Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sc03g0007130 Simmondsia chinensis HOM05D004896 ORTHO05D006447 1.8e-154 549.3 294 100.0
Manes.15G155100 Manihot esculenta HOM05D004896 ORTHO05D006447 5.0e-112 408.3 299 69.9
Ah.12g059440 Amaranthus hybridus HOM05D004896 ORTHO05D006447 1.2e-110 403.7 292 71.9
EL10Ac9g21007 Beta vulgaris HOM05D004896 ORTHO05D006447 6.1e-110 401.4 292 72.6
EL10Ac5g10496 Beta vulgaris HOM05D004896 ORTHO05D006447 4.0e-109 398.7 292 72.6
PGR142G1575 Punica granatum HOM05D004896 ORTHO05D006447 6.8e-109 397.9 299 70.2
GSVIVG01003974001 Vitis vinifera HOM05D004896 ORTHO05D006447 6.8e-109 397.9 294 70.1
Hund14985 Selenicereus undatus HOM05D004896 ORTHO05D006447 8.8e-109 397.5 294 71.1
QL02p073334 Quercus lobata HOM05D004896 ORTHO05D006447 2.2e-107 392.9 305 68.5
Sed0025595 Sechium edule HOM05D004896 ORTHO05D006447 8.3e-107 391.0 294 67.7
Haze_14796 Corylus avellana HOM05D004896 ORTHO05D006447 2.4e-106 389.4 294 69.0
ClCG05G013000 Citrullus lanatus HOM05D004896 ORTHO05D006447 4.1e-106 388.7 300 66.7
Ciclev10015882m.g Citrus clementina HOM05D004896 ORTHO05D006447 4.1e-106 388.7 299 67.9
Actinidia18427 Actinidia chinensis HOM05D004896 ORTHO05D006447 5.4e-106 388.3 310 66.1
Cpa.g.sc130.54 Carica papaya HOM05D004896 ORTHO05D006447 5.4e-106 388.3 295 68.8
Cfa007299 Carpinus fangiana HOM05D004896 ORTHO05D006447 1.6e-105 386.7 294 68.7
Ca_03861_v3 Cicer arietinum L. HOM05D004896 ORTHO05D006447 2.0e-105 386.3 292 70.2
MELO3C014823.2 Cucumis melo HOM05D004896 ORTHO05D006447 3.5e-105 385.6 298 66.1
CsaV3_3G027540 Cucumis sativus L. HOM05D004896 ORTHO05D006447 5.9e-105 384.8 296 66.9
Psat3g168560 Pisum sativum HOM05D004896 ORTHO05D006447 1.0e-104 384.0 292 68.2
Hma1.2p1_1484F.1_g286400 Hydrangea macrophylla HOM05D004896 ORTHO05D006447 2.3e-104 382.9 302 65.2
Nn5g27187 Nelumbo nucifera HOM05D004896 ORTHO05D006447 2.9e-104 382.5 242 79.3
Medtr0018s0290 Medicago truncatula HOM05D004896 ORTHO05D006447 3.8e-104 382.1 292 68.8
Eucgr.I01701 Eucalyptus grandis HOM05D004896 ORTHO05D006447 5.0e-104 381.7 240 78.3
FAN14G4168 Fragaria x ananassa HOM05D004896 ORTHO05D006447 8.6e-104 380.9 301 64.8
CSS0036459 Camellia sinensis var. sinensis HOM05D004896 ORTHO05D006447 1.1e-103 380.6 302 66.6
CANSAT64G0177 Cannabis sativa HOM05D004896 ORTHO05D006447 1.1e-103 380.6 301 64.8
TAR629G1306 Trochodendron aralioides HOM05D004896 ORTHO05D006447 1.1e-103 380.6 301 69.1
Ca_01399_v3 Cicer arietinum L. HOM05D004896 ORTHO05D006447 1.5e-103 380.2 292 70.5
Hma1.2p1_1407F.1_g281400 Hydrangea macrophylla HOM05D004896 ORTHO05D006447 1.5e-103 380.2 302 64.9
