Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sc03g0011530 Simmondsia chinensis HOM05D005351 ORTHO05D006542 0.0e+00 1227.2 690 100.0
Hund23091 Selenicereus undatus HOM05D005351 ORTHO05D006542 8.4e-102 375.6 732 44.0
RcHm_v2.0_Chr5g0075571 Rosa chinensis HOM05D005351 ORTHO05D006542 1.5e-95 354.8 653 43.2
Cfa021891 Carpinus fangiana HOM05D005351 ORTHO05D006542 2.2e-94 350.9 650 44.9
Haze_09867 Corylus avellana HOM05D005351 ORTHO05D006542 3.8e-94 350.1 648 45.4
EL10Ac4g07541 Beta vulgaris HOM05D005351 ORTHO05D006542 8.5e-94 349.0 708 44.4
AUR62017130 Chenopodium quinoa HOM05D005351 ORTHO05D006542 1.9e-93 347.8 718 42.5
AUR62035679 Chenopodium quinoa HOM05D005351 ORTHO05D006542 1.9e-93 347.8 717 43.7
Dinv40885 Davidia involucrata HOM05D005351 ORTHO05D006542 3.6e-92 343.6 710 40.0
FAN11G1247 Fragaria x ananassa HOM05D005351 ORTHO05D006542 4.5e-87 326.6 613 43.9
FAN21G2745 Fragaria x ananassa HOM05D005351 ORTHO05D006542 1.7e-86 324.7 613 43.7
TAR626G0279 Trochodendron aralioides HOM05D005351 ORTHO05D006542 2.9e-86 323.9 712 40.0
CSS0045517 Camellia sinensis var. sinensis HOM05D005351 ORTHO05D006542 5.0e-86 323.2 625 42.7
Prupe.6G028400 Prunus persica HOM05D005351 ORTHO05D006542 1.1e-85 322.0 663 40.9
FAN16G2746 Fragaria x ananassa HOM05D005351 ORTHO05D006542 1.4e-85 321.6 613 43.6
CSS0029070 Camellia sinensis var. sinensis HOM05D005351 ORTHO05D006542 9.4e-85 318.9 625 42.6
FAN25G1298 Fragaria x ananassa HOM05D005351 ORTHO05D006542 9.4e-85 318.9 607 43.3
CiPaw.12G140700 Carya illinoinensis HOM05D005351 ORTHO05D006542 3.6e-84 317.0 745 39.6
MD03G1035400 Malus domestica HOM05D005351 ORTHO05D006542 3.0e-83 313.9 643 40.6
Duzib213G0009 Durio zibethinus HOM05D005351 ORTHO05D006542 5.7e-82 309.7 652 39.3
Nn1g02046 Nelumbo nucifera HOM05D005351 ORTHO05D006542 3.7e-81 307.0 679 40.1
Nn3g19476 Nelumbo nucifera HOM05D005351 ORTHO05D006542 7.0e-80 302.8 678 39.2
MD11G1037100 Malus domestica HOM05D005351 ORTHO05D006542 2.0e-79 301.2 644 40.2
Hma1.2p1_0193F.1_g083920 Hydrangea macrophylla HOM05D005351 ORTHO05D006542 4.5e-79 300.1 738 38.5
QL08p002685 Quercus lobata HOM05D005351 ORTHO05D006542 1.3e-78 298.5 655 41.4
TWI38G1324 Tripterygium wilfordii HOM05D005351 ORTHO05D006542 3.2e-77 293.9 755 38.4
Gorai.009G450800 Gossypium raimondii HOM05D005351 ORTHO05D006542 5.5e-77 293.1 647 38.9
Ah.06g181500 Amaranthus hybridus HOM05D005351 ORTHO05D006542 2.7e-76 290.8 694 40.8
Potri.001G371600 Populus trichocarpa HOM05D005351 ORTHO05D006542 2.7e-76 290.8 671 39.5
TWI38G2212 Tripterygium wilfordii HOM05D005351 ORTHO05D006542 3.6e-76 290.4 673 38.9
Gohir.D05G384000 Gossypium hirsutum HOM05D005351 ORTHO05D006542 4.7e-76 290.0 654 38.4
