Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sc04g0000700 Simmondsia chinensis HOM05D004927 ORTHO05D005798 6.2e-83 310.8 168 100.0
Dinv23136 Davidia involucrata HOM05D004927 ORTHO05D005798 2.0e-44 183.0 164 64.0
Dinv11165 Davidia involucrata HOM05D004927 ORTHO05D005798 3.3e-44 182.2 164 64.6
vmacro19200 Vaccinium macrocarpon HOM05D004927 ORTHO05D005798 3.3e-44 182.2 162 64.8
GSVIVG01008533001 Vitis vinifera HOM05D004927 ORTHO05D005798 1.4e-42 176.8 164 59.8
CSS0046411 Camellia sinensis var. sinensis HOM05D004927 ORTHO05D005798 2.0e-41 172.9 164 63.4
Actinidia25582 Actinidia chinensis HOM05D004927 ORTHO05D005798 5.0e-40 168.3 162 61.7
EL10As4g23391 Beta vulgaris HOM05D004927 ORTHO05D005798 5.0e-40 168.3 145 65.5
Actinidia08867 Actinidia chinensis HOM05D004927 ORTHO05D005798 1.5e-39 166.8 164 61.0
Potri.015G094600 Populus trichocarpa HOM05D004927 ORTHO05D005798 1.9e-39 166.4 167 62.3
TWI23G0043 Tripterygium wilfordii HOM05D004927 ORTHO05D005798 1.9e-39 166.4 164 62.2
Cc04_g10030 Coffea canephora HOM05D004927 ORTHO05D005798 9.4e-39 164.1 169 60.4
Sp2g26540 Schrenkiella parvula HOM05D004927 ORTHO05D005798 2.7e-38 162.5 160 61.9
Manes.14G051700 Manihot esculenta HOM05D004927 ORTHO05D005798 3.6e-38 162.2 164 61.6
CiPaw.11G008400 Carya illinoinensis HOM05D004927 ORTHO05D005798 1.8e-37 159.8 166 57.2
AT5G63460 Arabidopsis thaliana HOM05D004927 ORTHO05D005798 2.3e-37 159.5 163 58.3
PGR083G0131 Punica granatum HOM05D004927 ORTHO05D005798 2.3e-37 159.5 166 59.0
ECA247G2750 Erigeron canadensis HOM05D004927 ORTHO05D005798 3.0e-37 159.1 152 63.8
AL8G40520 Arabidopsis lyrata HOM05D004927 ORTHO05D005798 4.0e-37 158.7 163 58.9
Actinidia33102 Actinidia chinensis HOM05D004927 ORTHO05D005798 5.2e-37 158.3 162 59.9
Glyma.17G129300 Glycine max HOM05D004927 ORTHO05D005798 8.8e-37 157.5 150 62.7
Lsat_1_v5_gn_4_80380 Lactuca sativa HOM05D004927 ORTHO05D005798 1.1e-36 157.1 162 60.5
CiPaw.12G042500 Carya illinoinensis HOM05D004927 ORTHO05D005798 1.5e-36 156.8 166 59.6
Glyma.05G047500 Glycine max HOM05D004927 ORTHO05D005798 1.5e-36 156.8 145 63.4
Potri.012G096900 Populus trichocarpa HOM05D004927 ORTHO05D005798 4.4e-36 155.2 166 59.0
Rhsim08G0189300 Rhododendron simsii HOM05D004927 ORTHO05D005798 4.4e-36 155.2 183 54.1
Duzib068G0304 Durio zibethinus HOM05D004927 ORTHO05D005798 7.5e-36 154.5 162 59.9
Sabra12G0070900 Salix brachista HOM05D004927 ORTHO05D005798 9.7e-36 154.1 189 54.0
A09p08260 Brassica napus HOM05D004927 ORTHO05D005798 1.7e-35 153.3 158 57.0
