Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sc03g0005860 Simmondsia chinensis HOM05D010546 ORTHO05D013352 1.3e-129 466.5 238 100.0
Sc07g0005550 Simmondsia chinensis HOM05D010546 ORTHO05D013352 1.3e-81 307.0 275 61.5
Sc03g0004790 Simmondsia chinensis HOM05D010546 ORTHO05D013352 4.0e-43 179.1 240 48.3
Sc01g0006440 Simmondsia chinensis HOM05D010546 ORTHO05D013352 1.3e-38 164.1 110 73.6
Sc17g0003010 Simmondsia chinensis HOM05D010546 ORTHO05D013352 1.6e-36 157.1 109 71.6
Sc12g0008070 Simmondsia chinensis HOM05D010546 ORTHO05D013352 6.2e-36 155.2 120 67.5
Sc19g0006150 Simmondsia chinensis HOM05D010546 ORTHO05D013352 3.1e-35 152.9 137 59.1
Sc02g0004550 Simmondsia chinensis HOM05D010546 ORTHO05D013352 6.8e-35 151.8 109 70.6
Sc17g0002940 Simmondsia chinensis HOM05D010546 ORTHO05D013352 2.6e-34 149.8 108 69.4
Sc07g0004880 Simmondsia chinensis HOM05D010546 ORTHO05D013352 3.4e-34 149.4 108 71.3
Sc08g0006140 Simmondsia chinensis HOM05D010546 ORTHO05D013352 5.8e-34 148.7 109 68.8
Sc22g0004340 Simmondsia chinensis HOM05D010546 ORTHO05D013352 3.2e-32 142.9 109 66.1
Sc05g0002990 Simmondsia chinensis HOM05D010546 ORTHO05D013352 1.6e-28 130.6 89 71.9
Sc08g0003480 Simmondsia chinensis HOM05D010546 ORTHO05D013352 6.2e-28 128.6 83 78.3
EL10Ac7g17511 Beta vulgaris HOM05D000107 ORTHO05D000062 1.7e-22 110.5 172 42.4
Solyc11g032040.3 Solanum lycopersicum HOM05D000107 ORTHO05D000062 4.3e-21 105.9 150 44.0
Sc01g0004560 Simmondsia chinensis HOM05D010546 ORTHO05D013352 5.6e-21 105.5 72 76.4
Solyc10g017750.2 Solanum lycopersicum HOM05D003888 ORTHO05D007163 7.3e-21 105.1 159 40.9
PGSC0003DMG400003494 Solanum tuberosum HOM05D003888 ORTHO05D007163 6.9e-19 98.6 174 36.2
EL10Ac2g03235 Beta vulgaris HOM05D000107 ORTHO05D000062 1.7e-17 94.0 188 36.2
PGSC0003DMG400036468 Solanum tuberosum HOM05D003888 ORTHO05D007163 4.9e-17 92.4 223 30.9
EL10Ac9g22721 Beta vulgaris HOM05D000107 ORTHO05D000062 2.4e-16 90.1 166 37.3
Sc09g0006360 Simmondsia chinensis HOM05D010546 ORTHO05D013352 9.3e-16 88.2 71 63.4
Sc16g0004400 Simmondsia chinensis HOM05D010546 ORTHO05D013352 2.7e-15 86.7 56 78.6
Sc07g0004340 Simmondsia chinensis HOM05D010546 ORTHO05D013352 6.0e-15 85.5 76 60.5
EL10Ac3g06448 Beta vulgaris HOM05D003888 ORTHO05D007163 7.9e-15 85.1 239 31.4
EL10Ac9g20782 Beta vulgaris HOM05D010317 ORTHO05D007163 1.8e-14 84.0 80 52.5
EL10Ac1g01767 Beta vulgaris HOM05D003888 ORTHO05D007163 3.0e-14 83.2 297 28.3
EL10Ac7g16364 Beta vulgaris HOM05D000107 ORTHO05D000062 3.0e-14 83.2 230 30.9
EL10Ac4g09128 Beta vulgaris HOM05D000107 ORTHO05D000062 3.9e-14 82.8 236 29.2