Actinidia03651 Actinidia chinensis HOM05D005351 ORTHO05D006542 6.1e-76 289.7 620 40.3
Manes.01G003500 Manihot esculenta HOM05D005351 ORTHO05D006542 8.0e-76 289.3 659 41.3
Sabra16G0244200 Salix brachista HOM05D005351 ORTHO05D006542 3.0e-75 287.3 642 40.8
GSVIVG01014743001 Vitis vinifera HOM05D005351 ORTHO05D006542 3.0e-75 287.3 604 36.6
Gohir.A04G005700 Gossypium hirsutum HOM05D005351 ORTHO05D006542 1.1e-74 285.4 653 37.8
Eucgr.F02026 Eucalyptus grandis HOM05D005351 ORTHO05D006542 1.8e-72 278.1 602 41.4
vmacro09623 Vaccinium macrocarpon HOM05D005351 ORTHO05D006542 3.1e-72 277.3 711 36.8
COL.COLO4_07741 Corchorus olitorius HOM05D005351 ORTHO05D006542 4.1e-72 276.9 646 39.8
SGA_v2.0_scaffold168G38576 Striga asiatica HOM05D005351 ORTHO05D006542 1.2e-71 275.4 718 38.6
Ciclev10007493m.g Citrus clementina HOM05D005351 ORTHO05D006542 4.5e-71 273.5 666 37.4
Thecc.07G007900 Theobroma cacao HOM05D005351 ORTHO05D006542 7.7e-71 272.7 669 37.8
PGSC0003DMG400014404 Solanum tuberosum HOM05D005351 ORTHO05D006542 2.2e-70 271.2 723 36.9
Cpa.g.sc12.108 Carica papaya HOM05D005351 ORTHO05D006542 5.0e-70 270.0 670 36.4
Cc05_g15290 Coffea canephora HOM05D005351 ORTHO05D006542 1.5e-69 268.5 633 39.0
SalBow8G3039 Salvia bowleyana HOM05D005351 ORTHO05D006542 5.5e-69 266.5 627 41.8
Phvul.006G059260 Phaseolus vulgaris HOM05D005351 ORTHO05D006542 4.7e-68 263.5 643 37.9
Nitab4.5_0003328g0090 Nicotiana tabacum HOM05D005351 ORTHO05D006542 6.1e-68 263.1 606 40.3
CAN.G492.50 Capsicum annuum HOM05D005351 ORTHO05D006542 1.0e-67 262.3 711 38.5
Rhsim04G0010500 Rhododendron simsii HOM05D005351 ORTHO05D006542 1.4e-67 261.9 691 37.3
Nitab4.5_0005478g0030 Nicotiana tabacum HOM05D005351 ORTHO05D006542 3.0e-67 260.8 683 38.1
VMungo0540G1402 Vigna mungo HOM05D005351 ORTHO05D006542 6.8e-67 259.6 721 36.2
MSTRG.15808 Avicennia marina HOM05D005351 ORTHO05D006542 4.4e-66 256.9 615 40.7
FvH4_3g42241 Fragaria vesca HOM05D005351 ORTHO05D006542 4.4e-66 256.9 565 41.2
Solyc10g005850.4 Solanum lycopersicum HOM05D005351 ORTHO05D006542 7.5e-66 256.1 718 36.1
Sopen10g001810 Solanum pennellii HOM05D005351 ORTHO05D006542 1.7e-65 255.0 732 36.5
Peaxi162Scf00018g00155 Petunia axillaris HOM05D005351 ORTHO05D006542 3.7e-65 253.8 678 36.6
CANSAT11G0508 Cannabis sativa HOM05D005351 ORTHO05D006542 4.8e-65 253.4 702 36.9
Sed0019267 Sechium edule HOM05D005351 ORTHO05D006542 4.8e-65 253.4 724 35.9
PSO210G4843 Papaver somniferum HOM05D005351 ORTHO05D006542 6.3e-65 253.1 619 40.9
PGR083G0334 Punica granatum HOM05D005351 ORTHO05D006542 6.3e-65 253.1 650 40.6
Dinv10362 Davidia involucrata HOM05D005351 ORTHO05D006542 1.8e-64 251.5 562 40.6
CsaV3_7G023840 Cucumis sativus L. HOM05D005351 ORTHO05D006542 2.4e-64 251.1 650 36.2
