Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sc03g0007490 Simmondsia chinensis HOM05D004159 ORTHO05D388831 5.1e-55 217.6 120 100.0
Dinv33444 Davidia involucrata HOM05D004159 ORTHO05D005858 3.5e-11 72.0 102 45.1
Atru.chr6.2388 Acer truncatum HOM05D004159 ORTHO05D005858 1.0e-10 70.5 100 42.0
COL.COLO4_29105 Corchorus olitorius HOM05D004159 ORTHO05D005858 2.9e-10 68.9 104 46.2
Actinidia09406 Actinidia chinensis HOM05D004159 ORTHO05D005858 5.0e-10 68.2 109 45.0
Potri.004G121400 Populus trichocarpa HOM05D004159 ORTHO05D005858 1.5e-09 66.6 96 49.0
Sabra04G0067000 Salix brachista HOM05D004159 ORTHO05D005858 2.5e-09 65.9 96 49.0
MD17G1027600 Malus domestica HOM05D004159 ORTHO05D005858 7.2e-09 64.3 98 40.8
Duzib187G0134 Durio zibethinus HOM05D004159 ORTHO05D005858 1.2e-08 63.5 100 44.0
ClCG01G013750 Citrullus lanatus HOM05D004159 ORTHO05D005858 2.1e-08 62.8 102 42.2
LjContig00272g0012452 Lotus japonicus HOM05D004159 ORTHO05D005858 2.1e-08 62.8 97 41.2
MSTRG.20029 Avicennia marina HOM05D004159 ORTHO05D005858 2.8e-08 62.4 107 42.1
RcHm_v2.0_Chr5g0047391 Rosa chinensis HOM05D004159 ORTHO05D005858 4.7e-08 61.6 102 38.2
TWI56G0312 Tripterygium wilfordii HOM05D004159 ORTHO05D005858 4.7e-08 61.6 109 40.4
Duzib264G0191 Durio zibethinus HOM05D004159 ORTHO05D005858 6.1e-08 61.2 100 44.0
Eucgr.I01748 Eucalyptus grandis HOM05D004159 ORTHO05D005858 6.1e-08 61.2 93 40.9
Sed0001839 Sechium edule HOM05D004159 ORTHO05D005858 6.1e-08 61.2 100 40.0
Hund22314 Selenicereus undatus HOM05D004159 ORTHO05D005858 6.1e-08 61.2 102 41.2
CSS0048893 Camellia sinensis var. sinensis HOM05D004159 ORTHO05D005858 1.0e-07 60.5 102 44.1
Thecc.04G016700 Theobroma cacao HOM05D004159 ORTHO05D005858 1.0e-07 60.5 100 42.0
Lj1g0017236 Lotus japonicus HOM05D004159 ORTHO05D005858 1.4e-07 60.1 97 40.2
ClCG11G000220 Citrullus lanatus HOM05D004159 ORTHO05D005858 2.3e-07 59.3 99 38.4
MELO3C004873.2 Cucumis melo HOM05D004159 ORTHO05D005858 2.3e-07 59.3 105 41.0
PGR142G2553 Punica granatum HOM05D004159 ORTHO05D005858 2.3e-07 59.3 102 42.2
CDE07G0971 Ceratophyllum demersum HOM05D004159 ORTHO05D005858 4.0e-07 58.5 97 39.2
Ciclev10014699m.g Citrus clementina HOM05D004159 ORTHO05D005858 4.0e-07 58.5 103 40.8
QL02p074797 Quercus lobata HOM05D004159 ORTHO05D005858 4.0e-07 58.5 98 38.8
Cpa.g.sc108.65 Carica papaya HOM05D004159 ORTHO05D005858 6.8e-07 57.8 100 40.0
Gohir.A07G222900 Gossypium hirsutum HOM05D004159 ORTHO05D005858 6.8e-07 57.8 100 42.0
Gohir.D07G229600 Gossypium hirsutum HOM05D004159 ORTHO05D005858 6.8e-07 57.8 105 41.9
Gorai.001G264700 Gossypium raimondii HOM05D004159 ORTHO05D005858 6.8e-07 57.8 105 41.9
MBI16_g23841_MAGBIO Magnolia biondii HOM05D004159 ORTHO05D005858 6.8e-07 57.8 106 38.7
TAR629G3285 Trochodendron aralioides HOM05D004159 ORTHO05D005858 6.8e-07 57.8 94 40.4
GSVIVG01032412001 Vitis vinifera HOM05D004159 ORTHO05D005858 6.8e-07 57.8 103 40.8
CiPaw.03G043300 Carya illinoinensis HOM05D004159 ORTHO05D005858 1.2e-06 57.0 97 42.3
CDE06G0546 Ceratophyllum demersum HOM05D004159 ORTHO05D005858 1.2e-06 57.0 94 39.4
CANSAT64G2890 Cannabis sativa HOM05D004159 ORTHO05D005858 1.5e-06 56.6 91 44.0
BcaB01g05107 Brassica carinata HOM05D004159 ORTHO05D005858 2.0e-06 56.2 93 40.9
C03p07700 Brassica napus HOM05D004159 ORTHO05D005858 2.0e-06 56.2 93 40.9
BolC3t13270H Brassica oleracea HOM05D004159 ORTHO05D005858 2.0e-06 56.2 93 40.9
CsaV3_1G014060 Cucumis sativus L. HOM05D004159 ORTHO05D005858 2.0e-06 56.2 105 39.0
Thhalv10013046m.g Eutrema salsugineum HOM05D004159 ORTHO05D005858 2.0e-06 56.2 95 43.2
TAR371G0318 Trochodendron aralioides HOM05D004159 ORTHO05D005858 2.6e-06 55.8 94 38.3
BcaB01g05108 Brassica carinata HOM05D004159 ORTHO05D005858 3.4e-06 55.5 93 39.8
Sed0003581 Sechium edule HOM05D004159 ORTHO05D005858 4.4e-06 55.1 100 37.0
Nn3g16747 Nelumbo nucifera HOM05D004159 ORTHO05D005858 5.7e-06 54.7 95 40.0
vmacro05861 Vaccinium macrocarpon HOM05D004159 ORTHO05D005858 7.5e-06 54.3 113 43.4


User provided reference genes

Program Settings