Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sc04g0001930 Simmondsia chinensis HOM05D007441 ORTHO05D009501 1.9e-104 382.5 194 100.0
Glyma.17G091300 Glycine max HOM05D007441 ORTHO05D009501 4.4e-56 221.9 177 62.1
GSVIVG01007790001 Vitis vinifera HOM05D007441 ORTHO05D009501 5.7e-56 221.5 172 65.1
QL10p013655 Quercus lobata HOM05D007441 ORTHO05D009501 2.8e-55 219.2 178 62.4
Hma1.2p1_0176F.1_g077710 Hydrangea macrophylla HOM05D007441 ORTHO05D009501 6.3e-55 218.0 184 63.0
Prupe.5G176500 Prunus persica HOM05D007441 ORTHO05D009501 6.3e-55 218.0 180 62.8
Duzib084G0400 Durio zibethinus HOM05D007441 ORTHO05D009501 8.3e-55 217.6 179 62.0
TWI15G0162 Tripterygium wilfordii HOM05D007441 ORTHO05D009501 8.3e-55 217.6 178 62.9
Lj4g0018861 Lotus japonicus HOM05D007441 ORTHO05D009501 1.6e-53 213.4 156 67.3
AUR62008240 Chenopodium quinoa HOM05D007441 ORTHO05D009501 2.0e-53 213.0 148 70.9
AUR62030992 Chenopodium quinoa HOM05D007441 ORTHO05D009501 4.5e-53 211.8 148 70.9
Ciclev10022460m.g Citrus clementina HOM05D007441 ORTHO05D009501 5.9e-53 211.5 173 62.4
FvH4_5g05090 Fragaria vesca HOM05D007441 ORTHO05D009501 5.9e-53 211.5 151 68.9
FAN18G4363 Fragaria x ananassa HOM05D007441 ORTHO05D009501 5.9e-53 211.5 151 68.9
Lj9A451T94 Lonicera japonica HOM05D007441 ORTHO05D009501 1.0e-52 210.7 147 68.0
CSS0037538 Camellia sinensis var. sinensis HOM05D007441 ORTHO05D009501 1.3e-52 210.3 145 71.0
MD14G1183800 Malus domestica HOM05D007441 ORTHO05D009501 2.3e-52 209.5 180 58.9
RcHm_v2.0_Chr7g0193911 Rosa chinensis HOM05D007441 ORTHO05D009501 2.3e-52 209.5 178 59.6
VMungo1215G1307 Vigna mungo HOM05D007441 ORTHO05D009501 2.3e-52 209.5 174 60.3
FAN04G2715 Fragaria x ananassa HOM05D007441 ORTHO05D009501 5.0e-52 208.4 151 67.5
Phvul.003G198700 Phaseolus vulgaris HOM05D007441 ORTHO05D009501 5.0e-52 208.4 173 60.7
Hund02733 Selenicereus undatus HOM05D007441 ORTHO05D009501 5.0e-52 208.4 150 68.7
CiPaw.11G029400 Carya illinoinensis HOM05D007441 ORTHO05D009501 1.9e-51 206.5 147 68.0
FAN13G3077 Fragaria x ananassa HOM05D007441 ORTHO05D009501 4.3e-51 205.3 151 66.2
arahy.Tifrunner.gnm1.ann1.DR4P4T Arachis hypogaea HOM05D007441 ORTHO05D009501 5.6e-51 204.9 139 69.8
Actinidia19093 Actinidia chinensis HOM05D007441 ORTHO05D009501 7.3e-51 204.5 165 62.4
Lsat_1_v5_gn_1_26521 Lactuca sativa HOM05D007441 ORTHO05D009501 9.5e-51 204.1 141 71.6
arahy.Tifrunner.gnm1.ann1.01HJP6 Arachis hypogaea HOM05D007441 ORTHO05D009501 2.1e-50 203.0 167 62.3
Dinv20676 Davidia involucrata HOM05D007441 ORTHO05D009501 2.1e-50 203.0 185 58.9
Duzib205G0170 Durio zibethinus HOM05D007441 ORTHO05D009501 2.1e-50 203.0 180 58.9
Manes.06G102900 Manihot esculenta HOM05D007441 ORTHO05D009501 3.6e-50 202.2 141 70.2
Potri.012G078400 Populus trichocarpa HOM05D007441 ORTHO05D009501 4.7e-50 201.8 139 70.5
ECA247G2439 Erigeron canadensis HOM05D007441 ORTHO05D009501 2.3e-49 199.5 139 68.3
