Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sc03g0007590 Simmondsia chinensis HOM05D008092 ORTHO05D010277 2.7e-138 495.4 252 100.0
Dinv33463 Davidia involucrata HOM05D008092 ORTHO05D010277 1.2e-37 161.0 253 40.7
Atru.chr6.2355 Acer truncatum HOM05D008092 ORTHO05D010277 2.0e-37 160.2 255 41.6
TWI36G1451 Tripterygium wilfordii HOM05D008092 ORTHO05D010277 2.0e-37 160.2 190 46.3
QL02p075225 Quercus lobata HOM05D008092 ORTHO05D010277 7.7e-37 158.3 239 40.6
QL93p1842_0091 Quercus lobata HOM05D008092 ORTHO05D010277 2.3e-36 156.8 239 40.6
TAR374G1215 Trochodendron aralioides HOM05D008092 ORTHO05D010277 5.0e-36 155.6 244 40.2
Actinidia06006 Actinidia chinensis HOM05D008092 ORTHO05D010277 8.6e-36 154.8 246 38.2
Cfa007393 Carpinus fangiana HOM05D008092 ORTHO05D010277 8.6e-36 154.8 187 46.5
GSVIVG01032429001 Vitis vinifera HOM05D008092 ORTHO05D010277 1.5e-35 154.1 242 40.5
Thecc.04G015000 Theobroma cacao HOM05D008092 ORTHO05D010277 1.2e-34 151.0 216 39.4
Gorai.011G095100 Gossypium raimondii HOM05D008092 ORTHO05D010277 2.8e-34 149.8 219 39.3
Gohir.D10G086900 Gossypium hirsutum HOM05D008092 ORTHO05D010277 1.8e-33 147.1 219 38.8
CSS0000484 Camellia sinensis var. sinensis HOM05D008092 ORTHO05D010277 4.0e-33 146.0 263 38.0
MD17G1030500 Malus domestica HOM05D008092 ORTHO05D010277 5.2e-33 145.6 240 38.3
CiPaw.03G041800 Carya illinoinensis HOM05D008092 ORTHO05D010277 1.5e-32 144.1 254 38.6
CSS0015151 Camellia sinensis var. sinensis HOM05D008092 ORTHO05D010277 2.6e-32 143.3 263 37.6
Duzib187G1326 Durio zibethinus HOM05D008092 ORTHO05D010277 2.6e-32 143.3 222 39.2
arahy.Tifrunner.gnm1.ann1.KZ8L38 Arachis hypogaea HOM05D008092 ORTHO05D010277 5.7e-32 142.1 176 47.2
arahy.Tifrunner.gnm1.ann1.M07V8F Arachis hypogaea HOM05D008092 ORTHO05D010277 1.7e-31 140.6 176 46.6
COL.COLO4_29084 Corchorus olitorius HOM05D008092 ORTHO05D010277 2.8e-31 139.8 176 43.2
Gohir.A10G102700 Gossypium hirsutum HOM05D008092 ORTHO05D010277 2.8e-31 139.8 219 38.4
Lj2g0022146 Lotus japonicus HOM05D008092 ORTHO05D010277 8.3e-31 138.3 177 45.8
CiPaw.04G027500 Carya illinoinensis HOM05D008092 ORTHO05D010277 1.1e-30 137.9 170 44.7
Prupe.3G289300 Prunus persica HOM05D008092 ORTHO05D010277 1.1e-30 137.9 226 37.6
CiPaw.02G035400 Carya illinoinensis HOM05D008092 ORTHO05D010277 1.8e-30 137.1 238 38.7
Glyma.05G005000 Glycine max HOM05D008092 ORTHO05D010277 2.4e-30 136.7 241 37.8
Manes.17G115000 Manihot esculenta HOM05D008092 ORTHO05D010277 1.6e-29 134.0 257 38.1
vmacro05852 Vaccinium macrocarpon HOM05D008092 ORTHO05D010277 1.6e-29 134.0 217 36.9
CANSAT64G0606 Cannabis sativa HOM05D008092 ORTHO05D010277 2.7e-29 133.3 231 33.3
Lalb_Chr02g0156941 Lupinus albus HOM05D008092 ORTHO05D010277 3.5e-29 132.9 214 37.9
PGR083G2137 Punica granatum HOM05D008092 ORTHO05D010277 5.9e-29 132.1 236 39.4
