Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sc03g0007350 Simmondsia chinensis HOM05D007622 ORTHO05D009409 3.8e-57 224.6 108 100.0
Ah.03g137040 Amaranthus hybridus HOM05D007622 ORTHO05D009409 4.3e-45 184.5 109 81.7
Hund12976 Selenicereus undatus HOM05D007622 ORTHO05D009409 1.6e-44 182.6 110 76.4
GSVIVG01032401001 Vitis vinifera HOM05D007622 ORTHO05D009409 1.4e-43 179.5 95 87.4
Nn4g22626 Nelumbo nucifera HOM05D007622 ORTHO05D009409 1.8e-43 179.1 108 77.8
HanXRQChr09g0255201 Helianthus annuus HOM05D007622 ORTHO05D009409 3.1e-43 178.3 106 79.2
Dinv35108 Davidia involucrata HOM05D007622 ORTHO05D009409 1.5e-42 176.0 96 85.4
MSTRG.15530 Avicennia marina HOM05D007622 ORTHO05D009409 5.8e-42 174.1 108 75.0
EL10Ac6g14084 Beta vulgaris HOM05D007622 ORTHO05D009409 5.8e-42 174.1 95 81.1
Oeu013968.1 Olea europaea HOM05D007622 ORTHO05D009409 7.6e-42 173.7 108 74.1
Lsat_1_v5_gn_4_184040 Lactuca sativa HOM05D007622 ORTHO05D009409 1.0e-41 173.3 96 85.4
Potri.017G071300 Populus trichocarpa HOM05D007622 ORTHO05D009409 1.0e-41 173.3 95 83.2
PGR083G1671 Punica granatum HOM05D007622 ORTHO05D009409 1.0e-41 173.3 98 82.7
Potri.001G344700 Populus trichocarpa HOM05D007622 ORTHO05D009409 1.3e-41 172.9 95 85.3
Sabra16G0223800 Salix brachista HOM05D007622 ORTHO05D009409 1.3e-41 172.9 95 84.2
CANSAT64G0926 Cannabis sativa HOM05D007622 ORTHO05D009409 2.2e-41 172.2 95 84.2
Eucgr.J02247 Eucalyptus grandis HOM05D007622 ORTHO05D009409 2.2e-41 172.2 109 78.0
QL02p074426 Quercus lobata HOM05D007622 ORTHO05D009409 2.2e-41 172.2 95 84.2
Cc07_g01640 Coffea canephora HOM05D007622 ORTHO05D009409 3.8e-41 171.4 98 80.6
COL.COLO4_29125 Corchorus olitorius HOM05D000285 ORTHO05D009409 4.9e-41 171.0 100 83.0
Prupe.3G292200 Prunus persica HOM05D007622 ORTHO05D009409 6.5e-41 170.6 96 83.3
TWI36G0684 Tripterygium wilfordii HOM05D007622 ORTHO05D009409 8.4e-41 170.2 96 81.2
CiPaw.04G028800 Carya illinoinensis HOM05D007622 ORTHO05D009409 1.4e-40 169.5 96 81.2
Duzib147G0488 Durio zibethinus HOM05D007622 ORTHO05D009409 1.4e-40 169.5 97 81.4
SalBow1G5210 Salvia bowleyana HOM05D007622 ORTHO05D009409 1.9e-40 169.1 96 81.2
SGA_v2.0_scaffold195G40817 Striga asiatica HOM05D007622 ORTHO05D009409 1.9e-40 169.1 106 77.4
Ciclev10017228m.g Citrus clementina HOM05D007622 ORTHO05D009409 2.5e-40 168.7 99 79.8
FvH4_6g51480 Fragaria vesca HOM05D007622 ORTHO05D009409 2.5e-40 168.7 96 83.3
FAN02G2753 Fragaria x ananassa HOM05D007622 ORTHO05D009409 2.5e-40 168.7 96 83.3
FAN09G4241 Fragaria x ananassa HOM05D007622 ORTHO05D009409 2.5e-40 168.7 96 83.3
FAN14G0072 Fragaria x ananassa HOM05D007622 ORTHO05D009409 2.5e-40 168.7 96 83.3
RcHm_v2.0_Chr2g0173121 Rosa chinensis HOM05D007622 ORTHO05D009409 4.2e-40 167.9 96 81.2
ECA232G2324 Erigeron canadensis HOM05D007622 ORTHO05D009409 5.5e-40 167.5 98 81.6
Nitab4.5_0003318g0060 Nicotiana tabacum HOM05D007622 ORTHO05D009409 5.5e-40 167.5 97 80.4
