Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sc04g0000850 Simmondsia chinensis HOM05D005518 ORTHO05D001269 3.6e-286 987.6 532 100.0
Hund02416 Selenicereus undatus HOM05D005518 ORTHO05D001269 1.3e-126 457.6 545 55.2
AUR62025869 Chenopodium quinoa HOM05D005518 ORTHO05D001269 3.2e-109 399.8 589 46.2
AUR62029840 Chenopodium quinoa HOM05D005518 ORTHO05D001269 2.7e-108 396.7 612 45.8
EL10As4g23466 Beta vulgaris HOM05D005518 ORTHO05D001269 4.1e-104 382.9 561 47.8
GSVIVG01003640001 Vitis vinifera HOM05D005518 ORTHO05D001269 1.0e-94 351.7 574 44.4
Cpa.g.sc4.97 Carica papaya HOM05D005518 ORTHO05D001269 6.8e-91 339.0 592 44.1
Dinv04847 Davidia involucrata HOM05D005518 ORTHO05D001269 1.3e-89 334.7 594 41.9
FAN13G1318 Fragaria x ananassa HOM05D005518 ORTHO05D001269 1.0e-86 325.1 592 43.6
Eucgr.K02750 Eucalyptus grandis HOM05D005518 ORTHO05D001269 3.8e-86 323.2 598 44.5
PGR044G0025 Punica granatum HOM05D005518 ORTHO05D001269 6.5e-86 322.4 585 43.8
TAR626G1948 Trochodendron aralioides HOM05D005518 ORTHO05D001269 6.5e-86 322.4 603 42.3
RcHm_v2.0_Chr7g0190821 Rosa chinensis HOM05D005518 ORTHO05D001269 3.2e-85 320.1 587 43.1
Actinidia16187 Actinidia chinensis HOM05D005518 ORTHO05D001269 5.5e-85 319.3 586 41.5
CiPaw.12G036400 Carya illinoinensis HOM05D005518 ORTHO05D001269 9.4e-85 318.5 589 43.1
Duzib205G1346 Durio zibethinus HOM05D005518 ORTHO05D001269 1.2e-84 318.2 608 42.1
QL10p004779 Quercus lobata HOM05D005518 ORTHO05D001269 6.1e-84 315.8 610 43.3
Thecc.03G124400 Theobroma cacao HOM05D005518 ORTHO05D001269 6.1e-84 315.8 591 43.3
FvH4_5g07650 Fragaria vesca HOM05D005518 ORTHO05D001269 8.0e-84 315.5 600 42.8
Prupe.5G155700 Prunus persica HOM05D005518 ORTHO05D001269 1.0e-83 315.1 601 43.6
FAN08G0706 Fragaria x ananassa HOM05D005518 ORTHO05D001269 1.4e-83 314.7 594 44.3
FAN04G1413 Fragaria x ananassa HOM05D005518 ORTHO05D001269 1.8e-83 314.3 592 42.6
FAN25G1054 Fragaria x ananassa HOM05D005518 ORTHO05D001269 3.0e-83 313.5 596 42.8
CANSAT80G2082 Cannabis sativa HOM05D005518 ORTHO05D001269 4.0e-83 313.2 598 41.1
Sabra12G0068800 Salix brachista HOM05D005518 ORTHO05D001269 3.4e-82 310.1 584 43.2
Gorai.006G270900 Gossypium raimondii HOM05D005518 ORTHO05D001269 1.7e-81 307.8 597 40.5
Gohir.A09G245800 Gossypium hirsutum HOM05D005518 ORTHO05D001269 1.1e-80 305.1 590 39.8
Nn1g07622 Nelumbo nucifera HOM05D005518 ORTHO05D001269 1.8e-80 304.3 618 40.8
CiPaw.11G011000 Carya illinoinensis HOM05D005518 ORTHO05D001269 2.4e-80 303.9 595 41.3
