Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sc04g0000210 Simmondsia chinensis HOM05D006891 ORTHO05D008671 5.7e-181 637.5 331 100.0
Nitab4.5_0000976g0010 Nicotiana tabacum HOM05D006891 ORTHO05D008671 4.2e-131 471.9 331 76.4
PGSC0003DMG400014243 Solanum tuberosum HOM05D006891 ORTHO05D008671 1.0e-129 467.2 331 75.5
Solyc03g118240.4 Solanum lycopersicum HOM05D006891 ORTHO05D008671 2.3e-129 466.1 331 75.2
CSS0004907 Camellia sinensis var. sinensis HOM05D006891 ORTHO05D008671 6.6e-129 464.5 331 75.2
Dinv13725 Davidia involucrata HOM05D006891 ORTHO05D008671 6.6e-129 464.5 332 75.0
Sopen03g037150 Solanum pennellii HOM05D006891 ORTHO05D008671 6.6e-129 464.5 331 74.6
Ciclev10032123m.g Citrus clementina HOM05D006891 ORTHO05D008671 1.1e-128 463.8 308 76.9
COL.COLO4_37249 Corchorus olitorius HOM05D006891 ORTHO05D008671 1.9e-128 463.0 308 78.6
Nn3g16285 Nelumbo nucifera HOM05D006891 ORTHO05D008671 5.6e-128 461.5 330 73.3
Lj9C486T5 Lonicera japonica HOM05D006891 ORTHO05D008671 2.8e-127 459.1 331 74.0
TAR475G0005 Trochodendron aralioides HOM05D006891 ORTHO05D008671 1.1e-126 457.2 335 71.6
Gorai.001G054400 Gossypium raimondii HOM05D006891 ORTHO05D008671 1.4e-126 456.8 332 73.5
Actinidia18305 Actinidia chinensis HOM05D006891 ORTHO05D008671 2.4e-126 456.1 331 74.0
VMungo0251G3529 Vigna mungo HOM05D006891 ORTHO05D008671 2.4e-126 456.1 332 73.2
Glyma.08G007900 Glycine max HOM05D006891 ORTHO05D008671 4.0e-126 455.3 332 72.3
QL10p000565 Quercus lobata HOM05D006891 ORTHO05D008671 5.3e-126 454.9 333 73.3
Gohir.D07G051300 Gossypium hirsutum HOM05D006891 ORTHO05D008671 9.0e-126 454.1 332 72.9
Gohir.A07G047000 Gossypium hirsutum HOM05D006891 ORTHO05D008671 1.5e-125 453.4 332 72.9
Phvul.002G281900 Phaseolus vulgaris HOM05D006891 ORTHO05D008671 1.5e-125 453.4 332 72.9
TWI39G1149 Tripterygium wilfordii HOM05D006891 ORTHO05D008671 1.5e-125 453.4 338 73.1
CAN.G843.14 Capsicum annuum HOM05D006891 ORTHO05D008671 2.6e-125 452.6 290 81.0
Duzib205G0665 Durio zibethinus HOM05D006891 ORTHO05D008671 2.6e-125 452.6 332 73.5
Glyma.05G200500 Glycine max HOM05D006891 ORTHO05D008671 4.4e-125 451.8 312 76.3
Cfa018711 Carpinus fangiana HOM05D006891 ORTHO05D008671 7.6e-125 451.1 331 72.8
Peaxi162Scf00314g00625 Petunia axillaris HOM05D006891 ORTHO05D008671 7.6e-125 451.1 329 72.9
Haze_07102 Corylus avellana HOM05D006891 ORTHO05D008671 2.2e-124 449.5 331 72.8
Eucgr.G02043 Eucalyptus grandis HOM05D006891 ORTHO05D008671 3.8e-124 448.7 332 71.4
Lalb_Chr13g0296991 Lupinus albus HOM05D006891 ORTHO05D008671 3.8e-124 448.7 321 74.5