C09p09350 Brassica napus HOM05D000789 ORTHO05D005798 2.2e-35 152.9 160 56.2
BolC9t53847H Brassica oleracea HOM05D000789 ORTHO05D005798 2.2e-35 152.9 160 56.2
Lsat_1_v5_gn_1_29040 Lactuca sativa HOM05D004927 ORTHO05D005798 2.2e-35 152.9 156 62.2
Ciclev10022591m.g Citrus clementina HOM05D004927 ORTHO05D005798 2.8e-35 152.5 161 59.0
Nn3g16487 Nelumbo nucifera HOM05D004927 ORTHO05D005798 3.7e-35 152.1 165 57.0
BcaC04g23330 Brassica carinata HOM05D004927 ORTHO05D005798 4.8e-35 151.8 160 55.6
Carub.0008s2416 Capsella rubella HOM05D004927 ORTHO05D005798 6.3e-35 151.4 163 58.3
Prupe.5G152100 Prunus persica HOM05D004927 ORTHO05D005798 6.3e-35 151.4 164 57.3
BcaB04g19918 Brassica carinata HOM05D004927 ORTHO05D005798 1.1e-34 150.6 158 56.3
CANSAT80G0771 Cannabis sativa HOM05D004927 ORTHO05D005798 1.1e-34 150.6 164 56.1
Thhalv10005047m.g Eutrema salsugineum HOM05D004927 ORTHO05D005798 1.1e-34 150.6 163 57.1
Solyc03g111270.2 Solanum lycopersicum HOM05D004927 ORTHO05D005798 1.4e-34 150.2 168 56.0
Sopen03g030400 Solanum pennellii HOM05D004927 ORTHO05D005798 1.4e-34 150.2 168 56.0
THA.LOC104798947 Tarenaya hassleriana HOM05D004927 ORTHO05D005798 1.4e-34 150.2 163 54.6
CARHR277310 Cardamine hirsuta HOM05D004927 ORTHO05D005798 1.8e-34 149.8 163 55.8
HanXRQChr07g0193231 Helianthus annuus HOM05D004927 ORTHO05D005798 2.4e-34 149.4 148 62.8
Lj4g0014142 Lotus japonicus HOM05D004927 ORTHO05D005798 3.1e-34 149.1 146 59.6
Manes.06G118800 Manihot esculenta HOM05D004927 ORTHO05D005798 3.1e-34 149.1 167 57.5
Sabra15G0116000 Salix brachista HOM05D004927 ORTHO05D005798 5.3e-34 148.3 195 51.8
HanXRQChr09g0273101 Helianthus annuus HOM05D004927 ORTHO05D005798 7.0e-34 147.9 164 60.4
Aa31LG1G18580 Aethionema arabicum HOM05D004927 ORTHO05D005798 9.1e-34 147.5 163 56.4
Thecc.03G128000 Theobroma cacao HOM05D004927 ORTHO05D005798 1.2e-33 147.1 162 55.6
Gohir.D11G039650 Gossypium hirsutum HOM05D004927 ORTHO05D005798 2.0e-33 146.4 162 56.2
Atru.chr9.1061 Acer truncatum HOM05D004927 ORTHO05D005798 2.7e-33 146.0 153 56.2
Duzib205G1407 Durio zibethinus HOM05D004927 ORTHO05D005798 2.7e-33 146.0 164 56.7
THA.LOC104818187 Tarenaya hassleriana HOM05D004927 ORTHO05D005798 3.5e-33 145.6 163 54.6
TWI39G0602 Tripterygium wilfordii HOM05D004927 ORTHO05D005798 4.5e-33 145.2 162 58.0
Gorai.007G042600 Gossypium raimondii HOM05D004927 ORTHO05D005798 7.7e-33 144.4 158 57.0
MBI07_g34620_MAGBIO Magnolia biondii HOM05D004927 ORTHO05D005798 1.0e-32 144.1 157 59.2