Lj7A604T65 Lonicera japonica HOM05D004896 ORTHO05D006447 1.5e-103 380.2 298 66.4
AUR62030697 Chenopodium quinoa HOM05D004896 ORTHO05D006447 2.5e-103 379.4 217 85.3
CSS0017957 Camellia sinensis var. sinensis HOM05D004896 ORTHO05D006447 3.3e-103 379.0 300 66.7
FAN09G1675 Fragaria x ananassa HOM05D004896 ORTHO05D006447 4.3e-103 378.6 299 64.9
AUR62036338 Chenopodium quinoa HOM05D004896 ORTHO05D006447 5.6e-103 378.3 217 85.3
MD09G1019000 Malus domestica HOM05D004896 ORTHO05D006447 5.6e-103 378.3 305 63.9
Dinv33394 Davidia involucrata HOM05D004896 ORTHO05D006447 7.3e-103 377.9 304 64.1
FAN05G4015 Fragaria x ananassa HOM05D004896 ORTHO05D006447 7.3e-103 377.9 301 64.1
FvH4_6g52290 Fragaria vesca HOM05D004896 ORTHO05D006447 9.5e-103 377.5 301 64.5
Gohir.A05G342400 Gossypium hirsutum HOM05D004896 ORTHO05D006447 1.2e-102 377.1 299 65.6
Gorai.012G091200 Gossypium raimondii HOM05D004896 ORTHO05D006447 1.2e-102 377.1 299 65.6
RcHm_v2.0_Chr2g0173821 Rosa chinensis HOM05D004896 ORTHO05D006447 1.2e-102 377.1 301 67.1
Aqoxy1G02023 Aquilegia oxysepala HOM05D004896 ORTHO05D006447 1.6e-102 376.7 238 78.2
SGA_v2.0_scaffold135G34930 Striga asiatica HOM05D004896 ORTHO05D006447 1.6e-102 376.7 301 64.8
Rhsim08G0046600 Rhododendron simsii HOM05D004896 ORTHO05D006447 2.1e-102 376.3 305 65.9
Gohir.D04G080440 Gossypium hirsutum HOM05D004896 ORTHO05D006447 2.8e-102 375.9 299 65.2
Prupe.3G298100 Prunus persica HOM05D004896 ORTHO05D006447 2.8e-102 375.9 304 65.8
Duzib264G0232 Durio zibethinus HOM05D004896 ORTHO05D006447 4.7e-102 375.2 301 66.1
Atru.chr6.2473 Acer truncatum HOM05D004896 ORTHO05D006447 6.1e-102 374.8 302 65.2
TWI56G0223 Tripterygium wilfordii HOM05D004896 ORTHO05D006447 8.0e-102 374.4 242 77.3
FAN02G3298 Fragaria x ananassa HOM05D004896 ORTHO05D006447 1.0e-101 374.0 300 64.3
Lj1g0027814 Lotus japonicus HOM05D004896 ORTHO05D006447 1.0e-101 374.0 292 68.2
Potri.001G338200 Populus trichocarpa HOM05D004896 ORTHO05D006447 1.0e-101 374.0 300 67.0
Hma1.2p1_0383F.1_g140290 Hydrangea macrophylla HOM05D004896 ORTHO05D006447 1.4e-101 373.6 288 66.3
arahy.Tifrunner.gnm1.ann1.10VWGS Arachis hypogaea HOM05D004896 ORTHO05D006447 1.8e-101 373.2 235 79.1
Glyma.16G066000 Glycine max HOM05D004896 ORTHO05D006447 1.8e-101 373.2 296 67.6
arahy.Tifrunner.gnm1.ann1.5ILH08 Arachis hypogaea HOM05D004896 ORTHO05D006447 2.3e-101 372.9 302 69.2
TPR.G1112 Trifolium pratense HOM05D004896 ORTHO05D006447 2.3e-101 372.9 290 68.3
CiPaw.04G032200 Carya illinoinensis HOM05D004896 ORTHO05D006447 4.0e-101 372.1 238 77.3
Migut.H00045 Erythranthe guttata HOM05D004896 ORTHO05D006447 6.8e-101 371.3 298 65.1
