Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sc03g0008610 Simmondsia chinensis HOM05D006489 ORTHO05D007556 1.0e-207 726.5 368 100.0
TAR627G0165 Trochodendron aralioides HOM05D006489 ORTHO05D007556 1.4e-79 300.8 364 49.2
vmacro09717 Vaccinium macrocarpon HOM05D006489 ORTHO05D007556 1.4e-79 300.8 357 48.5
Actinidia35341 Actinidia chinensis HOM05D006489 ORTHO05D007556 5.4e-79 298.9 363 48.5
RhsimUnG0250900 Rhododendron simsii HOM05D006489 ORTHO05D007556 3.3e-76 289.7 355 47.6
Hund23251 Selenicereus undatus HOM05D006489 ORTHO05D007556 1.8e-74 283.9 374 48.7
Duzib213G0414 Durio zibethinus HOM05D006489 ORTHO05D007556 1.7e-72 277.3 357 44.8
AUR62015766 Chenopodium quinoa HOM05D006489 ORTHO05D007556 2.2e-72 276.9 440 41.1
Dinv22265 Davidia involucrata HOM05D006489 ORTHO05D007556 2.2e-72 276.9 345 46.7
Hma1.2p1_1162F.1_g262610 Hydrangea macrophylla HOM05D006489 ORTHO05D007556 1.6e-70 270.8 356 46.6
Gorai.004G027700 Gossypium raimondii HOM05D006489 ORTHO05D007556 1.7e-69 267.3 361 44.6
Gohir.D08G030200 Gossypium hirsutum HOM05D006489 ORTHO05D007556 1.5e-68 264.2 360 43.9
CSS0036232 Camellia sinensis var. sinensis HOM05D006489 ORTHO05D007556 1.9e-68 263.8 380 42.6
CSS0017234 Camellia sinensis var. sinensis HOM05D006489 ORTHO05D007556 2.1e-67 260.4 380 42.4
COL.COLO4_19762 Corchorus olitorius HOM05D006489 ORTHO05D007556 8.0e-67 258.5 359 43.5
Ciclev10008166m.g Citrus clementina HOM05D006489 ORTHO05D007556 2.3e-66 256.9 367 46.0
Potri.011G139200 Populus trichocarpa HOM05D006489 ORTHO05D007556 3.1e-66 256.5 365 44.9
EL10Ac4g07823 Beta vulgaris HOM05D006489 ORTHO05D007556 2.6e-65 253.4 394 41.1
Haze_09673 Corylus avellana HOM05D006489 ORTHO05D007556 4.4e-65 252.7 415 37.8
CAN.G337.129 Capsicum annuum HOM05D006489 ORTHO05D007556 7.5e-65 251.9 362 43.6
Gohir.A08G019600 Gossypium hirsutum HOM05D006489 ORTHO05D007556 3.7e-64 249.6 359 44.0
Peaxi162Scf00964g00023 Petunia axillaris HOM05D006489 ORTHO05D007556 1.4e-63 247.7 360 41.4
TWI15G0832 Tripterygium wilfordii HOM05D006489 ORTHO05D007556 3.2e-63 246.5 353 43.1
Oeu062694.1 Olea europaea HOM05D006489 ORTHO05D007556 5.4e-63 245.7 347 44.1
CiPaw.12G129400 Carya illinoinensis HOM05D006489 ORTHO05D007556 1.2e-62 244.6 415 37.6
Cc09_g09720 Coffea canephora HOM05D006489 ORTHO05D007556 3.5e-62 243.0 365 41.1
QL08p010454 Quercus lobata HOM05D006489 ORTHO05D007556 4.6e-62 242.7 402 41.3
Solyc07g064570.3 Solanum lycopersicum HOM05D006489 ORTHO05D007556 1.0e-61 241.5 356 43.5
Cpa.g.sc97.9 Carica papaya HOM05D006489 ORTHO05D007556 3.0e-61 240.0 372 42.5
