Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sc03g0009090 Simmondsia chinensis HOM05D005485 ORTHO05D007343 3.2e-93 345.1 183 100.0
Sc03g0008990 Simmondsia chinensis HOM05D005485 ORTHO05D007343 3.2e-56 222.2 171 71.9
Sc03g0008940 Simmondsia chinensis HOM05D005485 ORTHO05D007343 4.3e-53 211.8 171 68.4
Sc03g0009010 Simmondsia chinensis HOM05D005485 ORTHO05D007343 3.9e-38 162.2 169 53.3
Sc16g0006410 Simmondsia chinensis HOM05D005485 ORTHO05D007343 3.6e-36 155.6 172 54.7
Sc16g0006490 Simmondsia chinensis HOM05D005485 ORTHO05D007343 1.1e-35 154.1 172 51.7
Sc16g0006460 Simmondsia chinensis HOM05D005485 ORTHO05D007343 6.9e-35 151.4 171 53.8
EL10Ac6g15586 Beta vulgaris HOM05D005485 ORTHO05D007343 2.1e-31 139.8 165 50.3
EL10Ac3g06092 Beta vulgaris HOM05D005485 ORTHO05D007343 1.8e-30 136.7 165 48.5
EL10Ac4g07981 Beta vulgaris HOM05D005485 ORTHO05D007343 8.7e-30 134.4 179 43.6
Hund23309 Selenicereus undatus HOM05D005485 ORTHO05D007343 3.3e-29 132.5 154 49.4
Ah.06g182180 Amaranthus hybridus HOM05D005485 ORTHO05D007343 5.6e-29 131.7 171 43.9
Ah.06g183040 Amaranthus hybridus HOM05D005485 ORTHO05D007343 6.2e-28 128.3 171 44.4
Ah.11g046570 Amaranthus hybridus HOM05D005485 ORTHO05D007343 1.1e-27 127.5 153 45.8
AUR62000944 Chenopodium quinoa HOM05D005485 ORTHO05D007343 1.1e-27 127.5 171 43.9
Hund23314 Selenicereus undatus HOM05D005485 ORTHO05D007343 1.1e-27 127.5 154 48.1
EL10Ac4g08005 Beta vulgaris HOM05D005485 ORTHO05D007343 1.4e-27 127.1 169 44.4
AUR62022538 Chenopodium quinoa HOM05D005485 ORTHO05D007343 5.3e-27 125.2 165 47.9
AUR62044278 Chenopodium quinoa HOM05D005485 ORTHO05D007343 5.3e-27 125.2 165 47.9
Ah.02g116590 Amaranthus hybridus HOM05D005485 ORTHO05D007343 6.9e-27 124.8 165 46.1
Ah.12g053500 Amaranthus hybridus HOM05D005485 ORTHO05D007343 6.9e-27 124.8 165 43.0
Ah.14g079940 Amaranthus hybridus HOM05D005485 ORTHO05D007343 6.9e-27 124.8 171 39.8
EL10Ac4g07717 Beta vulgaris HOM05D005485 ORTHO05D007343 9.0e-27 124.4 170 42.9
Sc05g0005310 Simmondsia chinensis HOM05D005485 ORTHO05D007343 9.0e-27 124.4 96 68.8
EL10Ac4g07715 Beta vulgaris HOM05D005485 ORTHO05D010325 2.0e-26 123.2 170 42.9
EL10Ac4g07712 Beta vulgaris HOM05D005485 ORTHO05D007343 3.4e-26 122.5 166 42.8
Ah.14g079930 Amaranthus hybridus HOM05D005485 ORTHO05D007343 9.9e-26 120.9 171 38.6
Ah.12g053520 Amaranthus hybridus HOM05D005485 ORTHO05D007343 2.2e-25 119.8 159 44.7
EL10Ac4g08008 Beta vulgaris HOM05D005485 ORTHO05D007343 4.9e-25 118.6 164 43.9
Ah.03g136680 Amaranthus hybridus HOM05D005485 ORTHO05D007343 4.2e-24 115.5 171 40.9