RcHm_v2.0_Chr1g0380401 Rosa chinensis HOM05D005518 ORTHO05D001269 3.1e-80 303.5 588 41.8
Gohir.D09G246400 Gossypium hirsutum HOM05D005518 ORTHO05D001269 4.1e-80 303.1 595 40.5
Dinv11102 Davidia involucrata HOM05D005518 ORTHO05D001269 1.2e-79 301.6 596 42.6
Actinidia36793 Actinidia chinensis HOM05D005518 ORTHO05D001269 1.6e-79 301.2 590 38.5
Atru.chr9.1022 Acer truncatum HOM05D005518 ORTHO05D001269 2.7e-79 300.4 595 44.4
Glyma.06G172500 Glycine max HOM05D005518 ORTHO05D001269 3.8e-78 296.6 579 41.6
Potri.012G094200 Populus trichocarpa HOM05D005518 ORTHO05D001269 3.8e-78 296.6 597 41.0
Lj1g0006481 Lotus japonicus HOM05D005518 ORTHO05D001269 5.6e-77 292.7 582 41.4
Psat5g139920 Pisum sativum HOM05D005518 ORTHO05D001269 9.5e-77 292.0 551 41.4
CSS0041106 Camellia sinensis var. sinensis HOM05D005518 ORTHO05D001269 1.2e-76 291.6 597 40.2
Lalb_Chr08g0237001 Lupinus albus HOM05D005518 ORTHO05D001269 8.0e-76 288.9 579 40.2
Ciclev10019441m.g Citrus clementina HOM05D005518 ORTHO05D001269 1.4e-75 288.1 605 41.3
TPR.G26139 Trifolium pratense HOM05D005518 ORTHO05D001269 1.4e-75 288.1 582 42.1
COL.COLO4_16831 Corchorus olitorius HOM05D005518 ORTHO05D001269 3.0e-75 287.0 572 41.4
Manes.06G116500 Manihot esculenta HOM05D005518 ORTHO05D001269 3.4e-74 283.5 592 40.0
arahy.Tifrunner.gnm1.ann1.QFFJ7D Arachis hypogaea HOM05D005518 ORTHO05D001269 4.4e-74 283.1 586 40.1
Gorai.007G042000 Gossypium raimondii HOM05D005518 ORTHO05D001269 9.8e-74 282.0 598 39.6
Sed0015656 Sechium edule HOM05D005518 ORTHO05D001269 1.3e-73 281.6 594 38.7
Lalb_Chr11g0069691 Lupinus albus HOM05D005518 ORTHO05D001269 6.4e-73 279.3 579 39.7
Medtr3g075070 Medicago truncatula HOM05D005518 ORTHO05D001269 6.4e-73 279.3 580 39.7
Sed0017473 Sechium edule HOM05D005518 ORTHO05D001269 4.1e-72 276.6 580 41.2
arahy.Tifrunner.gnm1.ann1.P5I184 Arachis hypogaea HOM05D001134 ORTHO05D001269 1.6e-71 274.6 545 40.6
Manes.14G054500 Manihot esculenta HOM05D005518 ORTHO05D001269 4.6e-71 273.1 556 40.6
ClCG03G003580 Citrullus lanatus HOM05D005518 ORTHO05D001269 1.3e-70 271.6 624 39.1
Potri.015G091500 Populus trichocarpa HOM05D005518 ORTHO05D001269 1.3e-70 271.6 602 40.5
CsaV3_1G009430 Cucumis sativus L. HOM05D005518 ORTHO05D001269 2.3e-70 270.8 594 38.7
Glyma.04G193600 Glycine max HOM05D005518 ORTHO05D001269 3.9e-70 270.0 547 41.0
Gohir.D11G039100 Gossypium hirsutum HOM05D005518 ORTHO05D001269 6.6e-70 269.2 592 39.2
