Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sc03g0007370 Simmondsia chinensis HOM05D017028 ORTHO05D016971 7.7e-67 258.1 270 100.0
Sc03g0007390 Simmondsia chinensis HOM05D017028 ORTHO05D016971 9.2e-28 128.3 69 91.3
Sc03g0007400 Simmondsia chinensis HOM05D017028 ORTHO05D016971 1.6e-24 117.5 69 84.1
RcHm_v2.0_Chr2g0119041 Rosa chinensis HOM05D017028 ORTHO05D016971 8.1e-16 88.6 63 61.9
Haze_18778 Corylus avellana HOM05D017028 ORTHO05D016971 4.0e-15 86.3 92 45.7
Haze_27707 Corylus avellana HOM05D017028 ORTHO05D016971 4.0e-15 86.3 92 45.7
CSS0031229 Camellia sinensis var. sinensis HOM05D000029 ORTHO05D000854 2.1e-11 73.9 79 46.8
Migut.F01644 Erythranthe guttata HOM05D000053 ORTHO05D000035 2.6e-06 57.0 63 39.7
HPP92_018709 Vanilla planifolia HOM05D022201 ORTHO05D018904 2.6e-06 57.0 51 43.1
HPP92_018790 Vanilla planifolia HOM05D000029 ORTHO05D002500 2.6e-06 57.0 51 43.1
PGSC0003DMG400017337 Solanum tuberosum HOM05D000071 ORTHO05D000029 3.4e-06 56.6 58 51.7
COL.COLO4_20701 Corchorus olitorius HOM05D000071 ORTHO05D000029 4.4e-06 56.2 59 49.2
Lsat_1_v5_gn_4_26261 Lactuca sativa HOM05D000094 ORTHO05D000455 4.4e-06 56.2 52 48.1
Cpa.g.sc130.2 Carica papaya HOM05D000940 ORTHO05D000782 9.9e-06 55.1 64 39.1


User provided reference genes

Program Settings