Lalb_Chr07g0182651 Lupinus albus HOM05D007441 ORTHO05D009501 4.0e-49 198.7 145 69.0
Thecc.03G008500 Theobroma cacao HOM05D007441 ORTHO05D009501 5.2e-49 198.4 173 60.1
Ca_21905_v3 Cicer arietinum L. HOM05D007441 ORTHO05D009501 1.2e-48 197.2 145 70.3
Ca_21923_v3 Cicer arietinum L. HOM05D007441 ORTHO05D009501 1.2e-48 197.2 145 70.3
Medtr4g106640 Medicago truncatula HOM05D007441 ORTHO05D009501 9.8e-48 194.1 181 59.1
PGR044G0794 Punica granatum HOM05D007441 ORTHO05D009501 9.8e-48 194.1 173 57.8
Sabra12G0056200 Salix brachista HOM05D007441 ORTHO05D009501 9.8e-48 194.1 141 66.7
THA.LOC104809273 Tarenaya hassleriana HOM05D007441 ORTHO05D009501 9.8e-48 194.1 173 59.0
TAR622G1175 Trochodendron aralioides HOM05D007441 ORTHO05D009501 9.8e-48 194.1 183 57.4
Oeu016356.1 Olea europaea HOM05D007441 ORTHO05D009501 1.7e-47 193.4 141 66.0
Potri.015G073900 Populus trichocarpa HOM05D007441 ORTHO05D009501 6.4e-47 191.4 169 61.5
Psat4g057000 Pisum sativum HOM05D007441 ORTHO05D009501 8.3e-47 191.0 157 63.7
Atru.chr9.2436 Acer truncatum HOM05D007441 ORTHO05D009501 3.2e-46 189.1 177 57.6
Nitab4.5_0006831g0010 Nicotiana tabacum HOM05D007441 ORTHO05D009501 5.4e-46 188.3 176 59.1
Rhsim12G0163200 Rhododendron simsii HOM05D007441 ORTHO05D009501 7.0e-46 188.0 152 61.2
EL10Ac5g10787 Beta vulgaris HOM05D007441 ORTHO05D009501 9.2e-46 187.6 125 72.8
Cpa.g.sc124.33 Carica papaya HOM05D007441 ORTHO05D009501 1.2e-45 187.2 178 56.2
SGA_v2.0_scaffold90G27976 Striga asiatica HOM05D007441 ORTHO05D009501 1.6e-45 186.8 181 56.4
Sopen03g033180 Solanum pennellii HOM05D007441 ORTHO05D009501 2.0e-45 186.4 179 57.0
Solyc03g114120.3 Solanum lycopersicum HOM05D007441 ORTHO05D009501 2.7e-45 186.0 175 57.7
CANSAT80G2614 Cannabis sativa HOM05D007441 ORTHO05D009501 3.5e-45 185.7 143 65.7
Sp1g23350 Schrenkiella parvula HOM05D007441 ORTHO05D009501 3.5e-45 185.7 156 59.6
Carub.0001s2566 Capsella rubella HOM05D007441 ORTHO05D009501 4.6e-45 185.3 153 62.1
TPR.G37479 Trifolium pratense HOM05D007441 ORTHO05D009501 4.6e-45 185.3 153 62.1
AL1G40490 Arabidopsis lyrata HOM05D007441 ORTHO05D009501 5.9e-45 184.9 139 64.0
PGSC0003DMG400024487 Solanum tuberosum HOM05D007441 ORTHO05D009501 5.9e-45 184.9 175 57.1
BcaC05g26717 Brassica carinata HOM05D007441 ORTHO05D009501 1.0e-44 184.1 147 63.3
C05p25830 Brassica napus HOM05D007441 ORTHO05D009501 1.0e-44 184.1 139 64.0
Aqoxy3G03040 Aquilegia oxysepala HOM05D007441 ORTHO05D009501 1.3e-44 183.7 149 61.7
PSO832G4588 Papaver somniferum HOM05D007441 ORTHO05D009501 3.0e-44 182.6 172 56.4
Haze_07488 Corylus avellana HOM05D007441 ORTHO05D009501 3.9e-44 182.2 180 55.6
SalBow5G3166 Salvia bowleyana HOM05D007441 ORTHO05D009501 3.9e-44 182.2 155 59.4
A09p38770 Brassica napus HOM05D007441 ORTHO05D009501 5.0e-44 181.8 139 64.0
BraA09t39385Z Brassica rapa HOM05D007441 ORTHO05D009501 5.0e-44 181.8 139 64.0
HanXRQChr02g0037211 Helianthus annuus HOM05D007441 ORTHO05D009501 5.0e-44 181.8 178 53.4
