G1844 Fragaria x ananassa HOM05D003533 ORTHO05D004009 1.3e-10 69.7 86 45.3
Aa31LG4G16780 Aethionema arabicum HOM05D003533 ORTHO05D004009 1.7e-10 69.3 82 59.8
CARHR019640 Cardamine hirsuta HOM05D003533 ORTHO05D004009 1.7e-10 69.3 80 47.5
Cc11_g14110 Coffea canephora HOM05D003533 ORTHO05D004009 1.7e-10 69.3 83 42.2
Eucgr.K02881 Eucalyptus grandis HOM05D003533 ORTHO05D004009 2.2e-10 68.9 87 41.4
Nitab4.5_0002312g0110 Nicotiana tabacum HOM05D003533 ORTHO05D004009 2.2e-10 68.9 96 42.7
CiPaw.11G032200 Carya illinoinensis HOM05D003533 ORTHO05D004009 2.9e-10 68.6 89 47.2
Lj1g0014022 Lotus japonicus HOM05D003533 ORTHO05D004009 2.9e-10 68.6 86 45.3
MD06G1181300 Malus domestica HOM05D003533 ORTHO05D004009 2.9e-10 68.6 91 48.4
Oeu005690.1 Olea europaea HOM05D003533 ORTHO05D004009 2.9e-10 68.6 78 46.2
A09p59550 Brassica napus HOM05D003533 ORTHO05D004009 3.8e-10 68.2 82 42.7
MD14G1187200 Malus domestica HOM05D003533 ORTHO05D004009 3.8e-10 68.2 84 45.2
A06p15230 Brassica napus HOM05D003533 ORTHO05D004009 5.0e-10 67.8 83 57.8
BraA06t24637Z Brassica rapa HOM05D003533 ORTHO05D004009 5.0e-10 67.8 83 57.8
MBI14_g31147_MAGBIO Magnolia biondii HOM05D003533 ORTHO05D004009 5.0e-10 67.8 83 42.2
vmacro16587 Vaccinium macrocarpon HOM05D003533 ORTHO05D004009 5.0e-10 67.8 91 42.9
BcaB07g31922 Brassica carinata HOM05D003533 ORTHO05D004009 6.5e-10 67.4 82 43.9
Glyma.04G178500 Glycine max HOM05D003533 ORTHO05D004009 6.5e-10 67.4 83 44.6
PSO013G0048 Papaver somniferum HOM05D003533 ORTHO05D004009 6.5e-10 67.4 83 47.0
Psat0s489g0040 Pisum sativum HOM05D003533 ORTHO05D004009 6.5e-10 67.4 86 43.0
BcaB03g14468 Brassica carinata HOM05D003533 ORTHO05D004009 8.5e-10 67.0 81 42.0
Phvul.009G182200 Phaseolus vulgaris HOM05D003533 ORTHO05D004009 8.5e-10 67.0 83 44.6
Solyc05g006390.1 Solanum lycopersicum HOM05D003533 ORTHO05D004009 8.5e-10 67.0 89 43.8
Sopen05g002310 Solanum pennellii HOM05D003533 ORTHO05D004009 8.5e-10 67.0 89 43.8
BcaB03g12939 Brassica carinata HOM05D003533 ORTHO05D004009 1.1e-09 66.6 84 42.9
Hma1.2p1_0160F.1_g070540 Hydrangea macrophylla HOM05D003533 ORTHO05D004009 1.1e-09 66.6 91 40.7
Migut.L01388 Erythranthe guttata HOM05D003533 ORTHO05D004009 1.9e-09 65.9 86 44.2
FAN18G0586 Fragaria x ananassa HOM05D003533 ORTHO05D004009 1.9e-09 65.9 81 48.1
Lalb_Chr12g0201361 Lupinus albus HOM05D003533 ORTHO05D004009 1.9e-09 65.9 85 45.9
Phvul.003G196800 Phaseolus vulgaris HOM05D003533 ORTHO05D004009 1.9e-09 65.9 94 42.6
AT1G19020 Arabidopsis thaliana HOM05D003533 ORTHO05D004009 2.5e-09 65.5 84 42.9
EL10Ac5g10833 Beta vulgaris HOM05D003533 ORTHO05D004009 2.5e-09 65.5 68 60.3
