Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sc03g0010280 Simmondsia chinensis HOM05D004843 ORTHO05D005833 0.0e+00 1302.0 641 100.0
EL10Ac4g08285 Beta vulgaris HOM05D004843 ORTHO05D005833 1.2e-129 468.0 633 42.7
CSS0025192 Camellia sinensis var. sinensis HOM05D004843 ORTHO05D005833 8.3e-120 435.3 594 42.3
Dinv20222 Davidia involucrata HOM05D004843 ORTHO05D005833 1.4e-119 434.5 594 43.1
TAR627G0485 Trochodendron aralioides HOM05D004843 ORTHO05D005833 3.2e-119 433.3 597 43.6
Hund13862 Selenicereus undatus HOM05D004843 ORTHO05D005833 1.2e-118 431.4 729 38.1
AUR62036128 Chenopodium quinoa HOM05D004843 ORTHO05D005833 2.1e-118 430.6 628 40.8
GSVIVG01014249001 Vitis vinifera HOM05D004843 ORTHO05D005833 6.8e-114 415.6 592 41.2
Lj1C835G2 Lonicera japonica HOM05D004843 ORTHO05D005833 3.4e-113 413.3 596 43.0
Hma1.2p1_0416F.1_g148560 Hydrangea macrophylla HOM05D004843 ORTHO05D005833 5.8e-113 412.5 623 40.1
Actinidia35229 Actinidia chinensis HOM05D004843 ORTHO05D005833 1.3e-112 411.4 593 41.3
Oeu024378.1 Olea europaea HOM05D004843 ORTHO05D005833 6.0e-110 402.5 599 40.2
Ciclev10019192m.g Citrus clementina HOM05D004843 ORTHO05D005833 6.6e-109 399.1 621 39.1
CiPaw.08G115600 Carya illinoinensis HOM05D004843 ORTHO05D005833 2.1e-107 394.0 597 41.4
PGR031G2553 Punica granatum HOM05D004843 ORTHO05D005833 6.2e-107 392.5 588 40.6
Cfa019615 Carpinus fangiana HOM05D004843 ORTHO05D005833 1.4e-106 391.3 625 38.9
Nn1g06340 Nelumbo nucifera HOM05D004843 ORTHO05D005833 2.0e-105 387.5 591 39.3
Nitab4.5_0007508g0020 Nicotiana tabacum HOM05D004843 ORTHO05D005833 1.7e-104 384.4 604 39.4
Cc05_g11520 Coffea canephora HOM05D004843 ORTHO05D005833 2.4e-103 380.6 615 37.6
Glyma.12G227600 Glycine max HOM05D004843 ORTHO05D005833 9.3e-103 378.6 601 40.3
Prupe.4G172200 Prunus persica HOM05D004843 ORTHO05D005833 1.6e-102 377.9 595 39.5
TWI38G0787 Tripterygium wilfordii HOM05D004843 ORTHO05D005833 6.0e-102 375.9 600 39.2
AUR62019511 Chenopodium quinoa HOM05D004843 ORTHO05D005833 2.3e-101 374.0 574 40.4
MD03G1237200 Malus domestica HOM05D004843 ORTHO05D005833 2.3e-101 374.0 615 39.5
MD10G1064700 Malus domestica HOM05D004843 ORTHO05D005833 3.0e-101 373.6 617 39.7
QL11p026708 Quercus lobata HOM05D004843 ORTHO05D005833 6.6e-101 372.5 651 37.9
Phvul.005G067200 Phaseolus vulgaris HOM05D004843 ORTHO05D005833 1.5e-100 371.3 599 39.6
Solyc12g014090.2 Solanum lycopersicum HOM05D004843 ORTHO05D005833 1.9e-100 370.9 599 38.7
Glyma.13G272600 Glycine max HOM05D004843 ORTHO05D005833 4.3e-100 369.8 601 39.9
Sopen12g005870 Solanum pennellii HOM05D004843 ORTHO05D005833 5.6e-100 369.4 599 38.7
Duzib268G0207 Durio zibethinus HOM05D004843 ORTHO05D005833 1.6e-99 367.9 604 39.1
VMungo1080G1831 Vigna mungo HOM05D004843 ORTHO05D005833 6.2e-99 365.9 602 38.9
Lj3g0014260 Lotus japonicus HOM05D004843 ORTHO05D005833 1.1e-98 365.2 602 39.7