Thecc.04G026600 Theobroma cacao HOM05D004896 ORTHO05D006447 6.8e-101 371.3 303 64.7
COL.COLO4_29242 Corchorus olitorius HOM05D004896 ORTHO05D006447 1.2e-100 370.5 299 65.2
Phvul.008G145713 Phaseolus vulgaris HOM05D004896 ORTHO05D006447 1.5e-100 370.2 291 67.0
CAN.G473.48 Capsicum annuum HOM05D004896 ORTHO05D006447 4.4e-100 368.6 240 76.7
MBI19_g04325_MAGBIO Magnolia biondii HOM05D004896 ORTHO05D006447 4.4e-100 368.6 280 67.9
DCAR_021752 Daucus carota HOM05D004896 ORTHO05D006447 2.9e-99 365.9 296 64.9
Solyc02g093690.3 Solanum lycopersicum HOM05D004896 ORTHO05D006447 3.7e-99 365.5 239 75.7
Sopen02g038330 Solanum pennellii HOM05D004896 ORTHO05D006447 3.7e-99 365.5 239 75.7
MSTRG.3120 Avicennia marina HOM05D004896 ORTHO05D006447 8.3e-99 364.4 240 75.0
Cc07_g00300 Coffea canephora HOM05D004896 ORTHO05D006447 1.1e-98 364.0 219 80.8
Nitab4.5_0001031g0180 Nicotiana tabacum HOM05D004896 ORTHO05D006447 1.4e-98 363.6 302 66.9
PGSC0003DMG400012644 Solanum tuberosum HOM05D004896 ORTHO05D006447 1.4e-98 363.6 239 75.3
VMungo1080G0372 Vigna mungo HOM05D004896 ORTHO05D006447 1.8e-98 363.2 240 75.4
HanXRQChr17g0549471 Helianthus annuus HOM05D004896 ORTHO05D006447 2.4e-98 362.8 239 75.3
Lsat_1_v5_gn_0_30781 Lactuca sativa HOM05D004896 ORTHO05D006447 5.4e-98 361.7 237 75.5
ATR0099G063 Amborella trichopoda HOM05D004896 ORTHO05D006447 1.2e-97 360.5 239 74.1
CiPaw.03G049000 Carya illinoinensis HOM05D004896 ORTHO05D006447 2.0e-97 359.8 238 75.2
Nitab4.5_0002158g0160 Nicotiana tabacum HOM05D004896 ORTHO05D006447 5.9e-97 358.2 302 63.6
ECA246G3787 Erigeron canadensis HOM05D004896 ORTHO05D006447 3.0e-96 355.9 240 72.1
Lalb_Chr14g0362991 Lupinus albus HOM05D004896 ORTHO05D006447 8.6e-96 354.4 239 73.6
PSO675G8471 Papaver somniferum HOM05D004896 ORTHO05D006447 1.1e-95 354.0 238 72.7
THA.LOC104825307 Tarenaya hassleriana HOM05D004896 ORTHO05D006447 2.5e-95 352.8 291 63.9
BcaB06g27542 Brassica carinata HOM05D004896 ORTHO05D006447 4.3e-95 352.1 291 63.6
A04p13700 Brassica napus HOM05D004896 ORTHO05D006447 1.2e-94 350.5 290 62.8
C04p47490 Brassica napus HOM05D004896 ORTHO05D006447 1.2e-94 350.5 290 62.8
BolC4t26350H Brassica oleracea HOM05D004896 ORTHO05D006447 1.2e-94 350.5 290 62.8
BraA04t17030Z Brassica rapa HOM05D004896 ORTHO05D006447 1.2e-94 350.5 290 62.8
PSO541G0959 Papaver somniferum HOM05D004896 ORTHO05D006447 2.8e-94 349.4 238 71.8
Carub.0007s3482 Capsella rubella HOM05D004896 ORTHO05D006447 4.7e-94 348.6 291 62.5
vmacro18309 Vaccinium macrocarpon HOM05D004896 ORTHO05D006447 4.7e-94 348.6 217 77.9
FvH4_6g52310 Fragaria vesca HOM05D004896 ORTHO05D006447 1.8e-93 346.7 217 77.4