CARHR026680 Cardamine hirsuta HOM05D007441 ORTHO05D009501 8.6e-44 181.0 139 61.9
Nn4g22840 Nelumbo nucifera HOM05D007441 ORTHO05D009501 1.5e-43 180.3 180 52.8
AT1G24450 Arabidopsis thaliana HOM05D007441 ORTHO05D009501 1.9e-43 179.9 169 56.2
Nitab4.5_0010542g0040 Nicotiana tabacum HOM05D007441 ORTHO05D001268 2.5e-43 179.5 135 68.1
BolC5t31303H Brassica oleracea HOM05D007441 ORTHO05D009501 3.3e-43 179.1 156 57.7
MSTRG.23109 Avicennia marina HOM05D007441 ORTHO05D009501 4.7e-42 175.3 177 50.3
AUR62029952 Chenopodium quinoa HOM05D007441 ORTHO05D009501 4.7e-42 175.3 125 69.6
CAN.G4872.1 Capsicum annuum HOM05D007441 ORTHO05D009501 1.4e-41 173.7 201 52.7
Thhalv10008862m.g Eutrema salsugineum HOM05D007441 ORTHO05D009501 1.8e-41 173.3 139 60.4
Aa31LG7G9580 Aethionema arabicum HOM05D007441 ORTHO05D009501 3.1e-41 172.6 154 57.8
DCAR_031307 Daucus carota HOM05D007441 ORTHO05D009501 2.4e-38 162.9 119 67.2
BcaC05g26720 Brassica carinata HOM05D007441 ORTHO05D009501 3.5e-37 159.1 156 53.8
CAN.G781.35 Capsicum annuum HOM05D007441 ORTHO05D009501 1.3e-36 157.1 126 64.3
BcaC05g26525 Brassica carinata HOM05D007441 ORTHO05D009501 2.1e-34 149.8 129 57.4
Peaxi162Scf00017g00269 Petunia axillaris HOM05D007441 ORTHO05D009501 3.4e-32 142.5 113 63.7
BcaC06g35265 Brassica carinata HOM05D007441 ORTHO05D009501 5.8e-32 141.7 110 62.7
MBI15_g31106_MAGBIO Magnolia biondii HOM05D007441 ORTHO05D009501 2.2e-31 139.8 118 61.9
C07p18070 Brassica napus HOM05D007441 ORTHO05D009501 2.9e-31 139.4 110 61.8
ATR1149G031 Amborella trichopoda HOM05D007441 ORTHO05D009501 3.2e-30 136.0 146 48.6
AUR62039786 Chenopodium quinoa HOM05D007441 ORTHO05D009501 2.3e-28 129.8 119 59.7
Actinidia34944 Actinidia chinensis HOM05D007441 ORTHO05D009501 9.5e-27 124.4 94 61.7
Dinv09163 Davidia involucrata HOM05D007441 ORTHO05D009501 3.6e-26 122.5 124 54.0
Zm00001eb210540 Zea mays HOM05D007441 ORTHO05D009501 1.2e-24 117.5 140 44.3
BolC7t42316H Brassica oleracea HOM05D007441 ORTHO05D009501 3.4e-24 115.9 105 53.3
AUR62040474 Chenopodium quinoa HOM05D007441 ORTHO05D009501 2.2e-23 113.2 125 52.0
COL.COLO4_16923 Corchorus olitorius HOM05D007441 ORTHO05D009501 1.1e-19 100.9 91 54.9
Medtr4g079220 Medicago truncatula HOM05D007441 ORTHO05D009501 1.5e-19 100.5 105 56.2
CAN.G781.34 Capsicum annuum HOM05D007441 ORTHO05D009501 1.6e-18 97.1 74 66.2
SMO118G0028 Selaginella moellendorffii HOM05D007441 ORTHO05D009501 2.2e-15 86.7 125 38.4
SEGI_24388 Sequoiadendron giganteum HOM05D007441 ORTHO05D009501 2.9e-15 86.3 110 41.8
Migut.I00040 Erythranthe guttata HOM05D007441 ORTHO05D009501 3.8e-15 85.9 69 56.5
Os03g0854400 Oryza sativa ssp. japonica HOM05D007441 ORTHO05D009501 1.1e-14 84.3 139 37.4
HPP92_004711 Vanilla planifolia HOM05D007441 ORTHO05D009501 1.7e-12 77.0 92 44.6


User provided reference genes

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