Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sc03g0010980 Simmondsia chinensis HOM05D007739 ORTHO05D009838 1.4e-122 443.0 222 100.0
CSS0046040 Camellia sinensis var. sinensis HOM05D007739 ORTHO05D009838 2.3e-32 143.3 187 46.5
Dinv36186 Davidia involucrata HOM05D002367 ORTHO05D002566 1.2e-30 137.5 221 41.6
Cfa009840 Carpinus fangiana HOM05D007739 ORTHO05D009838 1.8e-29 133.7 179 44.1
Glyma.02G280600 Glycine max HOM05D007739 ORTHO05D009838 8.9e-29 131.3 186 44.1
Ca_06221_v3 Cicer arietinum L. HOM05D007739 ORTHO05D009838 1.5e-28 130.6 186 43.0
Rhsim01G0194300 Rhododendron simsii HOM05D007739 ORTHO05D009838 1.5e-28 130.6 186 43.0
Actinidia11663 Actinidia chinensis HOM05D007739 ORTHO05D009838 3.4e-28 129.4 162 45.1
CiPaw.14G114800 Carya illinoinensis HOM05D007739 ORTHO05D009838 3.4e-28 129.4 184 44.0
Phvul.008G200100 Phaseolus vulgaris HOM05D007739 ORTHO05D009838 2.2e-27 126.7 183 43.2
LjContig00049g0023861 Lotus japonicus HOM05D007739 ORTHO05D009838 6.4e-27 125.2 182 41.8
Glyma.14G034000 Glycine max HOM05D007739 ORTHO05D009838 5.4e-26 122.1 185 42.7
Haze_23208 Corylus avellana HOM05D007739 ORTHO05D009838 1.7e-24 117.1 138 46.4
Migut.D00651 Erythranthe guttata HOM05D007739 ORTHO05D009838 1.7e-24 117.1 196 41.3
GSVIVG01037253001 Vitis vinifera HOM05D007739 ORTHO05D009838 8.6e-24 114.8 191 42.4
Sp6g31280 Schrenkiella parvula HOM05D007739 ORTHO05D009838 1.5e-23 114.0 186 38.2
TAR633G0364 Trochodendron aralioides HOM05D007739 ORTHO05D009838 1.9e-23 113.6 182 40.1
DCAR_002115 Daucus carota HOM05D007739 ORTHO05D009838 2.5e-23 113.2 164 39.6
Peaxi162Scf00469g00320 Petunia axillaris HOM05D007739 ORTHO05D009838 2.5e-23 113.2 182 44.5
Potri.009G072000 Populus trichocarpa HOM05D007739 ORTHO05D009838 3.3e-23 112.8 162 44.4
TPR.G19359 Trifolium pratense HOM05D007739 ORTHO05D009838 1.6e-22 110.5 187 38.5
Cpa.g.sc157.69 Carica papaya HOM05D007739 ORTHO05D009838 4.7e-22 109.0 185 41.6
AL6G23160 Arabidopsis lyrata HOM05D007739 ORTHO05D009838 6.9e-21 105.1 192 39.1
Nitab4.5_0001095g0030 Nicotiana tabacum HOM05D007739 ORTHO05D009838 6.9e-21 105.1 185 41.1
SalBow6G6289 Salvia bowleyana HOM05D007739 ORTHO05D009838 8.9e-21 104.8 203 38.4
PGSC0003DMG400020420 Solanum tuberosum HOM05D007739 ORTHO05D009838 8.9e-21 104.8 181 40.3
MSTRG.21351 Avicennia marina HOM05D007739 ORTHO05D009838 3.4e-20 102.8 204 35.3
Nitab4.5_0006104g0010 Nicotiana tabacum HOM05D007739 ORTHO05D009838 5.8e-20 102.1 208 38.5
VMungo0647G2062 Vigna mungo HOM05D007739 ORTHO05D009838 2.2e-19 100.1 237 32.5
Aa31LG3G14870 Aethionema arabicum HOM05D007739 ORTHO05D009838 2.9e-19 99.8 185 37.8
ECA233G0993 Erigeron canadensis HOM05D007739 ORTHO05D009838 1.1e-18 97.8 180 38.3
PGR119G1777 Punica granatum HOM05D007739 ORTHO05D009838 1.1e-18 97.8 196 39.3
A03p38660 Brassica napus HOM05D007739 ORTHO05D009838 1.9e-18 97.1 188 34.6
BraA03t13013Z Brassica rapa HOM05D007739 ORTHO05D009838 1.9e-18 97.1 188 34.6
Solyc07g055110.3 Solanum lycopersicum HOM05D007739 ORTHO05D009838 1.9e-18 97.1 189 37.6
Sopen07g027120 Solanum pennellii HOM05D007739 ORTHO05D009838 2.4e-18 96.7 183 37.2
