Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sc04g0001910 Simmondsia chinensis HOM05D007596 ORTHO05D009672 3.6e-108 394.8 186 100.0
SGA_v2.0_scaffold90G27960 Striga asiatica HOM05D007596 ORTHO05D009672 2.5e-77 292.4 179 76.0
Dinv20674 Davidia involucrata HOM05D007596 ORTHO05D009672 2.8e-76 288.9 179 72.6
DCAR_026124 Daucus carota HOM05D007596 ORTHO05D009672 4.8e-76 288.1 179 73.7
EL10Ac5g10784 Beta vulgaris HOM05D007596 ORTHO05D009672 8.2e-76 287.3 179 73.2
GSVIVG01007788001 Vitis vinifera HOM05D007596 ORTHO05D009672 4.0e-75 285.0 179 73.7
Migut.I00032 Erythranthe guttata HOM05D007596 ORTHO05D009672 5.3e-75 284.6 179 73.7
Rhsim12G0163300 Rhododendron simsii HOM05D007596 ORTHO05D009672 9.0e-75 283.9 179 71.5
Lj9A451T97 Lonicera japonica HOM05D007596 ORTHO05D009672 1.7e-73 279.6 179 71.5
Nn4g22825 Nelumbo nucifera HOM05D007596 ORTHO05D009672 1.7e-73 279.6 179 72.1
SalBow5G3112 Salvia bowleyana HOM05D007596 ORTHO05D009672 1.7e-73 279.6 179 72.6
HanXRQChr16g0503661 Helianthus annuus HOM05D007596 ORTHO05D009672 2.9e-73 278.9 179 73.2
Oeu041561.1 Olea europaea HOM05D007596 ORTHO05D009672 2.9e-73 278.9 179 70.4
Aqoxy3G00967 Aquilegia oxysepala HOM05D007596 ORTHO05D009672 3.8e-73 278.5 179 72.6
Hund02735 Selenicereus undatus HOM05D007596 ORTHO05D009672 4.9e-73 278.1 179 73.7
vmacro16599 Vaccinium macrocarpon HOM05D007596 ORTHO05D009672 1.9e-72 276.2 179 72.1
PSO063G6591 Papaver somniferum HOM05D007596 ORTHO05D009672 3.2e-72 275.4 179 69.8
PSO832G1789 Papaver somniferum HOM05D007596 ORTHO05D009672 3.2e-72 275.4 179 69.8
MBI15_g31109_MAGBIO Magnolia biondii HOM05D007596 ORTHO05D009672 9.3e-72 273.9 179 72.1
CiPaw.11G029100 Carya illinoinensis HOM05D007596 ORTHO05D009672 1.2e-71 273.5 179 69.8
Cc04_g12800 Coffea canephora HOM05D007596 ORTHO05D009672 1.2e-71 273.5 179 69.8
ECA232G2922 Erigeron canadensis HOM05D007596 ORTHO05D009672 1.6e-71 273.1 179 70.4
MSTRG.11436 Avicennia marina HOM05D007596 ORTHO05D009672 3.5e-71 271.9 179 72.1
CANSAT80G2510 Cannabis sativa HOM05D007596 ORTHO05D009672 3.5e-71 271.9 179 69.3
TAR374G1438 Trochodendron aralioides HOM05D007596 ORTHO05D009672 4.6e-71 271.6 179 69.3
CSS0015692 Camellia sinensis var. sinensis HOM05D007596 ORTHO05D009672 1.8e-70 269.6 179 68.2
PGSC0003DMG400027097 Solanum tuberosum HOM05D007596 ORTHO05D009672 1.8e-70 269.6 179 71.5
Sopen06g027660 Solanum pennellii HOM05D007596 ORTHO05D009672 5.1e-70 268.1 179 70.9
Nitab4.5_0000003g0490 Nicotiana tabacum HOM05D007596 ORTHO05D009672 6.7e-70 267.7 179 68.7
Hma1.2p1_0701F.1_g205970 Hydrangea macrophylla HOM05D007596 ORTHO05D009672 8.7e-70 267.3 183 68.9
Nitab4.5_0007803g0020 Nicotiana tabacum HOM05D007596 ORTHO05D009672 4.3e-69 265.0 179 68.7
Solyc06g071380.3 Solanum lycopersicum HOM05D007596 ORTHO05D009672 4.3e-69 265.0 179 69.8