Haze_07258 Corylus avellana HOM05D005518 ORTHO05D001269 4.3e-69 266.5 526 42.0
Phvul.009G168300 Phaseolus vulgaris HOM05D005518 ORTHO05D001269 7.3e-69 265.8 569 39.7
TWI14G0969 Tripterygium wilfordii HOM05D005518 ORTHO05D001269 9.5e-69 265.4 604 40.9
Gohir.A11G035500 Gossypium hirsutum HOM05D005518 ORTHO05D001269 1.2e-68 265.0 597 39.2
Migut.D01234 Erythranthe guttata HOM05D005518 ORTHO05D001269 6.2e-68 262.7 587 37.6
DCAR_007472 Daucus carota HOM05D005518 ORTHO05D001269 4.0e-67 260.0 602 38.4
MELO3C002344.2 Cucumis melo HOM05D005518 ORTHO05D001269 1.5e-66 258.1 602 37.5
VMungo1309G2768 Vigna mungo HOM05D005518 ORTHO05D001269 3.7e-65 253.4 567 39.0
SGA_v2.0_scaffold37G14614 Striga asiatica HOM05D005518 ORTHO05D001269 6.4e-65 252.7 592 38.5
Lj5C99T12 Lonicera japonica HOM05D005518 ORTHO05D001269 2.4e-64 250.8 614 38.6
Peaxi162Scf00089g00324 Petunia axillaris HOM05D005518 ORTHO05D001269 5.4e-64 249.6 589 37.9
Rhsim12G0172400 Rhododendron simsii HOM05D005518 ORTHO05D001269 7.0e-64 249.2 597 39.4
PSO782G5170 Papaver somniferum HOM05D005518 ORTHO05D001269 9.2e-64 248.8 626 36.4
TWI23G0187 Tripterygium wilfordii HOM05D005518 ORTHO05D001269 7.8e-63 245.7 625 36.5
PGSC0003DMG400015252 Solanum tuberosum HOM05D005518 ORTHO05D001269 1.7e-62 244.6 574 40.2
Duzib084G0018 Durio zibethinus HOM05D005518 ORTHO05D001269 3.0e-62 243.8 724 33.7
MBI14_g12740_MAGBIO Magnolia biondii HOM05D005518 ORTHO05D001269 1.5e-61 241.5 636 35.4
Sabra15G0113400 Salix brachista HOM05D005518 ORTHO05D001269 1.5e-61 241.5 603 38.3
vmacro16655 Vaccinium macrocarpon HOM05D005518 ORTHO05D001269 1.5e-61 241.5 590 38.8
MSTRG.22916 Avicennia marina HOM05D005518 ORTHO05D001269 2.1e-60 237.7 597 36.0
Cc04_g10180 Coffea canephora HOM05D005518 ORTHO05D001269 2.8e-60 237.3 625 35.0
AL8G24460 Arabidopsis lyrata HOM05D005518 ORTHO05D001269 4.0e-59 233.4 633 35.7
FAN18G1514 Fragaria x ananassa HOM05D000557 ORTHO05D001269 1.5e-58 231.5 578 38.2
Sopen03g030200 Solanum pennellii HOM05D005518 ORTHO05D001269 1.3e-57 228.4 574 39.0
Nitab4.5_0005327g0060 Nicotiana tabacum HOM05D005518 ORTHO05D001269 2.9e-57 227.3 578 38.1
MSTRG.9316 Avicennia marina HOM05D005518 ORTHO05D001269 3.7e-57 226.9 564 36.2
SalBow1G4741 Salvia bowleyana HOM05D005518 ORTHO05D001269 1.4e-56 224.9 550 36.0
CAN.G352.49 Capsicum annuum HOM05D005518 ORTHO05D001269 9.2e-56 222.2 560 38.2
Solyc03g111030.3 Solanum lycopersicum HOM05D005518 ORTHO05D001269 9.2e-56 222.2 574 38.7
ECA247G0960 Erigeron canadensis HOM05D005518 ORTHO05D001269 3.5e-55 220.3 660 34.5