PGSC0003DMG400022321 Solanum tuberosum HOM05D006489 ORTHO05D007556 5.0e-61 239.2 355 41.7
Sopen07g032750 Solanum pennellii HOM05D006489 ORTHO05D007556 3.3e-60 236.5 362 42.8
Sabra11G0125100 Salix brachista HOM05D006489 ORTHO05D007556 4.3e-60 236.1 372 43.8
ATR0752G219 Amborella trichopoda HOM05D006489 ORTHO05D007556 1.6e-59 234.2 375 40.8
Aqoxy1G03602 Aquilegia oxysepala HOM05D006489 ORTHO05D007556 3.6e-59 233.0 387 39.5
MBI02_g07154_MAGBIO Magnolia biondii HOM05D006489 ORTHO05D007556 1.4e-58 231.1 396 38.1
Cfa020351 Carpinus fangiana HOM05D006489 ORTHO05D007556 8.9e-58 228.4 444 35.8
MBI18_g45561_MAGBIO Magnolia biondii HOM05D006489 ORTHO05D007556 2.0e-57 227.3 378 38.6
DCAR_022559 Daucus carota HOM05D006489 ORTHO05D007556 9.8e-57 224.9 370 39.7
GSVIVG01037644001 Vitis vinifera HOM05D006489 ORTHO05D007556 1.3e-56 224.6 364 39.3
Atru.chr2.3342 Acer truncatum HOM05D006489 ORTHO05D007556 2.2e-56 223.8 312 45.8
AUR62020449 Chenopodium quinoa HOM05D006489 ORTHO05D007556 2.9e-56 223.4 401 38.7
AT3G20490 Arabidopsis thaliana HOM05D006489 ORTHO05D007556 2.4e-55 220.3 361 41.0
LjContig00272g0011286 Lotus japonicus HOM05D006489 ORTHO05D007556 1.2e-54 218.0 408 37.5
Sed0018772 Sechium edule HOM05D006489 ORTHO05D007556 1.2e-54 218.0 409 36.2
Manes.03G129000 Manihot esculenta HOM05D006489 ORTHO05D007556 2.1e-54 217.2 366 40.4
Hma1.2p1_1162F.1_g262600 Hydrangea macrophylla HOM05D006489 ORTHO05D007556 3.5e-54 216.5 293 46.1
Eucgr.F00766 Eucalyptus grandis HOM05D006489 ORTHO05D007556 4.6e-54 216.1 349 39.0
AL3G34270 Arabidopsis lyrata HOM05D006489 ORTHO05D007556 5.1e-53 212.6 357 40.1
Nitab4.5_0011175g0010 Nicotiana tabacum HOM05D006489 ORTHO05D007556 7.3e-52 208.8 318 40.3
PGR083G1541 Punica granatum HOM05D006489 ORTHO05D007556 1.2e-51 208.0 358 41.9
Carub.0003s2045 Capsella rubella HOM05D006489 ORTHO05D007556 3.6e-51 206.5 342 39.5
ECA240G0124 Erigeron canadensis HOM05D006489 ORTHO05D007556 3.6e-51 206.5 369 38.8
Lsat_1_v5_gn_9_94040 Lactuca sativa HOM05D006489 ORTHO05D007556 4.7e-51 206.1 359 38.4
MELO3C013233.2 Cucumis melo HOM05D006489 ORTHO05D007556 8.1e-51 205.3 409 36.9
Lalb_Chr17g0348451 Lupinus albus HOM05D006489 ORTHO05D007556 8.1e-51 205.3 389 37.8
Nitab4.5_0001913g0140 Nicotiana tabacum HOM05D006489 ORTHO05D007556 8.1e-51 205.3 318 40.9
TPR.G1166 Trifolium pratense HOM05D006489 ORTHO05D007556 1.1e-50 204.9 401 35.7
Ca_06317_v3 Cicer arietinum L. HOM05D006489 ORTHO05D007556 1.4e-50 204.5 412 37.4
Lj1A872T56 Lonicera japonica HOM05D006489 ORTHO05D007556 1.4e-50 204.5 312 42.6