TWI15G1048 Tripterygium wilfordii HOM05D007596 ORTHO05D009672 4.3e-69 265.0 179 68.7
Sed0010804 Sechium edule HOM05D007596 ORTHO05D009672 7.4e-69 264.2 179 69.3
Duzib205G0154 Durio zibethinus HOM05D007596 ORTHO05D009672 9.7e-69 263.8 179 67.0
Eucgr.K02859 Eucalyptus grandis HOM05D007596 ORTHO05D009672 2.8e-68 262.3 185 67.6
HPP92_019181 Vanilla planifolia HOM05D007596 ORTHO05D009672 2.8e-68 262.3 182 66.5
Atru.chr9.2439 Acer truncatum HOM05D007596 ORTHO05D009672 3.7e-68 261.9 179 68.2
ATR0691G114 Amborella trichopoda HOM05D007596 ORTHO05D009672 3.7e-68 261.9 179 66.5
Thecc.03G008700 Theobroma cacao HOM05D007596 ORTHO05D009672 9.0e-67 257.3 179 65.9
CsaV3_1G008350 Cucumis sativus L. HOM05D007596 ORTHO05D009672 3.4e-66 255.4 179 67.6
MD06G1177600 Malus domestica HOM05D007596 ORTHO05D009672 7.7e-66 254.2 179 66.5
ClCG01G013000 Citrullus lanatus HOM05D007596 ORTHO05D009672 1.3e-65 253.4 179 65.9
Potri.012G078600 Populus trichocarpa HOM05D007596 ORTHO05D009672 1.7e-65 253.1 180 65.0
FAN08G2413 Fragaria x ananassa HOM05D007596 ORTHO05D009672 5.0e-65 251.5 180 65.6
FAN13G0067 Fragaria x ananassa HOM05D007596 ORTHO05D009672 5.0e-65 251.5 180 65.6
FAN18G0106 Fragaria x ananassa HOM05D007596 ORTHO05D009672 8.5e-65 250.8 180 65.6
FvH4_5g05110 Fragaria vesca HOM05D007596 ORTHO05D009672 1.1e-64 250.4 180 65.0
Prupe.5G176300 Prunus persica HOM05D007596 ORTHO05D009672 1.1e-64 250.4 178 67.4
Manes.06G103100 Manihot esculenta HOM05D007596 ORTHO05D009672 1.9e-64 249.6 180 65.0
RcHm_v2.0_Chr7g0193891 Rosa chinensis HOM05D007596 ORTHO05D009672 1.9e-64 249.6 180 65.6
Lalb_Chr13g0297881 Lupinus albus HOM05D007596 ORTHO05D009672 4.2e-64 248.4 180 62.8
Gorai.006G187000 Gossypium raimondii HOM05D007596 ORTHO05D009672 1.2e-63 246.9 179 65.4
Ciclev10021737m.g Citrus clementina HOM05D007596 ORTHO05D009672 1.6e-63 246.5 179 66.5
Gohir.A09G169500 Gossypium hirsutum HOM05D007596 ORTHO05D009672 4.6e-63 245.0 179 64.8
Lj4g0018893 Lotus japonicus HOM05D007596 ORTHO05D009672 7.9e-63 244.2 180 62.8
Psat4g056920 Pisum sativum HOM05D007596 ORTHO05D009672 2.3e-62 242.7 182 63.7
PGR044G0668 Punica granatum HOM05D007596 ORTHO05D009672 8.8e-62 240.7 183 62.8
Glyma.05G036200 Glycine max HOM05D007596 ORTHO05D009672 4.3e-61 238.4 180 62.8
Zm00001eb080350 Zea mays HOM05D007596 ORTHO05D009672 1.1e-59 233.8 181 62.4
Medtr4g106630 Medicago truncatula HOM05D007596 ORTHO05D009672 1.8e-59 233.0 180 62.8
Phvul.003G198900 Phaseolus vulgaris HOM05D007596 ORTHO05D009672 1.2e-58 230.3 180 60.6
arahy.Tifrunner.gnm1.ann1.3E9X4W Arachis hypogaea HOM05D007596 ORTHO05D009672 5.9e-58 228.0 180 61.7
Sabra12G0056400 Salix brachista HOM05D007596 ORTHO05D009672 7.7e-58 227.6 222 51.4
FAN18G0038 Fragaria x ananassa HOM05D007596 ORTHO05D009672 1.7e-57 226.5 172 62.2