Aqoxy5G03768 Aquilegia oxysepala HOM05D007622 ORTHO05D009409 7.1e-40 167.2 97 79.4
CDE09G0341 Ceratophyllum demersum HOM05D007622 ORTHO05D009409 7.1e-40 167.2 101 73.3
DCAR_001440 Daucus carota HOM05D007622 ORTHO05D009409 7.1e-40 167.2 98 81.6
MD17G1026500 Malus domestica HOM05D007622 ORTHO05D009409 7.1e-40 167.2 96 81.2
TAR629G2574 Trochodendron aralioides HOM05D007622 ORTHO05D009409 9.3e-40 166.8 95 82.1
CSS0000151 Camellia sinensis var. sinensis HOM05D007622 ORTHO05D009409 1.2e-39 166.4 115 70.4
CSS0044104 Camellia sinensis var. sinensis HOM05D007622 ORTHO05D009409 1.2e-39 166.4 115 70.4
FAN05G3531 Fragaria x ananassa HOM05D007622 ORTHO05D009409 1.6e-39 166.0 96 82.3
Nitab4.5_0001860g0100 Nicotiana tabacum HOM05D007622 ORTHO05D009409 1.6e-39 166.0 96 80.2
Peaxi162Scf00129g01661 Petunia axillaris HOM05D007622 ORTHO05D009409 1.6e-39 166.0 97 79.4
arahy.Tifrunner.gnm1.ann1.QKG8XN Arachis hypogaea HOM05D007622 ORTHO05D009409 2.1e-39 165.6 99 78.8
CAN.G473.12 Capsicum annuum HOM05D007622 ORTHO05D009409 2.1e-39 165.6 97 81.4
CDE02G3805 Ceratophyllum demersum HOM05D007622 ORTHO05D009409 2.1e-39 165.6 108 68.5
Solyc02g093350.3 Solanum lycopersicum HOM05D007622 ORTHO05D009409 2.1e-39 165.6 97 79.4
PGSC0003DMG400012602 Solanum tuberosum HOM05D007622 ORTHO05D009409 2.1e-39 165.6 97 79.4
ClCG09G019280 Citrullus lanatus HOM05D007622 ORTHO05D009409 2.7e-39 165.2 96 81.2
MELO3C021583.2 Cucumis melo HOM05D007622 ORTHO05D009409 2.7e-39 165.2 96 81.2
CsaV3_5G027110 Cucumis sativus L. HOM05D007622 ORTHO05D009409 2.7e-39 165.2 96 81.2
Gohir.D07G230100 Gossypium hirsutum HOM05D007622 ORTHO05D009409 2.7e-39 165.2 97 79.4
Gorai.001G265400 Gossypium raimondii HOM05D007622 ORTHO05D009409 2.7e-39 165.2 97 79.4
Actinidia16945 Actinidia chinensis HOM05D007622 ORTHO05D009409 3.5e-39 164.9 96 80.2
Gohir.A07G223400 Gossypium hirsutum HOM05D007622 ORTHO05D009409 3.5e-39 164.9 97 78.4
Sopen02g037920 Solanum pennellii HOM05D007622 ORTHO05D009409 3.5e-39 164.9 97 79.4
Atru.chr6.2402 Acer truncatum HOM05D007622 ORTHO05D009409 1.0e-38 163.3 109 77.1
Sed0017852 Sechium edule HOM05D007622 ORTHO05D009409 1.8e-38 162.5 96 79.2
THA.LOC104805368 Tarenaya hassleriana HOM05D007622 ORTHO05D009409 1.8e-38 162.5 112 73.2
Manes.15G151000 Manihot esculenta HOM05D007622 ORTHO05D009409 5.1e-38 161.0 97 79.4
Glyma.19G060600 Glycine max HOM05D007622 ORTHO05D009409 6.7e-38 160.6 94 79.8
Lalb_Chr24g0402871 Lupinus albus HOM05D007622 ORTHO05D009409 6.7e-38 160.6 94 77.7
PSO111G0004 Papaver somniferum HOM05D007622 ORTHO05D009409 6.7e-38 160.6 111 68.5
Phvul.008G153900 Phaseolus vulgaris HOM05D007622 ORTHO05D009409 1.1e-37 159.8 94 78.7
Sp7g01380 Schrenkiella parvula HOM05D007622 ORTHO05D009409 1.1e-37 159.8 97 77.3
Thhalv10027995m.g Eutrema salsugineum HOM05D007622 ORTHO05D009409 1.5e-37 159.5 97 77.3