Aqoxy1G04296 Aquilegia oxysepala HOM05D005351 ORTHO05D006542 5.4e-64 250.0 603 38.3
Lj6g0009098 Lotus japonicus HOM05D005351 ORTHO05D006542 1.2e-63 248.8 615 39.2
Glyma.18G074300 Glycine max HOM05D005351 ORTHO05D006542 1.7e-62 245.0 642 37.1
Oeu049420.1 Olea europaea HOM05D005351 ORTHO05D006542 6.5e-62 243.0 635 39.1
Atru.chr2.3836 Acer truncatum HOM05D005351 ORTHO05D006542 8.5e-62 242.7 661 35.9
Glyma.08G332700 Glycine max HOM05D005351 ORTHO05D006542 8.5e-62 242.7 636 36.0
PSO210G4950 Papaver somniferum HOM05D005351 ORTHO05D006542 2.5e-61 241.1 629 39.6
Migut.M01635 Erythranthe guttata HOM05D005351 ORTHO05D006542 3.2e-61 240.7 587 38.7
Lj8A180G96 Lonicera japonica HOM05D005351 ORTHO05D006542 2.1e-60 238.0 624 37.8
ECA236G3149 Erigeron canadensis HOM05D005351 ORTHO05D006542 2.7e-60 237.7 584 37.0
ClCG09G021540 Citrullus lanatus HOM05D005351 ORTHO05D006542 6.1e-60 236.5 603 37.6
DCAR_013254 Daucus carota HOM05D005351 ORTHO05D006542 3.4e-58 230.7 616 39.6
AT3G13225 Arabidopsis thaliana HOM05D005351 ORTHO05D006542 5.7e-58 229.9 629 35.3
THA.LOC104815687 Tarenaya hassleriana HOM05D005351 ORTHO05D006542 9.8e-58 229.2 665 36.2
AL3G25030 Arabidopsis lyrata HOM05D005351 ORTHO05D006542 1.3e-57 228.8 625 36.3
Sp3g11430 Schrenkiella parvula HOM05D005351 ORTHO05D006542 1.3e-57 228.8 674 35.3
Aa31LG8G460 Aethionema arabicum HOM05D005351 ORTHO05D006542 1.7e-57 228.4 711 34.3
Medtr3g461030 Medicago truncatula HOM05D005351 ORTHO05D006542 1.7e-57 228.4 621 39.6
Lalb_Chr15g0082311 Lupinus albus HOM05D005351 ORTHO05D006542 1.8e-56 224.9 641 38.2
Carub.0003s1261 Capsella rubella HOM05D005351 ORTHO05D006542 5.4e-56 223.4 594 35.5
Psat5g166400 Pisum sativum HOM05D005351 ORTHO05D006542 1.2e-55 222.2 736 36.5
Ca_12455_v3 Cicer arietinum L. HOM05D005351 ORTHO05D006542 4.5e-55 220.3 722 34.2
HanXRQChr11g0334131 Helianthus annuus HOM05D005351 ORTHO05D006542 1.0e-54 219.2 613 36.4
MBI14_g37362_MAGBIO Magnolia biondii HOM05D005351 ORTHO05D006542 2.3e-54 218.0 588 37.1
ATR0751G017 Amborella trichopoda HOM05D005351 ORTHO05D006542 2.9e-54 217.6 770 32.5
TPR.G17956 Trifolium pratense HOM05D005351 ORTHO05D006542 3.8e-54 217.2 620 38.2
CARHR087840 Cardamine hirsuta HOM05D005351 ORTHO05D006542 6.6e-54 216.5 619 34.1
C01p51820 Brassica napus HOM05D005351 ORTHO05D006542 8.0e-52 209.5 689 35.3
Thhalv10020110m.g Eutrema salsugineum HOM05D005351 ORTHO05D006542 1.8e-51 208.4 613 36.1
unitig_0.g707 Utricularia gibba HOM05D005351 ORTHO05D006542 2.0e-50 204.9 706 33.3
BolC1t05130H Brassica oleracea HOM05D005351 ORTHO05D006542 4.4e-50 203.8 602 37.2
HPP92_017874 Vanilla planifolia HOM05D005351 ORTHO05D006542 4.4e-50 203.8 713 32.0