Os07g0644000 Oryza sativa ssp. japonica HOM05D004896 ORTHO05D006447 2.3e-93 346.3 225 74.2
CARHR261290 Cardamine hirsuta HOM05D004896 ORTHO05D006447 5.2e-93 345.1 290 62.1
Zm00001eb329190 Zea mays HOM05D004896 ORTHO05D006447 6.8e-93 344.7 238 71.0
unitig_0.g536 Utricularia gibba HOM05D004896 ORTHO05D006447 1.2e-92 344.0 239 71.1
HPP92_020467 Vanilla planifolia HOM05D004896 ORTHO05D006447 2.6e-92 342.8 243 68.7
AL7G49080 Arabidopsis lyrata HOM05D004896 ORTHO05D006447 4.4e-92 342.0 294 62.6
Thhalv10027828m.g Eutrema salsugineum HOM05D004896 ORTHO05D006447 1.3e-91 340.5 239 71.1
CDE07G0249 Ceratophyllum demersum HOM05D004896 ORTHO05D006447 4.9e-91 338.6 238 69.3
Sp7g01200 Schrenkiella parvula HOM05D004896 ORTHO05D006447 6.4e-91 338.2 293 64.2
Sabra16G0218900 Salix brachista HOM05D004896 ORTHO05D006447 1.1e-90 337.4 372 51.6
AT5G40660 Arabidopsis thaliana HOM05D004896 ORTHO05D006447 1.9e-90 336.7 291 60.5
Aa31LG9G960 Aethionema arabicum HOM05D004896 ORTHO05D006447 3.0e-88 329.3 295 63.1
HPP92_026167 Vanilla planifolia HOM05D004896 ORTHO05D006447 6.6e-88 328.2 217 71.9
SHI03827 Sapria himalayana HOM05D004896 ORTHO05D006447 1.5e-84 317.0 272 59.9
Atru.chr3.2666 Acer truncatum HOM05D004896 ORTHO05D006447 1.2e-81 307.4 233 68.2
RcHm_v2.0_Chr2g0174241 Rosa chinensis HOM05D004896 ORTHO05D006447 1.6e-81 307.0 240 66.2
FAN14G0298 Fragaria x ananassa HOM05D004896 ORTHO05D006447 1.8e-77 293.5 318 53.8
Peaxi162Scf00420g00251 Petunia axillaris HOM05D004896 ORTHO05D006447 4.4e-76 288.9 241 63.5
SEGI_10618 Sequoiadendron giganteum HOM05D004896 ORTHO05D006447 7.1e-74 281.6 240 58.8
Oeu064389.1 Olea europaea HOM05D004896 ORTHO05D006447 4.2e-66 255.8 240 57.1
Sed0012039 Sechium edule HOM05D004896 ORTHO05D006447 5.4e-66 255.4 284 55.3
Hma1.2p1_1484F.1_g286430 Hydrangea macrophylla HOM05D004896 ORTHO05D006447 6.9e-61 238.4 208 60.1
Actinidia16947 Actinidia chinensis HOM05D004896 ORTHO05D006447 4.2e-58 229.2 209 59.8
SGA_v2.0_scaffold18G08247 Striga asiatica HOM05D004896 ORTHO05D006447 6.0e-57 225.3 301 46.5
Atru.chr4.450 Acer truncatum HOM05D004896 ORTHO05D006447 5.1e-56 222.2 204 61.8
Nitab4.5_0002158g0260 Nicotiana tabacum HOM05D002474 ORTHO05D007142 4.8e-54 215.7 207 56.5
AUR62030692 Chenopodium quinoa HOM05D004896 ORTHO05D006447 7.9e-49 198.4 109 86.2
Pp3c2_19250 Physcomitrium patens HOM05D004896 ORTHO05D006447 8.7e-48 194.9 217 47.0
EL10Ac5g11826 Beta vulgaris HOM05D004896 ORTHO05D006447 1.6e-46 190.7 118 79.7
SMO200G0187 Selaginella moellendorffii HOM05D004896 ORTHO05D006447 2.8e-46 189.9 234 44.0