EL10Ac4g09276 Beta vulgaris HOM05D005485 ORTHO05D007343 5.5e-24 115.2 148 45.3
EL10Ac3g05678 Beta vulgaris HOM05D005485 ORTHO05D007343 1.6e-23 113.6 187 40.1
Ah.16g108490 Amaranthus hybridus HOM05D005485 ORTHO05D007343 2.1e-23 113.2 183 38.8
AUR62020370 Chenopodium quinoa HOM05D005485 ORTHO05D007343 7.9e-23 111.3 166 41.0
Ah.06g182120 Amaranthus hybridus HOM05D005485 ORTHO05D007343 1.8e-22 110.2 170 40.6
AUR62020319 Chenopodium quinoa HOM05D005485 ORTHO05D007343 2.3e-22 109.8 166 41.0
AUR62031850 Chenopodium quinoa HOM05D005485 ORTHO05D007343 2.3e-22 109.8 166 41.0
AUR62015643 Chenopodium quinoa HOM05D005485 ORTHO05D026998 3.0e-22 109.4 173 41.0
AUR62020485 Chenopodium quinoa HOM05D005485 ORTHO05D007343 3.0e-22 109.4 169 40.2
EL10Ac4g07974 Beta vulgaris HOM05D005485 ORTHO05D026998 3.9e-22 109.0 170 40.6
EL10Ac3g07381 Beta vulgaris HOM05D005485 ORTHO05D007343 7.4e-21 104.8 161 37.3
AUR62020371 Chenopodium quinoa HOM05D005485 ORTHO05D007343 1.3e-20 104.0 169 40.8
AUR62034285 Chenopodium quinoa HOM05D005485 ORTHO05D007343 1.6e-20 103.6 170 40.6
AUR62001099 Chenopodium quinoa HOM05D005485 ORTHO05D007343 2.1e-20 103.2 180 37.8
AUR62020557 Chenopodium quinoa HOM05D005485 ORTHO05D007343 2.1e-20 103.2 173 39.3
AUR62035968 Chenopodium quinoa HOM05D005485 ORTHO05D007343 2.8e-20 102.8 147 41.5
Hund23316 Selenicereus undatus HOM05D005485 ORTHO05D007343 6.2e-20 101.7 148 41.9
Ah.12g053560 Amaranthus hybridus HOM05D005485 ORTHO05D007343 1.1e-19 100.9 141 44.0
AUR62020486 Chenopodium quinoa HOM05D005485 ORTHO05D007343 1.1e-19 100.9 171 36.3
Ah.11g050920 Amaranthus hybridus HOM05D005485 ORTHO05D000152 1.8e-19 100.1 126 44.4
AUR62020336 Chenopodium quinoa HOM05D003198 ORTHO05D003716 2.4e-19 99.8 174 38.5
AUR62035401 Chenopodium quinoa HOM05D005485 ORTHO05D007343 6.9e-19 98.2 172 37.2
Sc16g0006450 Simmondsia chinensis HOM05D005485 ORTHO05D007343 9.0e-19 97.8 146 47.3
Sc03g0009050 Simmondsia chinensis HOM05D005485 ORTHO05D007343 1.5e-18 97.1 88 55.7
Sc16g0006480 Simmondsia chinensis HOM05D005485 ORTHO05D007343 2.6e-18 96.3 171 41.5
AUR62015889 Chenopodium quinoa HOM05D005485 ORTHO05D007343 4.5e-18 95.5 172 34.3
EL10Ac4g09247 Beta vulgaris HOM05D005485 ORTHO05D007343 5.8e-18 95.1 115 46.1
Ah.07g199850 Amaranthus hybridus HOM05D005485 ORTHO05D007343 7.6e-18 94.7 131 40.5
AUR62020487 Chenopodium quinoa HOM05D005485 ORTHO05D007343 7.6e-18 94.7 170 39.4
AUR62043968 Chenopodium quinoa HOM05D005485 ORTHO05D007343 1.3e-17 94.0 153 37.3