AT5G40500 Arabidopsis thaliana HOM05D007622 ORTHO05D009409 1.9e-37 159.1 97 76.3
Zm00001eb425130 Zea mays HOM05D007622 ORTHO05D009409 1.9e-37 159.1 119 67.2
Glyma.16G070800 Glycine max HOM05D007622 ORTHO05D009409 2.5e-37 158.7 94 78.7
Thecc.04G017800 Theobroma cacao HOM05D007622 ORTHO05D009409 3.3e-37 158.3 98 78.6
BcaB06g27524 Brassica carinata HOM05D007622 ORTHO05D009409 1.3e-36 156.4 97 76.3
A04p13550 Brassica napus HOM05D000285 ORTHO05D009409 1.3e-36 156.4 97 76.3
C04p47330 Brassica napus HOM05D000285 ORTHO05D009409 1.3e-36 156.4 97 76.3
BolC4t26334H Brassica oleracea HOM05D000285 ORTHO05D009409 1.3e-36 156.4 97 76.3
BraA04t17014Z Brassica rapa HOM05D000285 ORTHO05D009409 1.3e-36 156.4 97 76.3
Migut.H00074 Erythranthe guttata HOM05D007622 ORTHO05D009409 1.6e-36 156.0 95 75.8
AL7G49320 Arabidopsis lyrata HOM05D007622 ORTHO05D009409 2.8e-36 155.2 97 75.3
Carub.0007s3502 Capsella rubella HOM05D007622 ORTHO05D009409 1.1e-35 153.3 98 73.5
Duzib264G0071 Durio zibethinus HOM05D007622 ORTHO05D009409 1.4e-35 152.9 98 75.5
Os04g0482900 Oryza sativa ssp. japonica HOM05D007622 ORTHO05D009409 3.1e-35 151.8 123 61.0
Medtr7g033680 Medicago truncatula HOM05D007622 ORTHO05D009409 5.3e-35 151.0 96 75.0
PSO067G0063 Papaver somniferum HOM05D007622 ORTHO05D009409 1.2e-34 149.8 98 72.4
Lj1g0022477 Lotus japonicus HOM05D007622 ORTHO05D009409 1.5e-34 149.4 82 82.9
arahy.Tifrunner.gnm1.ann1.30MLP8 Arachis hypogaea HOM05D007622 ORTHO05D009409 7.6e-34 147.1 109 67.9
TPR.G1098 Trifolium pratense HOM05D007622 ORTHO05D009409 3.8e-33 144.8 81 82.7
SEGI_15693 Sequoiadendron giganteum HOM05D007622 ORTHO05D009409 1.0e-30 136.7 97 64.9
AagrBONN_evm.TU.Sc2ySwM_117.2472 Anthoceros agrestis HOM05D007622 ORTHO05D009409 1.3e-28 129.8 94 58.5
Aa31LG9G1100 Aethionema arabicum HOM05D001812 ORTHO05D001874 6.9e-27 124.0 75 80.0
Pp3c12_19400 Physcomitrium patens HOM05D007622 ORTHO05D009409 5.9e-26 120.9 102 53.9
Rhsim08G0048800 Rhododendron simsii HOM05D007622 ORTHO05D009409 7.7e-26 120.6 93 65.6
TAR371G1070 Trochodendron aralioides HOM05D007622 ORTHO05D009409 1.0e-25 120.2 91 60.4
vmacro18290 Vaccinium macrocarpon HOM05D007622 ORTHO05D009409 2.9e-25 118.6 80 72.5
SMO367G1081 Selaginella moellendorffii HOM05D007622 ORTHO05D009409 3.2e-24 115.2 93 50.5
CBR_g34193 Chara braunii HOM05D007622 ORTHO05D009409 6.7e-22 107.5 94 51.1
Psat3g166480 Pisum sativum HOM05D007622 ORTHO05D009409 6.7e-22 107.5 64 78.1
MD09G1025400 Malus domestica HOM05D007622 ORTHO05D009409 5.7e-21 104.4 60 80.0
Cre12.g498700 Chlamydomonas reinhardtii HOM05D007622 ORTHO05D009409 2.7e-15 85.5 77 46.8
PRCOL_00004665 Prasinoderma coloniale HOM05D007622 ORTHO05D009409 3.7e-12 75.1 80 37.5
vmacro18289 Vaccinium macrocarpon HOM05D007622 ORTHO05D009409 4.2e-08 61.6 44 65.9


User provided reference genes

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