Lj4g0024376 Lotus japonicus HOM05D006891 ORTHO05D008671 4.9e-124 448.4 330 72.4
PGR142G3013 Punica granatum HOM05D006891 ORTHO05D008671 4.9e-124 448.4 303 76.6
MBI04_g35563_MAGBIO Magnolia biondii HOM05D006891 ORTHO05D008671 1.4e-123 446.8 316 73.4
Thecc.03G139800 Theobroma cacao HOM05D006891 ORTHO05D008671 3.2e-123 445.7 310 75.2
Cpa.g.sc13.164 Carica papaya HOM05D006891 ORTHO05D008671 9.3e-123 444.1 295 77.3
vmacro19179 Vaccinium macrocarpon HOM05D006891 ORTHO05D008671 1.2e-122 443.7 290 79.7
Prupe.5G142500 Prunus persica HOM05D006891 ORTHO05D008671 1.6e-122 443.4 331 71.6
CiPaw.12G001000 Carya illinoinensis HOM05D006891 ORTHO05D008671 2.1e-122 443.0 331 71.3
Atru.chr6.1910 Acer truncatum HOM05D006891 ORTHO05D008671 2.7e-122 442.6 297 76.4
Migut.D01186 Erythranthe guttata HOM05D006891 ORTHO05D008671 7.9e-122 441.0 331 69.8
MSTRG.4642 Avicennia marina HOM05D006891 ORTHO05D008671 3.0e-121 439.1 316 72.8
MD14G1147900 Malus domestica HOM05D006891 ORTHO05D008671 3.0e-121 439.1 331 70.1
MD06G1131500 Malus domestica HOM05D006891 ORTHO05D008671 4.3e-120 435.3 334 70.1
DCAR_025652 Daucus carota HOM05D006891 ORTHO05D008671 5.6e-120 434.9 333 70.0
PSO017G2699 Papaver somniferum HOM05D006891 ORTHO05D008671 9.6e-120 434.1 312 72.4
PSO478G3300 Papaver somniferum HOM05D006891 ORTHO05D008671 2.8e-119 432.6 295 75.6
Aqoxy5G03144 Aquilegia oxysepala HOM05D006891 ORTHO05D008671 3.6e-119 432.2 311 70.7
Sed0026594 Sechium edule HOM05D006891 ORTHO05D008671 4.8e-119 431.8 315 72.4
arahy.Tifrunner.gnm1.ann1.5G0V08 Arachis hypogaea HOM05D006891 ORTHO05D008671 6.2e-119 431.4 292 78.1
Manes.06G126400 Manihot esculenta HOM05D006891 ORTHO05D008671 4.0e-118 428.7 329 68.7
SGA_v2.0_scaffold40G15677 Striga asiatica HOM05D006891 ORTHO05D008671 4.0e-118 428.7 281 77.6
Sabra12G0078900 Salix brachista HOM05D006891 ORTHO05D008671 9.0e-118 427.6 352 66.5
CARHR232470 Cardamine hirsuta HOM05D006891 ORTHO05D008671 1.5e-117 426.8 324 70.4
ClCG06G018350 Citrullus lanatus HOM05D006891 ORTHO05D008671 1.5e-117 426.8 285 77.2
AUR62009532 Chenopodium quinoa HOM05D006891 ORTHO05D008671 2.6e-117 426.0 258 82.9
Lsat_1_v5_gn_4_84561 Lactuca sativa HOM05D006891 ORTHO05D008671 2.6e-117 426.0 283 75.6
RcHm_v2.0_Chr7g0188761 Rosa chinensis HOM05D006891 ORTHO05D008671 3.4e-117 425.6 331 70.1
MELO3C026160.2 Cucumis melo HOM05D006891 ORTHO05D008671 4.5e-117 425.2 280 78.2
FvH4_5g09430 Fragaria vesca HOM05D006891 ORTHO05D008671 4.5e-117 425.2 331 69.2
Rhsim08G0196800 Rhododendron simsii HOM05D006891 ORTHO05D008671 4.5e-117 425.2 333 69.4
HanXRQChr11g0350211 Helianthus annuus HOM05D006891 ORTHO05D008671 5.8e-117 424.9 276 77.5