TAR627G0592 Trochodendron aralioides HOM05D000264 ORTHO05D000152 8.4e-17 91.3 137 43.8
Hma1.2p1_2500F.1_g323380 Hydrangea macrophylla HOM05D000264 ORTHO05D000152 2.5e-16 89.7 146 38.4
Ah.07g198250 Amaranthus hybridus HOM05D005485 ORTHO05D007343 5.5e-16 88.6 163 38.7
AUR62005064 Chenopodium quinoa HOM05D005485 ORTHO05D007343 7.1e-16 88.2 108 49.1
TAR627G0379 Trochodendron aralioides HOM05D000264 ORTHO05D000152 1.6e-15 87.0 134 41.0
EL10Ac3g05160 Beta vulgaris HOM05D007624 ORTHO05D010285 3.5e-15 85.9 133 41.4
AUR62032021 Chenopodium quinoa HOM05D005485 ORTHO05D007343 6.0e-15 85.1 101 49.5
AUR62044255 Chenopodium quinoa HOM05D005485 ORTHO05D007343 6.0e-15 85.1 101 49.5
Hund00169 Selenicereus undatus HOM05D007624 ORTHO05D010285 2.3e-14 83.2 137 40.9
AUR62029830 Chenopodium quinoa HOM05D007624 ORTHO05D010285 3.0e-14 82.8 142 35.9
Hund23280 Selenicereus undatus HOM05D007624 ORTHO05D010285 5.1e-14 82.0 149 38.9
EL10Ac4g09146 Beta vulgaris HOM05D007624 ORTHO05D010285 6.7e-14 81.6 142 37.3
AUR62004959 Chenopodium quinoa HOM05D007624 ORTHO05D000152 1.1e-13 80.9 142 36.6
TAR636G0886 Trochodendron aralioides HOM05D000264 ORTHO05D000152 1.9e-13 80.1 137 40.1
AUR62001283 Chenopodium quinoa HOM05D007624 ORTHO05D010285 2.5e-13 79.7 155 35.5
vmacro19094 Vaccinium macrocarpon HOM05D000264 ORTHO05D000152 2.5e-13 79.7 136 39.7
Ah.03g144460 Amaranthus hybridus HOM05D005485 ORTHO05D007343 3.3e-13 79.3 77 53.2
Ah.12g053540 Amaranthus hybridus HOM05D005485 ORTHO05D007343 3.3e-13 79.3 95 45.3
Rhsim04G0028700 Rhododendron simsii HOM05D000264 ORTHO05D000152 4.3e-13 79.0 158 38.0
AUR62004787 Chenopodium quinoa HOM05D005485 ORTHO05D007343 7.4e-13 78.2 151 35.8
AUR62015888 Chenopodium quinoa HOM05D005485 ORTHO05D007343 7.4e-13 78.2 170 32.9
TAR627G0419 Trochodendron aralioides HOM05D000264 ORTHO05D000152 9.7e-13 77.8 142 42.3
Rhsim04G0028600 Rhododendron simsii HOM05D000264 ORTHO05D000152 1.3e-12 77.4 136 39.7
Rhsim07G0250800 Rhododendron simsii HOM05D000264 ORTHO05D000152 1.3e-12 77.4 136 39.7
AUR62001000 Chenopodium quinoa HOM05D002023 ORTHO05D002049 1.6e-12 77.0 133 37.6
TAR636G3343 Trochodendron aralioides HOM05D000264 ORTHO05D000152 2.2e-12 76.6 137 39.4
AUR62004962 Chenopodium quinoa HOM05D007624 ORTHO05D010285 2.8e-12 76.3 142 34.5
EL10Ac7g18078 Beta vulgaris HOM05D007624 ORTHO05D010285 3.7e-12 75.9 161 34.8
EL10Ac9g22886 Beta vulgaris HOM05D007624 ORTHO05D010285 6.3e-12 75.1 146 34.2
AUR62010290 Chenopodium quinoa HOM05D005485 ORTHO05D007343 8.2e-12 74.7 113 38.1