Thhalv10014740m.g Eutrema salsugineum HOM05D007739 ORTHO05D009838 3.2e-18 96.3 190 35.8
BolC9t59287H Brassica oleracea HOM05D007739 ORTHO05D009838 4.2e-18 95.9 187 35.3
A10p25460 Brassica napus HOM05D007739 ORTHO05D009838 5.4e-18 95.5 187 35.3
C09p64530 Brassica napus HOM05D007739 ORTHO05D009838 7.1e-18 95.1 187 34.8
BolC3t16943H Brassica oleracea HOM05D007739 ORTHO05D009838 7.1e-18 95.1 195 33.8
Cc01_g05640 Coffea canephora HOM05D007739 ORTHO05D009838 9.3e-18 94.7 191 37.2
Thhalv10021564m.g Eutrema salsugineum HOM05D007739 ORTHO05D009838 1.2e-17 94.4 190 34.2
C03p46780 Brassica napus HOM05D007739 ORTHO05D009838 1.6e-17 94.0 195 33.3
AT5G12360 Arabidopsis thaliana HOM05D007739 ORTHO05D009838 2.1e-17 93.6 190 37.4
BraA10t44610Z Brassica rapa HOM05D007739 ORTHO05D009838 2.1e-17 93.6 188 36.2
BcaC01g03953 Brassica carinata HOM05D007739 ORTHO05D009838 2.7e-17 93.2 194 34.0
CARHR200750 Cardamine hirsuta HOM05D007739 ORTHO05D009838 1.3e-16 90.9 171 37.4
BcaB04g18824 Brassica carinata HOM05D007739 ORTHO05D009838 2.3e-16 90.1 191 32.5
Sp3g12450 Schrenkiella parvula HOM05D007739 ORTHO05D009838 3.0e-16 89.7 190 33.2
THA.LOC104815614 Tarenaya hassleriana HOM05D007739 ORTHO05D009838 2.5e-15 86.7 179 36.9
SGA_v2.0_scaffold29G12264 Striga asiatica HOM05D007739 ORTHO05D009838 3.3e-15 86.3 188 34.0
THA.LOC104815612 Tarenaya hassleriana HOM05D007739 ORTHO05D009838 7.3e-15 85.1 143 38.5
Carub.0003s1380 Capsella rubella HOM05D007739 ORTHO05D009838 1.6e-14 84.0 174 33.3
CARHR089070 Cardamine hirsuta HOM05D007739 ORTHO05D009838 1.6e-14 84.0 199 34.2
AL3G26440 Arabidopsis lyrata HOM05D007739 ORTHO05D009838 8.1e-14 81.6 187 31.0
Lsat_1_v5_gn_5_70921 Lactuca sativa HOM05D007739 ORTHO05D009838 1.8e-13 80.5 177 36.2
AT3G14190 Arabidopsis thaliana HOM05D007739 ORTHO05D009838 2.4e-13 80.1 189 31.7
TAR633G2358 Trochodendron aralioides HOM05D007739 ORTHO05D009838 3.1e-13 79.7 183 35.0
BcaNung07312 Brassica carinata HOM05D007739 ORTHO05D009838 1.2e-12 77.8 190 34.2
C01p50440 Brassica napus HOM05D007739 ORTHO05D009838 2.0e-12 77.0 190 33.7
Oeu001493.2 Olea europaea HOM05D007739 ORTHO05D009838 3.4e-12 76.3 179 33.0
unitig_578.g16651 Utricularia gibba HOM05D007739 ORTHO05D009838 4.9e-11 72.4 166 32.5
BolC1t04996H Brassica oleracea HOM05D007739 ORTHO05D009838 4.2e-10 69.3 188 30.9
Nn7g36621 Nelumbo nucifera HOM05D007739 ORTHO05D009838 7.9e-09 65.1 121 37.2
A01p39500 Brassica napus HOM05D007739 ORTHO05D009838 1.1e-07 61.2 182 28.6
BraA01t03991Z Brassica rapa HOM05D007739 ORTHO05D009838 2.5e-07 60.1 182 28.0
Actinidia23986 Actinidia chinensis HOM05D006191 ORTHO05D007660 3.3e-07 59.7 67 46.3
Aa31LG8G1440 Aethionema arabicum HOM05D007739 ORTHO05D009838 5.6e-07 58.9 97 38.1
Aqoxy1G02236 Aquilegia oxysepala HOM05D007739 ORTHO05D009838 2.1e-06 57.0 166 30.1
COL.COLO4_10079 Corchorus olitorius HOM05D006494 ORTHO05D007787 2.1e-06 57.0 201 30.3
Hma1.2p1_0327F.1_g126290 Hydrangea macrophylla HOM05D006494 ORTHO05D007787 8.1e-06 55.1 191 29.3
PSO478G4343 Papaver somniferum HOM05D006494 ORTHO05D007787 8.1e-06 55.1 214 29.0


User provided reference genes

Program Settings