Sed0021471 Sechium edule HOM05D006489 ORTHO05D007556 1.8e-50 204.1 411 34.8
Glyma.02G290600 Glycine max HOM05D006489 ORTHO05D007556 5.2e-50 202.6 447 36.7
Nn1g03547 Nelumbo nucifera HOM05D006489 ORTHO05D007556 6.8e-50 202.2 362 38.1
SGA_v2.0_scaffold80G25948 Striga asiatica HOM05D006489 ORTHO05D007556 6.8e-50 202.2 359 38.7
HanXRQChr08g0220561 Helianthus annuus HOM05D006489 ORTHO05D007556 1.5e-49 201.1 375 39.2
Migut.M01768 Erythranthe guttata HOM05D006489 ORTHO05D007556 2.0e-49 200.7 355 38.6
PSO675G7358 Papaver somniferum HOM05D006489 ORTHO05D007556 2.6e-49 200.3 329 40.1
Aa31LG8G7280 Aethionema arabicum HOM05D006489 ORTHO05D007556 3.4e-49 199.9 359 37.3
HPP92_013323 Vanilla planifolia HOM05D006489 ORTHO05D007556 1.7e-48 197.6 395 36.2
VMungo0647G1504 Vigna mungo HOM05D006489 ORTHO05D007556 2.2e-48 197.2 451 33.7
CARHR096250 Cardamine hirsuta HOM05D006489 ORTHO05D007556 3.7e-48 196.4 364 38.7
ClCG05G014300 Citrullus lanatus HOM05D006489 ORTHO05D007556 4.9e-48 196.1 389 34.7
Prupe.4G212300 Prunus persica HOM05D006489 ORTHO05D007556 4.9e-48 196.1 401 33.7
Atru.BG.151.p Acer truncatum HOM05D006489 ORTHO05D007556 6.4e-48 195.7 359 37.0
THA.LOC104817868 Tarenaya hassleriana HOM05D006489 ORTHO05D007556 1.1e-47 194.9 341 36.1
HanXRQChr03g0076541 Helianthus annuus HOM05D006489 ORTHO05D007556 1.4e-47 194.5 365 38.1
Medtr5g092580 Medicago truncatula HOM05D006489 ORTHO05D007556 1.6e-46 191.0 382 36.1
arahy.Tifrunner.gnm1.ann1.I0Q6ZZ Arachis hypogaea HOM05D006489 ORTHO05D007556 7.8e-46 188.7 447 32.7
Ca_25386_v3 Cicer arietinum L. HOM05D006489 ORTHO05D007556 1.7e-45 187.6 403 33.7
Phvul.008G267300 Phaseolus vulgaris HOM05D006489 ORTHO05D007556 2.3e-45 187.2 452 33.4
arahy.Tifrunner.gnm1.ann1.X6VDEX Arachis hypogaea HOM05D006489 ORTHO05D007556 6.6e-45 185.7 447 32.7
FAN25G3282 Fragaria x ananassa HOM05D006489 ORTHO05D007556 2.5e-44 183.7 407 34.4
CDE02G1695 Ceratophyllum demersum HOM05D006489 ORTHO05D007556 4.3e-44 183.0 401 35.4
BraA04t16706Z Brassica rapa HOM05D006489 ORTHO05D007556 4.7e-43 179.5 362 37.0
Lalb_Chr10g0106941 Lupinus albus HOM05D006489 ORTHO05D007556 4.0e-42 176.4 375 33.3
Psat2g011040 Pisum sativum HOM05D006489 ORTHO05D007556 4.0e-42 176.4 410 34.4
BcaB06g27045 Brassica carinata HOM05D006489 ORTHO05D007556 1.2e-41 174.9 398 33.4
CDE05G3553 Ceratophyllum demersum HOM05D006489 ORTHO05D007556 1.3e-40 171.4 399 34.3
PSO541G0970 Papaver somniferum HOM05D006489 ORTHO05D007556 1.9e-39 167.5 326 35.9
MD03G1201600 Malus domestica HOM05D006489 ORTHO05D007556 7.1e-39 165.6 412 32.3
Glyma.14G024100 Glycine max HOM05D006489 ORTHO05D007556 1.6e-38 164.5 422 31.8