Mapoly0004s0068 Marchantia polymorpha HOM05D004896 ORTHO05D006447 2.2e-43 180.3 206 44.2
AagrBONN_evm.TU.Sc2ySwM_362.2811 Anthoceros agrestis HOM05D004896 ORTHO05D006447 3.8e-43 179.5 242 41.7
MD17G1019600 Malus domestica HOM05D004896 ORTHO05D006447 3.8e-43 179.5 185 54.6
CBR_g4059 Chara braunii HOM05D004896 ORTHO05D006447 4.5e-36 156.0 249 37.3
Cc06_g20980 Coffea canephora HOM05D004896 ORTHO05D006447 2.2e-35 153.7 144 59.0
Hma1.2p1_1484F.1_g286403 Hydrangea macrophylla HOM05D004896 ORTHO05D006447 2.9e-35 153.3 94 79.8
Hma1.2p1_1484F.1_g286440 Hydrangea macrophylla HOM05D004896 ORTHO05D006447 2.9e-35 153.3 94 79.8
Duzib147G0160 Durio zibethinus HOM05D004896 ORTHO05D006447 4.6e-33 146.0 92 77.2
Glyma.19G080702 Glycine max HOM05D004896 ORTHO05D006447 2.5e-31 140.2 93 74.2
PRCOL_00001693 Prasinoderma coloniale HOM05D004896 ORTHO05D006447 3.3e-31 139.8 227 35.7
MCO13G572 Micromonas commoda HOM05D004896 ORTHO05D006447 1.5e-28 131.0 216 37.0
Atru.chr11.190 Acer truncatum HOM05D004896 ORTHO05D006447 2.6e-28 130.2 87 73.6
Atru.chr7.121 Acer truncatum HOM05D005216 ORTHO05D006453 7.7e-28 128.6 87 73.6
CDE12G0511 Ceratophyllum demersum HOM05D004896 ORTHO05D006447 1.4e-26 124.4 86 72.1
Atru.chr2.3725 Acer truncatum HOM05D004896 ORTHO05D006447 1.7e-22 110.9 65 80.0
Atru.chr1.36 Acer truncatum HOM05D004896 ORTHO05D006447 6.3e-22 109.0 65 78.5
Atru.chr2.563 Acer truncatum HOM05D004866 ORTHO05D005716 1.4e-21 107.8 65 78.5
BcaC04g20647 Brassica carinata HOM05D004896 ORTHO05D006447 6.9e-21 105.5 73 69.9
C09p41080 Brassica napus HOM05D004896 ORTHO05D028223 6.9e-21 105.5 73 69.9
BolC9t56987H Brassica oleracea HOM05D004896 ORTHO05D028223 6.9e-21 105.5 73 69.9
BraA05t20477Z Brassica rapa HOM05D004896 ORTHO05D024046 5.9e-20 102.4 71 66.2
Ah.07g205180 Amaranthus hybridus HOM05D004896 ORTHO05D060504 1.1e-18 98.2 144 43.8
Cre17.g726250 Chlamydomonas reinhardtii HOM05D004896 ORTHO05D006447 1.1e-18 98.2 184 32.6
Atru.chr1.2050 Acer truncatum HOM05D004896 ORTHO05D006447 1.0e-16 91.7 63 71.4
BcaB01g05885 Brassica carinata HOM05D004896 ORTHO05D024046 1.1e-15 88.2 80 56.2
MBI19_g02443_MAGBIO Magnolia biondii HOM05D004896 ORTHO05D006447 2.0e-15 87.4 58 75.9
BolC7t42010H Brassica oleracea HOM05D004896 ORTHO05D028223 7.4e-15 85.5 51 78.4
A05p15620 Brassica napus HOM05D004896 ORTHO05D024046 6.3e-14 82.4 46 80.4
BcaC01g04583 Brassica carinata HOM05D004896 ORTHO05D006447 2.0e-12 77.4 46 78.3
Actinidia35788 Actinidia chinensis HOM05D004896 ORTHO05D006447 2.5e-10 70.5 151 37.1
TAR628G1566 Trochodendron aralioides HOM05D004896 ORTHO05D006447 1.8e-08 64.3 46 60.9


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