Thecc.02G240400 Theobroma cacao HOM05D003533 ORTHO05D004009 2.5e-09 65.5 79 45.6
BcaC07g41276 Brassica carinata HOM05D003533 ORTHO05D004009 3.2e-09 65.1 84 54.8
Hma1.2p1_0572F.1_g180980 Hydrangea macrophylla HOM05D003533 ORTHO05D004009 4.2e-09 64.7 85 43.5
AL1G31580 Arabidopsis lyrata HOM05D003533 ORTHO05D004009 5.5e-09 64.3 82 42.7
Cfa009093 Carpinus fangiana HOM05D003533 ORTHO05D004009 7.2e-09 63.9 81 43.2
DCAR_026103 Daucus carota HOM05D003533 ORTHO05D004009 7.2e-09 63.9 88 45.5
Eucgr.B00337 Eucalyptus grandis HOM05D003533 ORTHO05D004009 7.2e-09 63.9 91 41.8
TPR.G37447 Trifolium pratense HOM05D003533 ORTHO05D004009 7.2e-09 63.9 89 41.6
COL.COLO4_21432 Corchorus olitorius HOM05D003533 ORTHO05D004009 9.4e-09 63.5 80 43.8
Medtr3g078420 Medicago truncatula HOM05D003533 ORTHO05D004009 1.2e-08 63.2 87 41.4
PSO013G0065 Papaver somniferum HOM05D003533 ORTHO05D004009 1.2e-08 63.2 94 42.6
TPR.G31485 Trifolium pratense HOM05D003533 ORTHO05D004009 1.2e-08 63.2 87 40.2
Lalb_Chr12g0201351 Lupinus albus HOM05D003533 ORTHO05D004009 1.6e-08 62.8 85 41.2
Sed0002579 Sechium edule HOM05D003533 ORTHO05D004009 1.6e-08 62.8 91 41.8
Sp1g16980 Schrenkiella parvula HOM05D003533 ORTHO05D004009 2.1e-08 62.4 85 44.7
CAN.G159.12 Capsicum annuum HOM05D003533 ORTHO05D004009 2.7e-08 62.0 87 40.2
PGSC0003DMG400022647 Solanum tuberosum HOM05D003533 ORTHO05D004009 2.7e-08 62.0 91 38.5
Glyma.06G186200 Glycine max HOM05D003533 ORTHO05D004009 3.6e-08 61.6 83 41.0
MBI14_g31145_MAGBIO Magnolia biondii HOM05D003533 ORTHO05D004009 3.6e-08 61.6 89 37.1
Actinidia19080 Actinidia chinensis HOM05D003533 ORTHO05D004009 4.7e-08 61.2 49 59.2
Thhalv10009213m.g Eutrema salsugineum HOM05D003533 ORTHO05D004009 4.7e-08 61.2 85 55.3
BolC8t49535H Brassica oleracea HOM05D003533 ORTHO05D004009 6.1e-08 60.8 47 57.4
Ca_16210_v3 Cicer arietinum L. HOM05D003533 ORTHO05D004009 7.9e-08 60.5 86 39.5
Nitab4.5_0003386g0040 Nicotiana tabacum HOM05D003533 ORTHO05D004009 7.9e-08 60.5 86 45.3
A08p30040 Brassica napus HOM05D003533 ORTHO05D004009 1.0e-07 60.1 79 41.8
BraA08t34939Z Brassica rapa HOM05D003533 ORTHO05D004009 1.0e-07 60.1 79 41.8
FAN13G2147 Fragaria x ananassa HOM05D003533 ORTHO05D004009 1.0e-07 60.1 81 44.4
BcaC05g25801 Brassica carinata HOM05D003533 ORTHO05D004009 1.4e-07 59.7 82 56.1
BcaC05g25802 Brassica carinata HOM05D003533 ORTHO05D004009 1.4e-07 59.7 82 56.1
C05p17410 Brassica napus HOM05D003533 ORTHO05D004009 1.4e-07 59.7 82 56.1
C08p19120 Brassica napus HOM05D003533 ORTHO05D004009 1.4e-07 59.7 47 57.4