Phvul.004G010900 Phaseolus vulgaris HOM05D008092 ORTHO05D010277 1.0e-28 131.3 175 42.9
Cc00_g25440 Coffea canephora HOM05D008092 ORTHO05D010277 1.2e-26 124.4 199 37.7
Nitab4.5_0000118g0190 Nicotiana tabacum HOM05D008092 ORTHO05D010277 2.8e-26 123.2 201 38.3
Rhsim10G0018500 Rhododendron simsii HOM05D008092 ORTHO05D010277 6.1e-26 122.1 280 34.3
TPR.G14075 Trifolium pratense HOM05D008092 ORTHO05D010277 8.0e-26 121.7 186 40.3
Glyma.19G005600 Glycine max HOM05D008092 ORTHO05D010277 6.8e-25 118.6 175 39.4
Psat1g056120 Pisum sativum HOM05D008092 ORTHO05D010277 3.4e-24 116.3 252 36.1
VMungo0464G1885 Vigna mungo HOM05D008092 ORTHO05D010277 7.5e-24 115.2 186 39.2
Lsat_1_v5_gn_4_183520 Lactuca sativa HOM05D008092 ORTHO05D010277 2.2e-23 113.6 236 33.5
CDE02G4384 Ceratophyllum demersum HOM05D008092 ORTHO05D010277 8.3e-23 111.7 176 35.8
CsaV3_3G042670 Cucumis sativus L. HOM05D008092 ORTHO05D010277 8.3e-23 111.7 205 34.1
MBI10_g33304_MAGBIO Magnolia biondii HOM05D008092 ORTHO05D010277 3.2e-22 109.8 189 34.4
HanXRQChr09g0255051 Helianthus annuus HOM05D008092 ORTHO05D010277 5.4e-22 109.0 161 37.9
DCAR_021714 Daucus carota HOM05D008092 ORTHO05D010277 2.7e-21 106.7 152 40.1
Medtr6g005430 Medicago truncatula HOM05D008092 ORTHO05D010277 2.7e-21 106.7 239 35.1
Cpa.g.sc108.51 Carica papaya HOM05D008092 ORTHO05D010277 1.3e-20 104.4 173 37.0
ECA232G1487 Erigeron canadensis HOM05D008092 ORTHO05D010277 1.9e-19 100.5 188 36.7
Eucgr.I01759 Eucalyptus grandis HOM05D008092 ORTHO05D010277 1.6e-18 97.4 116 43.1
MBI10_g44380_MAGBIO Magnolia biondii HOM05D008092 ORTHO05D010277 4.0e-17 92.8 189 31.2
PSO478G3237 Papaver somniferum HOM05D008092 ORTHO05D010277 6.8e-17 92.0 246 33.3
HPP92_003083 Vanilla planifolia HOM05D008092 ORTHO05D010277 2.2e-15 87.0 173 31.2
PSO017G5173 Papaver somniferum HOM05D008092 ORTHO05D010277 3.7e-15 86.3 246 32.1
Eucgr.I01763 Eucalyptus grandis HOM05D008092 ORTHO05D010277 1.9e-14 84.0 105 43.8
Oeu063467.1 Olea europaea HOM05D008092 ORTHO05D010277 9.2e-14 81.6 176 29.5
Haze_14721 Corylus avellana HOM05D008092 ORTHO05D010277 8.6e-12 75.1 119 39.5
Nitab4.5_0002306g0010 Nicotiana tabacum HOM05D008092 ORTHO05D010277 4.3e-11 72.8 133 34.6
Mapoly0035s0098 Marchantia polymorpha HOM05D008092 ORTHO05D010277 7.3e-11 72.0 176 25.6
TPR.G15211 Trifolium pratense HOM05D008092 ORTHO05D010277 9.5e-11 71.6 106 40.6
Haze_14716 Corylus avellana HOM05D008092 ORTHO05D010277 2.1e-10 70.5 121 38.0
Pp3c3_2330 Physcomitrium patens HOM05D008092 ORTHO05D010277 1.2e-08 64.7 115 36.5
MELO3C009977.2 Cucumis melo HOM05D008092 ORTHO05D010277 9.9e-08 61.6 184 29.3
Pp3c2_13540 Physcomitrium patens HOM05D008092 ORTHO05D010277 9.9e-08 61.6 263 28.9
Nn3g16773 Nelumbo nucifera HOM05D008092 ORTHO05D010277 5.4e-06 55.8 57 42.1


User provided reference genes

Program Settings