Manes.15G090500 Manihot esculenta HOM05D004843 ORTHO05D005833 1.8e-98 364.4 601 37.3
Eucgr.F03287 Eucalyptus grandis HOM05D004843 ORTHO05D005833 2.4e-98 364.0 606 38.6
Nitab4.5_0003077g0040 Nicotiana tabacum HOM05D004843 ORTHO05D005833 2.4e-98 364.0 605 38.0
AUR62026744 Chenopodium quinoa HOM05D004843 ORTHO05D005833 4.0e-98 363.2 513 42.1
MSTRG.12883 Avicennia marina HOM05D004843 ORTHO05D005833 2.0e-97 360.9 600 37.5
CAN.G765.5 Capsicum annuum HOM05D004843 ORTHO05D005833 5.8e-97 359.4 599 39.2
RcHm_v2.0_Chr6g0312691 Rosa chinensis HOM05D004843 ORTHO05D005833 5.8e-97 359.4 606 39.4
FvH4_3g19060 Fragaria vesca HOM05D004843 ORTHO05D005833 6.4e-96 355.9 611 39.1
vmacro09509 Vaccinium macrocarpon HOM05D004843 ORTHO05D005833 8.4e-96 355.5 645 36.3
RcHm_v2.0_Chr5g0031851 Rosa chinensis HOM05D004843 ORTHO05D005833 7.1e-95 352.4 632 38.6
FAN25G1696 Fragaria x ananassa HOM05D004843 ORTHO05D005833 7.9e-94 349.0 601 39.3
Lj1g0026777 Lotus japonicus HOM05D004843 ORTHO05D005833 1.3e-93 348.2 588 38.8
Psat5g240000 Pisum sativum HOM05D004843 ORTHO05D005833 1.3e-93 348.2 611 37.3
Sed0025158 Sechium edule HOM05D004843 ORTHO05D005833 6.7e-93 345.9 588 37.6
DCAR_021007 Daucus carota HOM05D004843 ORTHO05D005833 1.9e-92 344.4 603 38.5
Potri.012G106300 Populus trichocarpa HOM05D004843 ORTHO05D005833 1.9e-92 344.4 612 35.8
Gohir.A04G036900 Gossypium hirsutum HOM05D004843 ORTHO05D005833 7.4e-92 342.4 607 37.2
Gohir.D05G347266 Gossypium hirsutum HOM05D004843 ORTHO05D005833 7.4e-92 342.4 609 37.4
Gorai.009G374700 Gossypium raimondii HOM05D004843 ORTHO05D005833 6.2e-91 339.3 609 37.8
Lsat_1_v5_gn_5_128660 Lactuca sativa HOM05D004843 ORTHO05D005833 8.1e-91 339.0 597 36.9
Rhsim04G0023600 Rhododendron simsii HOM05D004843 ORTHO05D005833 1.4e-90 338.2 689 34.3
Aqoxy4G00544 Aquilegia oxysepala HOM05D004843 ORTHO05D005833 1.5e-89 334.7 617 36.5
Oeu061997.2 Olea europaea HOM05D004843 ORTHO05D005833 4.5e-89 333.2 571 38.2
MELO3C016086.2 Cucumis melo HOM05D004843 ORTHO05D005833 7.6e-89 332.4 610 36.2
arahy.Tifrunner.gnm1.ann1.60B7R0 Arachis hypogaea HOM05D004843 ORTHO05D005833 4.9e-88 329.7 611 35.0
SGA_v2.0_scaffold70G23704 Striga asiatica HOM05D004843 ORTHO05D005833 2.5e-87 327.4 602 35.0
Sabra12G0078800 Salix brachista HOM05D004843 ORTHO05D005833 2.7e-86 323.9 664 33.6
CSS0012812 Camellia sinensis var. sinensis HOM05D004843 ORTHO05D005833 4.6e-86 323.2 443 41.5
Oeu061325.2 Olea europaea HOM05D004843 ORTHO05D005833 4.6e-86 323.2 540 37.4
TPR.G29644 Trifolium pratense HOM05D004843 ORTHO05D005833 1.3e-85 321.6 605 36.9
FAN11G0804 Fragaria x ananassa HOM05D004843 ORTHO05D005833 1.8e-85 321.2 611 37.2
Cpa.g.sc131.81 Carica papaya HOM05D004843 ORTHO05D005833 3.9e-85 320.1 605 34.7
Lalb_Chr25g0286141 Lupinus albus HOM05D004843 ORTHO05D005833 1.9e-84 317.8 584 36.8
Medtr2g078390 Medicago truncatula HOM05D004843 ORTHO05D005833 2.5e-84 317.4 617 35.5