BcaC09g48295 Brassica carinata HOM05D005351 ORTHO05D006542 7.5e-50 203.0 602 37.2
A01p40300 Brassica napus HOM05D005351 ORTHO05D006542 2.0e-47 194.9 593 35.1
BraA01t04066Z Brassica rapa HOM05D005351 ORTHO05D006542 2.0e-47 194.9 593 35.1
BcaB04g21006 Brassica carinata HOM05D005351 ORTHO05D006542 2.1e-44 184.9 651 33.3
arahy.Tifrunner.gnm1.ann1.1R5J8M Arachis hypogaea HOM05D005351 ORTHO05D006542 2.8e-44 184.5 734 34.5
CDE05G2589 Ceratophyllum demersum HOM05D005351 ORTHO05D006542 8.9e-43 179.5 596 32.9
Zm00001eb381020 Zea mays HOM05D005351 ORTHO05D006542 1.3e-41 175.6 647 31.5
Os06g0298400 Oryza sativa ssp. japonica HOM05D005351 ORTHO05D006542 1.9e-40 171.8 627 32.9
SEGI_31992 Sequoiadendron giganteum HOM05D005351 ORTHO05D006542 1.9e-40 171.8 317 42.3
CDE05G0998 Ceratophyllum demersum HOM05D005351 ORTHO05D006542 2.4e-40 171.4 569 33.6
PSO782G2183 Papaver somniferum HOM05D005351 ORTHO05D006542 2.3e-38 164.9 131 71.0
arahy.Tifrunner.gnm1.ann1.LDHF9L Arachis hypogaea HOM05D005351 ORTHO05D006542 9.5e-37 159.5 728 33.0
MELO3C024969.2 Cucumis melo HOM05D005351 ORTHO05D006542 1.1e-35 156.0 573 32.8
Zm00001eb281160 Zea mays HOM05D005351 ORTHO05D006542 5.8e-34 150.2 665 30.8
Oeu017994.1 Olea europaea HOM05D005351 ORTHO05D006542 7.5e-34 149.8 130 66.2
Actinidia00844 Actinidia chinensis HOM05D005351 ORTHO05D006542 2.4e-32 144.8 356 37.6
Lsat_1_v5_gn_7_114900 Lactuca sativa HOM05D005351 ORTHO05D006542 1.3e-30 139.0 588 31.1
AagrBONN_evm.TU.Sc2ySwM_368.1722__1723 Anthoceros agrestis HOM05D005351 ORTHO05D006542 1.2e-26 125.9 179 47.5
Hma1.2p1_3473F.1_g336240 Hydrangea macrophylla HOM05D005351 ORTHO05D006542 1.2e-23 115.9 287 38.7
MBI14_g27041_MAGBIO Magnolia biondii HOM05D005351 ORTHO05D006542 4.6e-23 114.0 132 53.8
CBR_g12012 Chara braunii HOM05D005351 ORTHO05D006542 3.3e-21 107.8 235 41.7
vmacro11082 Vaccinium macrocarpon HOM05D000009 ORTHO05D006542 1.4e-19 102.4 97 60.8
SMO164G0196 Selaginella moellendorffii HOM05D005351 ORTHO05D006542 1.2e-18 99.4 135 47.4
Pp3c7_8580 Physcomitrium patens HOM05D005351 ORTHO05D006542 4.9e-17 94.0 225 39.1
AagrBONN_evm.TU.Sc2ySwM_368.1723 Anthoceros agrestis HOM05D005351 ORTHO05D006542 4.2e-16 90.9 135 48.1
HPP92_028497 Vanilla planifolia HOM05D005351 ORTHO05D006542 2.3e-14 85.1 209 33.5
CSS0030315 Camellia sinensis var. sinensis HOM05D005351 ORTHO05D006542 8.7e-14 83.2 80 50.0
CSS0028997 Camellia sinensis var. sinensis HOM05D005351 ORTHO05D006542 2.5e-13 81.6 92 42.4
Oeu017995.1 Olea europaea HOM05D005351 ORTHO05D006542 4.9e-09 67.4 143 35.0
Dinv10361 Davidia involucrata HOM05D005351 ORTHO05D006542 2.1e-07 62.0 54 55.6


User provided reference genes

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