MD06G1142800 Malus domestica HOM05D004927 ORTHO05D005798 1.3e-32 143.7 166 53.0
Nitab4.5_0003005g0020 Nicotiana tabacum HOM05D004927 ORTHO05D005798 1.3e-32 143.7 168 54.2
Phvul.003G210400 Phaseolus vulgaris HOM05D004927 ORTHO05D005798 2.2e-32 142.9 145 58.6
BraA09t36477Z Brassica rapa HOM05D004927 ORTHO05D005798 2.9e-32 142.5 171 52.0
Oeu056013.1 Olea europaea HOM05D004927 ORTHO05D005798 3.8e-32 142.1 147 55.8
Gohir.A11G036100 Gossypium hirsutum HOM05D004927 ORTHO05D005798 5.0e-32 141.7 162 56.2
MSTRG.11279 Avicennia marina HOM05D004927 ORTHO05D005798 8.5e-32 141.0 166 55.4
MSTRG.4598 Avicennia marina HOM05D004927 ORTHO05D005798 3.2e-31 139.0 165 50.9
Dinv04882 Davidia involucrata HOM05D004927 ORTHO05D005798 3.2e-31 139.0 122 63.1
SGA_v2.0_scaffold215G42324 Striga asiatica HOM05D004927 ORTHO05D005798 4.2e-31 138.7 159 52.8
Haze_07225 Corylus avellana HOM05D004927 ORTHO05D005798 5.5e-31 138.3 126 64.3
SalBow1G5982 Salvia bowleyana HOM05D004927 ORTHO05D005798 1.6e-30 136.7 164 51.8
arahy.Tifrunner.gnm1.ann1.9DG48R Arachis hypogaea HOM05D004927 ORTHO05D005798 2.1e-30 136.3 135 63.0
arahy.Tifrunner.gnm1.ann1.PKYK26 Arachis hypogaea HOM05D004927 ORTHO05D005798 2.1e-30 136.3 135 63.0
Lalb_Chr13g0297281 Lupinus albus HOM05D004927 ORTHO05D005798 2.1e-30 136.3 137 59.1
VMungo1215G0874 Vigna mungo HOM05D004927 ORTHO05D005798 2.7e-30 136.0 133 62.4
Lalb_Chr12g0202181 Lupinus albus HOM05D004927 ORTHO05D005798 6.1e-30 134.8 138 59.4
PSO063G5502 Papaver somniferum HOM05D004927 ORTHO05D005798 6.1e-30 134.8 158 51.9
MELO3C026211.2 Cucumis melo HOM05D004927 ORTHO05D005798 1.0e-29 134.0 143 60.8
Gorai.006G271700 Gossypium raimondii HOM05D004927 ORTHO05D005798 1.8e-29 133.3 162 53.1
CsaV3_1G000620 Cucumis sativus L. HOM05D004927 ORTHO05D005798 4.0e-29 132.1 143 60.1
DCAR_026226 Daucus carota HOM05D004927 ORTHO05D005798 6.8e-29 131.3 166 52.4
HPP92_001413 Vanilla planifolia HOM05D004927 ORTHO05D005798 6.8e-29 131.3 172 48.8
CDE02G1054 Ceratophyllum demersum HOM05D004927 ORTHO05D005798 2.6e-28 129.4 147 52.4
PSO782G2667 Papaver somniferum HOM05D004927 ORTHO05D005798 2.6e-28 129.4 154 51.9
Gohir.A09G247250 Gossypium hirsutum HOM05D004927 ORTHO05D005798 4.4e-28 128.6 158 54.4
SalBow1G7483 Salvia bowleyana HOM05D004927 ORTHO05D005798 4.4e-28 128.6 194 45.9
Sed0011812 Sechium edule HOM05D004927 ORTHO05D005798 4.4e-28 128.6 146 56.2
MD14G1158000 Malus domestica HOM05D004927 ORTHO05D005798 5.7e-28 128.3 166 49.4
Aqoxy3G01521 Aquilegia oxysepala HOM05D004927 ORTHO05D005798 9.8e-28 127.5 148 54.1