AT5G50350 Arabidopsis thaliana HOM05D005518 ORTHO05D001269 4.6e-55 219.9 623 34.7
CARHR258130 Cardamine hirsuta HOM05D005518 ORTHO05D001269 1.0e-54 218.8 618 34.5
HanXRQChr02g0035181 Helianthus annuus HOM05D005518 ORTHO05D001269 1.7e-54 218.0 600 34.2
Sc22g0004150 Simmondsia chinensis HOM05D005518 ORTHO05D001269 1.7e-54 218.0 370 45.1
PSO063G3591 Papaver somniferum HOM05D005518 ORTHO05D001269 8.6e-54 215.7 581 34.3
THA.LOC104825006 Tarenaya hassleriana HOM05D005518 ORTHO05D001269 4.3e-53 213.4 584 35.6
MD06G1148700 Malus domestica HOM05D005518 ORTHO05D001269 5.6e-53 213.0 569 37.6
THA.LOC104803143 Tarenaya hassleriana HOM05D005518 ORTHO05D001269 1.2e-52 211.8 651 32.1
Carub.0008s1043 Capsella rubella HOM05D005518 ORTHO05D001269 3.6e-52 210.3 659 32.6
Nitab4.5_0001664g0120 Nicotiana tabacum HOM05D005518 ORTHO05D001269 3.6e-52 210.3 573 36.8
Oeu055998.1 Olea europaea HOM05D005518 ORTHO05D001269 2.3e-51 207.6 591 34.9
Aa31LG3G5820 Aethionema arabicum HOM05D005518 ORTHO05D001269 4.0e-51 206.8 652 32.5
CDE06G2288 Ceratophyllum demersum HOM05D005518 ORTHO05D005913 4.0e-51 206.8 576 36.3
Lj9A476T55 Lonicera japonica HOM05D005518 ORTHO05D001269 7.6e-50 202.6 520 36.9
Thhalv10013029m.g Eutrema salsugineum HOM05D005518 ORTHO05D001269 9.9e-50 202.2 637 32.7
Aqoxy4G02270 Aquilegia oxysepala HOM05D005518 ORTHO05D001269 1.3e-49 201.8 612 35.1
Sp6g12480 Schrenkiella parvula HOM05D005518 ORTHO05D001269 4.9e-49 199.9 635 32.9
Oeu023474.2 Olea europaea HOM05D005518 ORTHO05D001269 1.9e-48 198.0 559 34.2
Os06g0609800 Oryza sativa ssp. japonica HOM05D005518 ORTHO05D001269 2.4e-48 197.6 562 34.5
HanXRQChr04g0100301 Helianthus annuus HOM05D005518 ORTHO05D001269 3.2e-48 197.2 697 31.9
Lsat_1_v5_gn_1_29580 Lactuca sativa HOM05D005518 ORTHO05D001269 1.2e-47 195.3 616 32.1
Zm00001eb388520 Zea mays HOM05D005518 ORTHO05D001269 2.1e-47 194.5 627 31.9
A03p27800 Brassica napus HOM05D005518 ORTHO05D001269 4.6e-47 193.4 622 33.0
BraA03t11991Z Brassica rapa HOM05D005518 ORTHO05D001269 1.7e-46 191.4 624 32.7
BcaB01g02898 Brassica carinata HOM05D004180 ORTHO05D001269 2.5e-45 187.6 614 32.7
C03p33530 Brassica napus HOM05D005518 ORTHO05D001269 7.3e-45 186.0 634 31.7
BolC3t15674H Brassica oleracea HOM05D005518 ORTHO05D001269 7.3e-45 186.0 634 31.7
BcaC01g04812 Brassica carinata HOM05D005518 ORTHO05D001269 2.8e-44 184.1 631 31.5
Oeu006376.1 Olea europaea HOM05D005518 ORTHO05D001269 3.6e-44 183.7 350 39.4