Thhalv10025780m.g Eutrema salsugineum HOM05D006891 ORTHO05D008671 7.6e-117 424.5 323 69.0
CsaV3_1G000080 Cucumis sativus L. HOM05D006891 ORTHO05D008671 1.3e-116 423.7 269 79.2
FAN04G1325 Fragaria x ananassa HOM05D006891 ORTHO05D008671 1.7e-116 423.3 331 68.3
HanXRQChr09g0273851 Helianthus annuus HOM05D006891 ORTHO05D008671 1.7e-116 423.3 276 77.2
FAN08G0367 Fragaria x ananassa HOM05D006891 ORTHO05D008671 4.9e-116 421.8 302 72.2
Aa31LG7G10590 Aethionema arabicum HOM05D006891 ORTHO05D008671 8.4e-116 421.0 324 69.8
BraA03t14640Z Brassica rapa HOM05D006891 ORTHO05D008671 8.4e-116 421.0 323 69.0
CDE11G0769 Ceratophyllum demersum HOM05D006891 ORTHO05D008671 8.4e-116 421.0 331 68.3
A01p16330 Brassica napus HOM05D006891 ORTHO05D008671 1.1e-115 420.6 289 75.1
Carub.0007s1596 Capsella rubella HOM05D006891 ORTHO05D008671 1.1e-115 420.6 326 69.3
Sp7g23060 Schrenkiella parvula HOM05D006891 ORTHO05D008671 1.1e-115 420.6 323 68.4
AT4G25080 Arabidopsis thaliana HOM05D006891 ORTHO05D008671 1.4e-115 420.2 326 69.3
BcaC09g50812 Brassica carinata HOM05D006891 ORTHO05D008671 2.4e-115 419.5 323 68.7
BcaNung03997 Brassica carinata HOM05D006891 ORTHO05D008671 2.4e-115 419.5 324 68.8
C07p53960 Brassica napus HOM05D006891 ORTHO05D008671 2.4e-115 419.5 323 68.4
AL7G28070 Arabidopsis lyrata HOM05D006891 ORTHO05D008671 5.5e-115 418.3 326 68.7
BraA01t01588Z Brassica rapa HOM05D006891 ORTHO05D008671 5.5e-115 418.3 323 68.7
C01p20480 Brassica napus HOM05D006891 ORTHO05D008671 7.1e-115 417.9 323 68.4
BolC1t01979H Brassica oleracea HOM05D006891 ORTHO05D008671 7.1e-115 417.9 323 68.4
Medtr8g100120 Medicago truncatula HOM05D006891 ORTHO05D008671 7.1e-115 417.9 321 70.1
A03p55730 Brassica napus HOM05D006891 ORTHO05D008671 9.3e-115 417.5 323 68.4
FAN18G0906 Fragaria x ananassa HOM05D006891 ORTHO05D008671 1.2e-114 417.2 331 68.0
BolC7t45886H Brassica oleracea HOM05D006891 ORTHO05D008671 3.7e-111 405.6 323 66.9
Psat7g039320 Pisum sativum HOM05D006891 ORTHO05D008671 1.4e-110 403.7 333 67.0
GSVIVG01008643001 Vitis vinifera HOM05D006891 ORTHO05D008671 1.4e-110 403.7 308 71.1
arahy.Tifrunner.gnm1.ann1.0QZ944 Arachis hypogaea HOM05D006891 ORTHO05D008671 3.1e-110 402.5 292 75.0
ECA232G2217 Erigeron canadensis HOM05D006891 ORTHO05D008671 6.9e-110 401.4 270 74.8
HPP92_020658 Vanilla planifolia HOM05D006891 ORTHO05D008671 1.3e-108 397.1 333 65.5
Hund02505 Selenicereus undatus HOM05D006891 ORTHO05D008671 1.4e-107 393.7 231 86.1
TPR.G12963 Trifolium pratense HOM05D006891 ORTHO05D008671 3.2e-107 392.5 291 72.5
AUR62041695 Chenopodium quinoa HOM05D006891 ORTHO05D008671 7.1e-107 391.3 336 65.2