Sc16g0006540 Simmondsia chinensis HOM05D005485 ORTHO05D007343 1.1e-11 74.3 95 49.5
Sc16g0006550 Simmondsia chinensis HOM05D005485 ORTHO05D007343 1.1e-11 74.3 60 63.3
Rhsim04G0029200 Rhododendron simsii HOM05D000264 ORTHO05D000152 1.4e-11 73.9 126 41.3
RhsimUnG0230500 Rhododendron simsii HOM05D000264 ORTHO05D000152 1.4e-11 73.9 126 41.3
EL10As7g23759 Beta vulgaris HOM05D007624 ORTHO05D010285 1.8e-11 73.6 137 35.0
Hund02128 Selenicereus undatus HOM05D005485 ORTHO05D007343 1.8e-11 73.6 174 35.6
EL10Ac7g18082 Beta vulgaris HOM05D007624 ORTHO05D010285 2.4e-11 73.2 146 32.9
EL10Ac9g22579 Beta vulgaris HOM05D005485 ORTHO05D007343 2.4e-11 73.2 135 32.6
Ah.08g218070 Amaranthus hybridus HOM05D007624 ORTHO05D010285 3.1e-11 72.8 114 39.5
Sc14g0004990 Simmondsia chinensis HOM05D005485 ORTHO05D007343 3.1e-11 72.8 88 46.6
EL10Ac7g18061 Beta vulgaris HOM05D007624 ORTHO05D010285 4.1e-11 72.4 169 29.6
EL10Ac4g09157 Beta vulgaris HOM05D007624 ORTHO05D000152 6.9e-11 71.6 142 33.1
Hund30584 Selenicereus undatus HOM05D005485 ORTHO05D007343 6.9e-11 71.6 130 36.2
EL10Ac4g09124 Beta vulgaris HOM05D007624 ORTHO05D010285 1.2e-10 70.9 137 35.0
EL10Ac7g18063 Beta vulgaris HOM05D007624 ORTHO05D010285 1.2e-10 70.9 131 34.4
EL10Ac7g18079 Beta vulgaris HOM05D007624 ORTHO05D010285 1.2e-10 70.9 131 35.9
AUR62001268 Chenopodium quinoa HOM05D007624 ORTHO05D010285 1.2e-10 70.9 149 37.6
EL10Ac7g18064 Beta vulgaris HOM05D007624 ORTHO05D010285 1.5e-10 70.5 134 35.8
Hund02127 Selenicereus undatus HOM05D005485 ORTHO05D007343 2.0e-10 70.1 167 35.3
Hund21259 Selenicereus undatus HOM05D005485 ORTHO05D007343 4.5e-10 68.9 73 49.3
EL10Ac9g21582 Beta vulgaris HOM05D007624 ORTHO05D010285 1.0e-09 67.8 133 33.8
Sc16g0006510 Simmondsia chinensis HOM05D005485 ORTHO05D007343 2.9e-09 66.2 79 51.9
AUR62025722 Chenopodium quinoa HOM05D007624 ORTHO05D010285 1.1e-08 64.3 147 31.3
AUR62001285 Chenopodium quinoa HOM05D007624 ORTHO05D010285 3.2e-08 62.8 146 31.5
Sc19g0005690 Simmondsia chinensis HOM05D005485 ORTHO05D007343 3.2e-08 62.8 132 32.6
Rhsim04G0034200 Rhododendron simsii HOM05D000264 ORTHO05D000152 5.5e-08 62.0 134 31.3
AUR62026818 Chenopodium quinoa HOM05D007624 ORTHO05D010285 9.4e-08 61.2 171 28.1
Dinv40705 Davidia involucrata HOM05D000264 ORTHO05D000152 9.4e-08 61.2 160 35.6
AUR62025721 Chenopodium quinoa HOM05D007624 ORTHO05D010285 1.2e-07 60.8 136 30.1
Hund16575 Selenicereus undatus HOM05D000264 ORTHO05D000152 1.6e-07 60.5 159 32.7
AUR62037233 Chenopodium quinoa HOM05D007624 ORTHO05D010285 2.1e-07 60.1 171 27.5