Oeu018539.1 Olea europaea HOM05D004927 ORTHO05D005798 2.2e-27 126.3 158 51.3
unitig_61.g26197 Utricularia gibba HOM05D004927 ORTHO05D005798 2.8e-27 125.9 162 50.6
Migut.D01264 Erythranthe guttata HOM05D004927 ORTHO05D005798 1.1e-26 124.0 166 48.2
TPR.G19215 Trifolium pratense HOM05D004927 ORTHO05D005798 7.0e-26 121.3 137 52.6
TAR622G0157 Trochodendron aralioides HOM05D004927 ORTHO05D005798 9.1e-26 120.9 144 51.4
FvH4_5g08180 Fragaria vesca HOM05D004927 ORTHO05D005798 1.6e-25 120.2 163 49.7
Psat0s2546g0040 Pisum sativum HOM05D004927 ORTHO05D005798 2.0e-25 119.8 146 51.4
Gorai.004G275800 Gossypium raimondii HOM05D004927 ORTHO05D005798 2.7e-25 119.4 162 50.0
FAN18G3853 Fragaria x ananassa HOM05D004927 ORTHO05D005798 3.5e-25 119.0 159 50.9
FAN13G0393 Fragaria x ananassa HOM05D004927 ORTHO05D005798 5.9e-25 118.2 159 50.9
Gohir.D08G258600 Gossypium hirsutum HOM05D004927 ORTHO05D005798 7.7e-25 117.9 158 52.5
FAN04G0012 Fragaria x ananassa HOM05D004927 ORTHO05D005798 2.2e-24 116.3 159 50.9
FAN08G3438 Fragaria x ananassa HOM05D004927 ORTHO05D005798 2.9e-24 115.9 159 50.3
Medtr4g103580 Medicago truncatula HOM05D004927 ORTHO05D005798 2.9e-24 115.9 140 51.4
PSO017G7268 Papaver somniferum HOM05D004927 ORTHO05D005798 5.0e-24 115.2 182 47.3
PSO478G0696 Papaver somniferum HOM05D004927 ORTHO05D005798 8.5e-24 114.4 161 49.1
Nitab4.5_0016919g0010 Nicotiana tabacum HOM05D004927 ORTHO05D005798 1.1e-23 114.0 134 52.2
Os11g0483600 Oryza sativa ssp. japonica HOM05D004927 ORTHO05D005798 1.1e-23 114.0 155 46.5
RcHm_v2.0_Chr7g0190331 Rosa chinensis HOM05D004927 ORTHO05D005798 1.9e-23 113.2 168 47.6
AagrBONN_evm.TU.Sc2ySwM_344.432 Anthoceros agrestis HOM05D004927 ORTHO05D005798 2.5e-23 112.8 152 44.7
SGA_v2.0_scaffold161G37795 Striga asiatica HOM05D004927 ORTHO05D005798 3.6e-22 109.0 206 39.3
Os12g0442900 Oryza sativa ssp. japonica HOM05D004927 ORTHO05D005798 6.1e-22 108.2 160 46.9
ATR0561G036 Amborella trichopoda HOM05D004927 ORTHO05D005798 8.0e-22 107.8 111 57.7
CDE05G1557 Ceratophyllum demersum HOM05D004927 ORTHO05D005798 1.0e-21 107.5 123 52.8
Zm00001eb169640 Zea mays HOM05D004927 ORTHO05D005798 3.0e-21 105.9 146 46.6
PGSC0003DMG400015243 Solanum tuberosum HOM05D004927 ORTHO05D005798 8.8e-21 104.4 184 44.6
QL10p003733 Quercus lobata HOM05D004927 ORTHO05D005798 2.0e-20 103.2 125 49.6
BolC2t12346H Brassica oleracea HOM05D001512 ORTHO05D001574 9.8e-20 100.9 112 51.8
ClCG06G017840 Citrullus lanatus HOM05D004927 ORTHO05D005798 3.7e-19 99.0 93 62.4