CsaV3_4G008440 Cucumis sativus L. HOM05D004843 ORTHO05D005833 5.7e-84 316.2 587 35.6
arahy.Tifrunner.gnm1.ann1.G1PXE9 Arachis hypogaea HOM05D004843 ORTHO05D005833 1.8e-82 311.2 590 34.7
ClCG07G009890 Citrullus lanatus HOM05D004843 ORTHO05D005833 3.4e-81 307.0 629 33.9
HanXRQChr10g0302381 Helianthus annuus HOM05D004843 ORTHO05D005833 3.4e-81 307.0 615 34.6
THA.LOC104798752 Tarenaya hassleriana HOM05D004843 ORTHO05D005833 3.4e-81 307.0 599 34.7
DCAR_031588 Daucus carota HOM05D004843 ORTHO05D005833 2.9e-80 303.9 566 37.6
Migut.H01969 Erythranthe guttata HOM05D004843 ORTHO05D005833 1.1e-76 292.0 658 32.5
Peaxi162Scf00000g02614 Petunia axillaris HOM05D004843 ORTHO05D005833 2.5e-76 290.8 460 38.9
SalBow7G4166 Salvia bowleyana HOM05D004843 ORTHO05D005833 1.5e-73 281.6 545 35.6
Aa31LG6G6390 Aethionema arabicum HOM05D000944 ORTHO05D003581 5.9e-73 279.6 591 33.3
Thecc.07G102200 Theobroma cacao HOM05D004843 ORTHO05D005833 3.1e-66 257.3 287 46.0
ATR0165G025 Amborella trichopoda HOM05D004843 ORTHO05D005833 1.5e-65 255.0 588 31.5
PSO210G0781 Papaver somniferum HOM05D004843 ORTHO05D005833 1.0e-64 252.3 616 33.3
PSO832G1805 Papaver somniferum HOM05D004843 ORTHO05D005833 1.7e-64 251.5 615 32.7
CARHR043430 Cardamine hirsuta HOM05D004843 ORTHO05D005833 2.5e-63 247.7 594 31.6
Thhalv10011326m.g Eutrema salsugineum HOM05D004843 ORTHO05D005833 7.2e-63 246.1 612 31.5
Glyma.13G009900 Glycine max HOM05D004843 ORTHO05D005833 1.2e-62 245.4 527 32.4
Carub.0001s4239 Capsella rubella HOM05D004843 ORTHO05D005833 1.0e-61 242.3 587 30.8
AT1G53200 Arabidopsis thaliana HOM05D004843 ORTHO05D005833 4.4e-60 236.9 607 31.0
AL1G61600 Arabidopsis lyrata HOM05D004843 ORTHO05D005833 2.8e-59 234.2 593 31.9
BolC6t36637H Brassica oleracea HOM05D004843 ORTHO05D005833 8.2e-59 232.6 606 31.5
BcaB02g10938 Brassica carinata HOM05D004843 ORTHO05D005833 1.8e-58 231.5 584 32.4
CiPaw.11G165700 Carya illinoinensis HOM05D004843 ORTHO05D005833 7.0e-58 229.6 614 32.9
C06p14590 Brassica napus HOM05D004843 ORTHO05D005833 2.0e-57 228.0 585 32.1
BcaC08g44060 Brassica carinata HOM05D004843 ORTHO05D005833 4.5e-57 226.9 582 32.1
Zm00001eb280030 Zea mays HOM05D004843 ORTHO05D005833 1.3e-56 225.3 580 30.2
Sp1g39780 Schrenkiella parvula HOM05D004843 ORTHO05D005833 8.5e-56 222.6 598 30.6
A05p18490 Brassica napus HOM05D004843 ORTHO05D005833 1.2e-54 218.8 606 31.2
unitig_26.g10042 Utricularia gibba HOM05D004843 ORTHO05D005833 1.2e-54 218.8 455 32.7
BraA05t20741Z Brassica rapa HOM05D004843 ORTHO05D005833 2.1e-54 218.0 586 31.7
HPP92_010831 Vanilla planifolia HOM05D004843 ORTHO05D005833 2.7e-54 217.6 508 30.1
MBI02_g30880_MAGBIO Magnolia biondii HOM05D004843 ORTHO05D005833 3.6e-54 217.2 444 35.4
Os06g0244100 Oryza sativa ssp. japonica HOM05D004843 ORTHO05D005833 6.1e-54 216.5 580 30.0
Thhalv10028227m.g Eutrema salsugineum HOM05D004843 ORTHO05D005833 3.0e-53 214.2 578 31.0