BolC5t30441H Brassica oleracea HOM05D003533 ORTHO05D004009 1.4e-07 59.7 82 56.1
CARHR156900 Cardamine hirsuta HOM05D003533 ORTHO05D004009 1.4e-07 59.7 82 52.4
Ciclev10033215m.g Citrus clementina HOM05D003533 ORTHO05D004009 1.4e-07 59.7 83 39.8
MBI14_g31148_MAGBIO Magnolia biondii HOM05D003533 ORTHO05D011084 1.4e-07 59.7 76 40.8
Aa31LG7G3800 Aethionema arabicum HOM05D006783 ORTHO05D008330 1.8e-07 59.3 71 40.8
Solyc03g113810.1 Solanum lycopersicum HOM05D003533 ORTHO05D004009 1.8e-07 59.3 83 43.4
Atru.chr11.1939 Acer truncatum HOM05D003533 ORTHO05D004009 2.3e-07 58.9 78 39.7
C08p42830 Brassica napus HOM05D003533 ORTHO05D004009 2.3e-07 58.9 81 42.0
BolC8t51839H Brassica oleracea HOM05D003533 ORTHO05D004009 2.3e-07 58.9 81 42.0
Zm00001eb254120 Zea mays HOM05D003533 ORTHO05D004009 2.3e-07 58.9 83 38.6
DCAR_016506 Daucus carota HOM05D003533 ORTHO05D004009 3.0e-07 58.5 86 38.4
SalBow2G1603 Salvia bowleyana HOM05D003533 ORTHO05D004009 3.0e-07 58.5 85 36.5
SalBow2G3186 Salvia bowleyana HOM05D003533 ORTHO05D004009 3.0e-07 58.5 85 36.5
Sopen03g032860 Solanum pennellii HOM05D003533 ORTHO05D004009 3.0e-07 58.5 83 42.2
BraA09t41332Z Brassica rapa HOM05D003533 ORTHO05D004009 3.9e-07 58.2 81 42.0
Rhsim12G0161400 Rhododendron simsii HOM05D003533 ORTHO05D004009 3.9e-07 58.2 81 40.7
SalBow5G4118 Salvia bowleyana HOM05D003533 ORTHO05D004009 3.9e-07 58.2 44 61.4
CDE07G1253 Ceratophyllum demersum HOM05D000502 ORTHO05D000356 5.1e-07 57.8 47 55.3
Lsat_1_v5_gn_1_11220 Lactuca sativa HOM05D003533 ORTHO05D004009 5.1e-07 57.8 89 37.1
PGR083G0433 Punica granatum HOM05D003533 ORTHO05D004009 5.1e-07 57.8 89 39.3
HanXRQChr09g0271891 Helianthus annuus HOM05D003533 ORTHO05D004009 8.8e-07 57.0 47 51.1
Rhsim12G0161300 Rhododendron simsii HOM05D003533 ORTHO05D004009 8.8e-07 57.0 77 40.3
CsaV3_1G001820 Cucumis sativus L. HOM05D003533 ORTHO05D004009 1.1e-06 56.6 84 36.9
HanXRQChr04g0107311 Helianthus annuus HOM05D003533 ORTHO05D004009 2.0e-06 55.8 44 52.3
Oeu060842.1 Olea europaea HOM05D003533 ORTHO05D004009 2.6e-06 55.5 81 38.3
Os02g0740600 Oryza sativa ssp. japonica HOM05D003533 ORTHO05D004009 2.6e-06 55.5 81 37.0
BraA06t25683Z Brassica rapa HOM05D013399 ORTHO05D004009 4.4e-06 54.7 78 44.9
PGSC0003DMG400024583 Solanum tuberosum HOM05D003533 ORTHO05D004009 4.4e-06 54.7 83 41.0
Migut.E00134 Erythranthe guttata HOM05D003533 ORTHO05D004009 7.4e-06 53.9 81 37.0
unitig_22.g6479 Utricularia gibba HOM05D003533 ORTHO05D004009 7.4e-06 53.9 80 35.0
CSS0048422 Camellia sinensis var. sinensis HOM05D003533 ORTHO05D004009 9.7e-06 53.5 94 37.2


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