CANSAT56G0245 Cannabis sativa HOM05D006891 ORTHO05D008671 3.5e-106 389.0 237 81.4
CANSAT56G1732 Cannabis sativa HOM05D006891 ORTHO05D008671 3.5e-106 389.0 237 81.4
unitig_736.g22830 Utricularia gibba HOM05D002810 ORTHO05D003983 8.7e-105 384.4 287 70.4
SalBow1G6359 Salvia bowleyana HOM05D006891 ORTHO05D008671 3.3e-104 382.5 329 63.8
ATR0579G076 Amborella trichopoda HOM05D006891 ORTHO05D008671 4.8e-103 378.6 241 78.4
Potri.012G106600 Populus trichocarpa HOM05D006891 ORTHO05D008671 4.8e-103 378.6 229 81.7
THA.LOC104811559 Tarenaya hassleriana HOM05D006891 ORTHO05D008671 1.3e-100 370.5 310 65.2
SEGI_33809 Sequoiadendron giganteum HOM05D006891 ORTHO05D008671 3.2e-99 365.9 308 62.7
Ah.11g046860 Amaranthus hybridus HOM05D006891 ORTHO05D008671 3.1e-94 349.4 209 84.2
AagrBONN_evm.TU.Sc2ySwM_368.2875 Anthoceros agrestis HOM05D006891 ORTHO05D008671 6.9e-94 348.2 266 65.4
SMO115G0098 Selaginella moellendorffii HOM05D006891 ORTHO05D008671 6.9e-94 348.2 269 66.5
Pp3c12_24890 Physcomitrium patens HOM05D006891 ORTHO05D008671 7.7e-93 344.7 299 60.5
EL10Ac5g11293 Beta vulgaris HOM05D006891 ORTHO05D008671 6.7e-89 331.6 273 65.2
Mapoly0112s0034 Marchantia polymorpha HOM05D006891 ORTHO05D008671 2.8e-87 326.2 263 62.4
Cre12.g498550 Chlamydomonas reinhardtii HOM05D006891 ORTHO05D008671 9.1e-86 321.2 266 59.0
Zm00001eb269720 Zea mays HOM05D006891 ORTHO05D008671 2.9e-84 316.2 305 57.7
MCO11G158 Micromonas commoda HOM05D006891 ORTHO05D008671 6.7e-73 278.5 278 52.9
Ca_16812_v3 Cicer arietinum L. HOM05D006891 ORTHO05D008671 5.9e-69 265.4 235 64.3
unitig_899.g14822 Utricularia gibba HOM05D002810 ORTHO05D003983 5.7e-64 248.8 272 52.6
AUR62044303 Chenopodium quinoa HOM05D006891 ORTHO05D008671 2.8e-63 246.5 240 57.9
Hma1.2p1_0577F.1_g182340 Hydrangea macrophylla HOM05D006891 ORTHO05D008671 1.7e-60 237.3 224 58.9
Potri.015G105702 Populus trichocarpa HOM05D006891 ORTHO05D008671 1.8e-57 227.3 234 54.3
Dinv23219 Davidia involucrata HOM05D006891 ORTHO05D008671 5.6e-51 205.7 150 71.3
Os06g0132400 Oryza sativa ssp. japonica HOM05D006891 ORTHO05D008671 2.4e-38 163.7 103 71.8
SGA_v2.0_scaffold377G50317 Striga asiatica HOM05D006891 ORTHO05D008671 1.7e-20 104.4 68 73.5
CBR_g32078 Chara braunii HOM05D006891 ORTHO05D008671 9.6e-19 98.6 93 54.8
Eucgr.G02044 Eucalyptus grandis HOM05D006891 ORTHO05D008671 3.1e-09 67.0 41 73.2
BraA03t14643Z Brassica rapa HOM05D006891 ORTHO05D033303 5.8e-08 62.8 64 59.4
Lsat_1_v5_gn_6_13761 Lactuca sativa HOM05D000295 ORTHO05D000188 3.2e-06 57.0 85 42.4


User provided reference genes

Program Settings