C02p62750 Brassica napus HOM05D001512 ORTHO05D001574 4.9e-19 98.6 112 50.9
CBR_g27958 Chara braunii HOM05D004927 ORTHO05D005798 6.3e-19 98.2 155 43.2
vmacro16676 Vaccinium macrocarpon HOM05D004927 ORTHO05D005798 6.3e-19 98.2 110 56.4
HPP92_001420 Vanilla planifolia HOM05D004927 ORTHO05D005798 2.4e-18 96.3 104 51.9
Lj9A478G96 Lonicera japonica HOM05D004927 ORTHO05D005798 5.4e-18 95.1 139 45.3
Pp3c8_10310 Physcomitrium patens HOM05D004927 ORTHO05D005798 2.0e-17 93.2 149 39.6
Gohir.A09G246700 Gossypium hirsutum HOM05D004927 ORTHO05D005798 5.9e-17 91.7 96 56.2
CBR_g36334 Chara braunii HOM05D004927 ORTHO05D005798 1.3e-16 90.5 163 42.9
Migut.I00501 Erythranthe guttata HOM05D004927 ORTHO05D005798 2.3e-16 89.7 100 53.0
Lsat_1_v5_gn_5_95420 Lactuca sativa HOM05D004927 ORTHO05D005798 2.9e-16 89.4 93 58.1
Mapoly0121s0035 Marchantia polymorpha HOM05D004927 ORTHO05D005798 3.8e-16 89.0 109 48.6
Eucgr.B00112 Eucalyptus grandis HOM05D004927 ORTHO05D005798 6.6e-16 88.2 109 53.2
CAN.G352.25 Capsicum annuum HOM05D004927 ORTHO05D005798 1.5e-15 87.0 84 54.8
AUR62029623 Chenopodium quinoa HOM05D004927 ORTHO05D005798 5.6e-15 85.1 286 31.1
BcaC03g18207 Brassica carinata HOM05D004927 ORTHO05D005798 2.1e-14 83.2 124 43.5
SMO334G0034 Selaginella moellendorffii HOM05D004927 ORTHO05D005798 1.5e-12 77.0 146 37.7
Hma1.2p1_2767F.1_g328170 Hydrangea macrophylla HOM05D004927 ORTHO05D005798 4.4e-12 75.5 82 58.5
Gohir.D01G081600 Gossypium hirsutum HOM05D004927 ORTHO05D005798 7.0e-10 68.2 56 64.3
Gorai.007G057300 Gossypium raimondii HOM05D004927 ORTHO05D005798 7.0e-10 68.2 56 64.3
Gohir.D07G062100 Gossypium hirsutum HOM05D004927 ORTHO05D005798 1.2e-09 67.4 51 64.7
Gohir.D09G248000 Gossypium hirsutum HOM05D004927 ORTHO05D005798 2.0e-09 66.6 115 41.7
COL.COLO4_28098 Corchorus olitorius HOM05D004927 ORTHO05D005798 5.9e-09 65.1 79 54.4
SEGI_27141 Sequoiadendron giganteum HOM05D004927 ORTHO05D005798 5.9e-09 65.1 49 65.3
Cfa018832 Carpinus fangiana HOM05D004927 ORTHO05D005798 1.3e-08 63.9 90 50.0
Oeu037712.1 Olea europaea HOM05D004927 ORTHO05D005798 1.3e-08 63.9 60 58.3
Gohir.D11G291800 Gossypium hirsutum HOM05D004927 ORTHO05D005798 1.7e-08 63.5 54 63.0
BraA02t09201Z Brassica rapa HOM05D004927 ORTHO05D005798 6.6e-08 61.6 94 43.6
Cpa.g.sc13.128 Carica papaya HOM05D004927 ORTHO05D005798 1.5e-07 60.5 63 61.9
PRCOL_00006426 Prasinoderma coloniale HOM05D004927 ORTHO05D005798 3.6e-06 55.8 59 45.8


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