CsaV3_7G021220 Cucumis sativus L. HOM05D006489 ORTHO05D007556 6.0e-38 162.5 368 33.7
CANSAT11G2482 Cannabis sativa HOM05D006489 ORTHO05D007556 7.8e-38 162.2 435 30.3
RcHm_v2.0_Chr5g0039401 Rosa chinensis HOM05D006489 ORTHO05D007556 3.0e-37 160.2 351 33.6
A04p10340 Brassica napus HOM05D006489 ORTHO05D007556 5.1e-37 159.5 234 41.5
Medtr6g033325 Medicago truncatula HOM05D006489 ORTHO05D007556 8.7e-37 158.7 321 37.7
TPR.G36685 Trifolium pratense HOM05D006489 ORTHO05D007556 3.3e-36 156.8 441 31.3
C04p43850 Brassica napus HOM05D006489 ORTHO05D007556 4.3e-36 156.4 399 32.3
BcaC02g09533 Brassica carinata HOM05D006489 ORTHO05D007556 1.4e-34 151.4 400 32.0
BolC4t25966H Brassica oleracea HOM05D006489 ORTHO05D007556 1.4e-34 151.4 400 32.0
FAN21G0022 Fragaria x ananassa HOM05D006489 ORTHO05D007556 1.8e-34 151.0 292 36.6
Sp7g05570 Schrenkiella parvula HOM05D006489 ORTHO05D007556 1.2e-33 148.3 236 39.8
FvH4_3g22630 Fragaria vesca HOM05D006489 ORTHO05D007556 1.5e-33 147.9 292 36.6
Thecc.07G037900 Theobroma cacao HOM05D006489 ORTHO05D007556 6.4e-32 142.5 245 38.8
Lsat_1_v5_gn_7_108561 Lactuca sativa HOM05D006489 ORTHO05D007556 2.4e-31 140.6 215 39.5
Os04g0625100 Oryza sativa ssp. japonica HOM05D006489 ORTHO05D007556 3.2e-31 140.2 358 29.1
Zm00001eb431300 Zea mays HOM05D006489 ORTHO05D007556 3.9e-29 133.3 364 31.9
HanXRQChr11g0337701 Helianthus annuus HOM05D006489 ORTHO05D007556 3.3e-28 130.2 167 44.9
Thhalv10028177m.g Eutrema salsugineum HOM05D006489 ORTHO05D007556 5.6e-28 129.4 361 32.4
ECA236G1547 Erigeron canadensis HOM05D006489 ORTHO05D007556 2.1e-27 127.5 160 45.6
Psat1g097920 Pisum sativum HOM05D006489 ORTHO05D007556 3.1e-26 123.6 331 33.2
unitig_62.g23281 Utricularia gibba HOM05D008272 ORTHO05D010429 2.6e-25 120.6 311 31.2
SEGI_05401 Sequoiadendron giganteum HOM05D006489 ORTHO05D007556 2.4e-23 114.0 355 31.3
Actinidia10733 Actinidia chinensis HOM05D006489 ORTHO05D007556 7.4e-20 102.4 206 36.9
FAN16G1490 Fragaria x ananassa HOM05D006489 ORTHO05D007556 1.1e-18 98.6 160 40.6
Psat0s2568g0040 Pisum sativum HOM05D006489 ORTHO05D007556 5.1e-13 79.7 94 45.7
Lj8A169G92 Lonicera japonica HOM05D006489 ORTHO05D007556 3.3e-12 77.0 106 38.7
AUR62041984 Chenopodium quinoa HOM05D006489 ORTHO05D007556 1.6e-11 74.7 75 52.0
Mapoly0045s0076 Marchantia polymorpha HOM05D006489 ORTHO05D007556 9.0e-10 68.9 177 32.2
AagrBONN_evm.TU.Sc2ySwM_228.1621 Anthoceros agrestis HOM05D006489 ORTHO05D007556 7.9e-06 55.8 157 30.6


User provided reference genes

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