Rhsim04G0029100 Rhododendron simsii HOM05D000264 ORTHO05D000152 2.1e-07 60.1 171 29.8
GSVIVG01027206001 Vitis vinifera HOM05D000264 ORTHO05D000152 2.1e-07 60.1 138 34.8
AT4G03460 Arabidopsis thaliana HOM05D000264 ORTHO05D000152 3.6e-07 59.3 155 32.3
AUR62020318 Chenopodium quinoa HOM05D005485 ORTHO05D007343 3.6e-07 59.3 126 34.1
AUR62037234 Chenopodium quinoa HOM05D007624 ORTHO05D010285 3.6e-07 59.3 171 28.1
Ciclev10004698m.g Citrus clementina HOM05D000264 ORTHO05D000152 3.6e-07 59.3 150 33.3
Sc03g0009030 Simmondsia chinensis HOM05D005485 ORTHO05D007343 4.6e-07 58.9 48 62.5
Carub.0006s3361 Capsella rubella HOM05D000264 ORTHO05D000152 1.0e-06 57.8 155 31.0
EL10Ac3g06720 Beta vulgaris HOM05D000264 ORTHO05D000152 1.4e-06 57.4 127 37.0
AUR62035354 Chenopodium quinoa HOM05D000264 ORTHO05D000152 1.4e-06 57.4 155 31.0
Rhsim06G0145300 Rhododendron simsii HOM05D000264 ORTHO05D000152 1.4e-06 57.4 150 28.7
AUR62035892 Chenopodium quinoa HOM05D000264 ORTHO05D000152 1.8e-06 57.0 146 32.2
TAR376G1123 Trochodendron aralioides HOM05D000264 ORTHO05D000152 1.8e-06 57.0 144 34.7
Ciclev10004944m.g Citrus clementina HOM05D000264 ORTHO05D000152 2.3e-06 56.6 140 34.3
Rhsim07G0250900 Rhododendron simsii HOM05D000264 ORTHO05D000152 3.0e-06 56.2 137 29.9
AUR62025426 Chenopodium quinoa HOM05D007624 ORTHO05D010285 3.9e-06 55.8 153 32.7
Gohir.A08G162800 Gossypium hirsutum HOM05D000264 ORTHO05D000152 3.9e-06 55.8 167 30.5
Nn1g06999 Nelumbo nucifera HOM05D000264 ORTHO05D000152 3.9e-06 55.8 135 30.4
Rhsim06G0144600 Rhododendron simsii HOM05D000264 ORTHO05D000152 3.9e-06 55.8 150 28.7
RhsimUnG0050600 Rhododendron simsii HOM05D000264 ORTHO05D000152 3.9e-06 55.8 121 36.4
EL10Ac8g19127 Beta vulgaris HOM05D007624 ORTHO05D010285 5.1e-06 55.5 91 37.4
AUR62038097 Chenopodium quinoa HOM05D005485 ORTHO05D007343 5.1e-06 55.5 66 39.4
Ah.03g134300 Amaranthus hybridus HOM05D000264 ORTHO05D000152 6.7e-06 55.1 151 35.1
Gorai.004G191800 Gossypium raimondii HOM05D000264 ORTHO05D000152 6.7e-06 55.1 163 28.8
Ciclev10007797m.g Citrus clementina HOM05D000264 ORTHO05D000152 8.8e-06 54.7 132 29.5
RhsimUnG0230300 Rhododendron simsii HOM05D000264 ORTHO05D000152 8.8e-06 54.7 137 29.9
Sabra19G0115700 Salix brachista HOM05D000264 ORTHO05D000152 8.8e-06 54.7 104 34.6
Sabra19G0137500 Salix brachista HOM05D000264 ORTHO05D000152 8.8e-06 54.7 142 31.0
GSVIVG01036243001 Vitis vinifera HOM05D000264 ORTHO05D000152 8.8e-06 54.7 134 30.6


User provided reference genes

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