Thecc.07G102000 Theobroma cacao HOM05D004843 ORTHO05D005833 3.9e-53 213.8 271 42.4
Phvul.005G068700 Phaseolus vulgaris HOM05D004843 ORTHO05D005833 2.0e-52 211.5 452 34.5
HPP92_010833 Vanilla planifolia HOM05D004843 ORTHO05D005833 7.4e-52 209.5 416 33.2
Haze_09370 Corylus avellana HOM05D004843 ORTHO05D005833 3.7e-51 207.2 454 32.6
SEGI_17777 Sequoiadendron giganteum HOM05D004843 ORTHO05D005833 3.1e-50 204.1 571 29.1
CDE10G0946 Ceratophyllum demersum HOM05D004843 ORTHO05D005833 1.2e-49 202.2 442 32.4
ECA234G3172 Erigeron canadensis HOM05D004843 ORTHO05D005833 2.0e-49 201.4 309 40.1
Atru.chr2.138 Acer truncatum HOM05D004843 ORTHO05D005833 2.6e-49 201.1 212 46.2
SalBow7G4326 Salvia bowleyana HOM05D004843 ORTHO05D005833 1.0e-48 199.1 455 34.1
Aqoxy7G02743 Aquilegia oxysepala HOM05D004843 ORTHO05D005833 8.5e-48 196.1 256 41.8
TWI31G0686 Tripterygium wilfordii HOM05D004843 ORTHO05D005833 6.1e-46 189.9 255 43.1
Ca_15018_v3 Cicer arietinum L. HOM05D004843 ORTHO05D005833 3.4e-44 184.1 399 36.3
A06p01130 Brassica napus HOM05D004843 ORTHO05D005833 1.8e-37 161.8 273 38.1
Thecc.07G101600 Theobroma cacao HOM05D004843 ORTHO05D005833 7.5e-36 156.4 170 43.5
Thecc.07G101400 Theobroma cacao HOM05D004843 ORTHO05D005833 1.8e-34 151.8 161 46.0
DCAR_032123 Daucus carota HOM05D004843 ORTHO05D005833 1.6e-33 148.7 167 47.9
C06p08970 Brassica napus HOM05D004843 ORTHO05D005833 7.7e-33 146.4 218 40.4
Mapoly0139s0008 Marchantia polymorpha HOM05D004843 ORTHO05D005833 5.0e-32 143.7 579 26.8
BcaC08g43511 Brassica carinata HOM05D004843 ORTHO05D005833 5.5e-31 140.2 460 30.7
BolC6t35976H Brassica oleracea HOM05D004843 ORTHO05D005833 5.5e-31 140.2 234 38.5
Oeu027285.1 Olea europaea HOM05D004843 ORTHO05D005833 9.5e-31 139.4 164 45.1
Aa31sc1038G10 Aethionema arabicum HOM05D004843 ORTHO05D005833 3.6e-30 137.5 471 28.5
Oeu038157.2 Olea europaea HOM05D004843 ORTHO05D005833 1.4e-29 135.6 239 38.5
Ca_04025_v3 Cicer arietinum L. HOM05D004843 ORTHO05D005833 2.3e-29 134.8 304 35.5
Pp3c12_9280 Physcomitrium patens HOM05D004843 ORTHO05D005833 5.2e-29 133.7 559 26.1
Oeu018948.1 Olea europaea HOM05D004843 ORTHO05D005833 6.8e-29 133.3 308 32.5
Atru.chr2.140 Acer truncatum HOM05D004843 ORTHO05D005833 1.3e-27 129.0 154 49.4
Thecc.07G102300 Theobroma cacao HOM05D004843 ORTHO05D005833 2.9e-24 117.9 189 38.1
CAN.G349.2 Capsicum annuum HOM05D004843 ORTHO05D005833 5.6e-23 113.6 139 43.2
AagrBONN_evm.TU.Sc2ySwM_228.3860 Anthoceros agrestis HOM05D004843 ORTHO05D005833 5.8e-20 103.6 262 27.9
CAN.G349.3 Capsicum annuum HOM05D004843 ORTHO05D005833 1.6e-17 95.5 267 30.7
BraA06t23340Z Brassica rapa HOM05D004843 ORTHO05D005833 1.0e-16 92.8 166 37.3
SHI27679 Sapria himalayana HOM05D000105 ORTHO05D000023 1.8e-13 82.0 106 41.5
Oeu052598.1 Olea europaea HOM05D004843 ORTHO05D005833 2.8e-06 58.2 59 49.2


User provided reference genes

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