ATR0751G048 Amborella trichopoda HOM05D005518 ORTHO05D001269 3.1e-43 180.6 659 30.7
CSS0040133 Camellia sinensis var. sinensis HOM05D005518 ORTHO05D001269 1.2e-42 178.7 281 42.3
CDE03G0480 Ceratophyllum demersum HOM05D005518 ORTHO05D001269 2.0e-42 177.9 574 34.0
vmacro16713 Vaccinium macrocarpon HOM05D005518 ORTHO05D001269 8.4e-41 172.6 260 44.6
Migut.I00490 Erythranthe guttata HOM05D005518 ORTHO05D001269 2.1e-39 167.9 488 36.3
MD14G1162500 Malus domestica HOM05D005518 ORTHO05D001269 6.4e-33 146.4 338 41.7
Ca_25438_v3 Cicer arietinum L. HOM05D005518 ORTHO05D001269 6.2e-28 129.8 201 44.3
Actinidia25603 Actinidia chinensis HOM05D005518 ORTHO05D001269 1.8e-27 128.3 487 32.9
Duzib068G1391 Durio zibethinus HOM05D005518 ORTHO05D001269 6.9e-27 126.3 247 44.5
MD14G1162600 Malus domestica HOM05D005518 ORTHO05D001269 1.7e-25 121.7 203 44.3
Sc22g0004140 Simmondsia chinensis HOM05D005518 ORTHO05D001269 3.0e-22 110.9 162 58.6
CSS0031701 Camellia sinensis var. sinensis HOM05D005518 ORTHO05D001269 1.9e-21 108.2 334 35.6
Ca_16087_v3 Cicer arietinum L. HOM05D005518 ORTHO05D001269 4.6e-15 87.0 161 45.3
unitig_22.g5764 Utricularia gibba HOM05D005518 ORTHO05D001269 5.1e-14 83.6 556 27.2
SEGI_11479 Sequoiadendron giganteum HOM05D005518 ORTHO05D001269 1.5e-13 82.0 213 32.4
HPP92_027039 Vanilla planifolia HOM05D005518 ORTHO05D001269 5.7e-13 80.1 333 31.5
arahy.Tifrunner.gnm1.ann1.QJ9WGP Arachis hypogaea HOM05D001134 ORTHO05D001035 8.2e-12 76.3 114 46.5
Manes.10G063001 Manihot esculenta HOM05D000188 ORTHO05D000362 1.4e-11 75.5 290 25.2
Actinidia08857 Actinidia chinensis HOM05D005518 ORTHO05D001269 4.1e-11 73.9 216 35.6
vmacro16712 Vaccinium macrocarpon HOM05D005518 ORTHO05D001269 3.4e-10 70.9 200 38.0
SEGI_40207 Sequoiadendron giganteum HOM05D005518 ORTHO05D001269 2.2e-09 68.2 626 25.9
Cfa018874 Carpinus fangiana HOM05D005518 ORTHO05D001269 7.9e-07 59.7 63 55.6
AagrBONN_evm.TU.Sc2ySwM_117.3581 Anthoceros agrestis HOM05D024742 ORTHO05D008955 1.0e-06 59.3 466 26.6
EL10Ac5g11534 Beta vulgaris HOM05D005518 ORTHO05D001269 1.3e-06 58.9 68 48.5
CAN.G134.51 Capsicum annuum HOM05D007286 ORTHO05D008955 5.1e-06 57.0 272 27.9
Gohir.A05G285500 Gossypium hirsutum HOM05D007286 ORTHO05D008955 5.1e-06 57.0 439 24.8
Prupe.2G060300 Prunus persica HOM05D007286 ORTHO05D008955 6.7e-06 56.6 290 23.4
CANSAT56G1680 Cannabis sativa HOM05D007286 ORTHO05D008955 8.7e-06 56.2 516 22.7


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