arahy.Tifrunner.gnm1.ann1.8F9XT7 Arachis hypogaea HOM05D007596 ORTHO05D009672 2.2e-57 226.1 180 61.1
Lsat_1_v5_gn_4_73100 Lactuca sativa HOM05D007596 ORTHO05D009672 6.5e-57 224.6 179 60.3
Os04g0465800 Oryza sativa ssp. japonica HOM05D007596 ORTHO05D009672 1.4e-56 223.4 184 58.2
Ca_21906_v3 Cicer arietinum L. HOM05D007596 ORTHO05D009672 1.9e-56 223.0 173 63.0
Ca_21924_v3 Cicer arietinum L. HOM05D007596 ORTHO05D009672 1.9e-56 223.0 173 63.0
COL.COLO4_34057 Corchorus olitorius HOM05D007596 ORTHO05D009672 2.3e-54 216.1 183 59.0
VMungo1215G2651 Vigna mungo HOM05D007596 ORTHO05D009672 3.9e-54 215.3 167 59.9
TPR.G37562 Trifolium pratense HOM05D007596 ORTHO05D009672 8.8e-54 214.2 164 63.4
Psat4g101560 Pisum sativum HOM05D007596 ORTHO05D009672 3.3e-53 212.2 180 58.9
Peaxi162Scf00689g00036 Petunia axillaris HOM05D007596 ORTHO05D009672 5.7e-53 211.5 179 58.1
SMO347G0014 Selaginella moellendorffii HOM05D007596 ORTHO05D009672 2.2e-52 209.5 179 54.7
SGA_v2.0_scaffold90G27962 Striga asiatica HOM05D007596 ORTHO05D009672 2.8e-52 209.1 161 63.4
Ah.13g077910 Amaranthus hybridus HOM05D007596 ORTHO05D004562 4.8e-52 208.4 181 57.5
Cfa019092 Carpinus fangiana HOM05D007596 ORTHO05D009672 1.9e-48 196.4 136 69.9
QL10p012241 Quercus lobata HOM05D007596 ORTHO05D009672 1.0e-46 190.7 132 65.2
Gohir.D09G165200 Gossypium hirsutum HOM05D007596 ORTHO05D009672 1.1e-45 187.2 179 53.1
Haze_07490 Corylus avellana HOM05D007596 ORTHO05D009672 6.1e-39 164.9 131 61.1
unitig_26.g8797 Utricularia gibba HOM05D007596 ORTHO05D009672 1.0e-33 147.5 184 45.7
COL.COLO4_33480 Corchorus olitorius HOM05D007596 ORTHO05D009672 6.1e-31 138.3 106 60.4
FAN04G0664 Fragaria x ananassa HOM05D007596 ORTHO05D009672 1.2e-29 134.0 128 52.3
Sc11g0005570 Simmondsia chinensis HOM05D007596 ORTHO05D009672 4.1e-27 125.6 61 91.8
Sc11g0005890 Simmondsia chinensis HOM05D007596 ORTHO05D009672 1.2e-26 124.0 60 93.3
FvH4_5g16630 Fragaria vesca HOM05D007596 ORTHO05D009672 6.8e-22 108.2 180 36.7
FAN18G2080 Fragaria x ananassa HOM05D007596 ORTHO05D009672 2.0e-21 106.7 180 36.7
Cpa.g.c40406 Carica papaya HOM05D007596 ORTHO05D009672 5.7e-21 105.1 97 54.6
SGA_v2.0_scaffold90G27974 Striga asiatica HOM05D001155 ORTHO05D001080 1.4e-19 100.5 92 54.3
Glyma.17G091200 Glycine max HOM05D007596 ORTHO05D009672 2.5e-16 89.7 119 42.0
SGA_v2.0_scaffold90G27967 Striga asiatica HOM05D007596 ORTHO05D009672 9.5e-16 87.8 75 60.0
EL10Ac4g09605 Beta vulgaris HOM05D004918 ORTHO05D005706 3.6e-15 85.9 110 43.6
CBR_g18641 Chara braunii HOM05D007596 ORTHO05D009672 1.4e-14 84.0 72 55.6
CiPaw.11G029000 Carya illinoinensis HOM05D007596 ORTHO05D009672 5.2e-14 82.0 47 74.5
AUR62030990 Chenopodium quinoa HOM05D007596 ORTHO05D009672 1.5e-13 80.5 48 68.8


User provided reference genes

Program Settings