EL10Ac2g02915 Beta vulgaris HOM05D000107 ORTHO05D000062 5.1e-14 82.4 304 25.0
PGSC0003DMG400046763 Solanum tuberosum HOM05D003888 ORTHO05D007163 6.7e-14 82.0 219 28.3
PGSC0003DMG400017141 Solanum tuberosum HOM05D003888 ORTHO05D007163 1.5e-13 80.9 115 40.9
PGSC0003DMG400039182 Solanum tuberosum HOM05D003888 ORTHO05D007163 1.9e-13 80.5 265 25.7
EL10Ac1g02206 Beta vulgaris HOM05D000107 ORTHO05D000062 2.5e-13 80.1 89 47.2
AUR62024779 Chenopodium quinoa HOM05D003888 ORTHO05D007163 3.3e-13 79.7 113 41.6
AUR62025805 Chenopodium quinoa HOM05D003888 ORTHO05D007163 3.3e-13 79.7 124 39.5
PGSC0003DMG400035776 Solanum tuberosum HOM05D003888 ORTHO05D007163 7.4e-13 78.6 263 25.5
EL10Ac4g09268 Beta vulgaris HOM05D000107 ORTHO05D000062 1.6e-12 77.4 228 28.1
AUR62022285 Chenopodium quinoa HOM05D003888 ORTHO05D007163 2.1e-12 77.0 69 53.6
EL10Ac2g03313 Beta vulgaris HOM05D000107 ORTHO05D000062 2.8e-12 76.6 109 41.3
EL10Ac6g14230 Beta vulgaris HOM05D000107 ORTHO05D000062 8.1e-12 75.1 242 28.1
Hund12964 Selenicereus undatus HOM05D009146 ORTHO05D011649 8.1e-12 75.1 144 36.8
EL10Ac9g20800 Beta vulgaris HOM05D003888 ORTHO05D007163 1.1e-11 74.7 78 48.7
EL10Ac9g20933 Beta vulgaris HOM05D000107 ORTHO05D007163 1.1e-11 74.7 74 55.4
EL10Ac6g13838 Beta vulgaris HOM05D003888 ORTHO05D007163 5.3e-11 72.4 228 29.4
PGSC0003DMG400038965 Solanum tuberosum HOM05D003888 ORTHO05D007163 5.3e-11 72.4 239 26.4
PGSC0003DMG400044246 Solanum tuberosum HOM05D003888 ORTHO05D007163 5.3e-11 72.4 183 27.9
EL10Ac5g11043 Beta vulgaris HOM05D000107 ORTHO05D007163 1.2e-10 71.2 131 38.2
EL10Ac5g11837 Beta vulgaris HOM05D000107 ORTHO05D000062 2.0e-10 70.5 266 26.7
Solyc04g005730.3 Solanum lycopersicum HOM05D003888 ORTHO05D007163 4.5e-10 69.3 195 30.3
EL10Ac4g09043 Beta vulgaris HOM05D003888 ORTHO05D007163 5.8e-10 68.9 264 26.9
Hund10867 Selenicereus undatus HOM05D009146 ORTHO05D011649 5.8e-10 68.9 109 40.4
PGSC0003DMG400010920 Solanum tuberosum HOM05D003888 ORTHO05D007163 5.8e-10 68.9 112 34.8
EL10Ac1g02033 Beta vulgaris HOM05D003888 ORTHO05D007163 7.6e-10 68.6 131 38.2
Sopen11g014670 Solanum pennellii HOM05D003888 ORTHO05D007163 7.6e-10 68.6 112 35.7
EL10Ac9g20905 Beta vulgaris HOM05D003888 ORTHO05D007163 1.0e-09 68.2 131 37.4
EL10Ac3g06642 Beta vulgaris HOM05D000107 ORTHO05D000062 1.3e-09 67.8 73 45.2
EL10Ac4g08946 Beta vulgaris HOM05D000107 ORTHO05D007163 2.2e-09 67.0 256 26.6
Sc11g0003730 Simmondsia chinensis HOM05D010546 ORTHO05D388761 2.2e-09 67.0 52 69.2
EL10Ac2g03866 Beta vulgaris HOM05D000107 ORTHO05D007163 6.4e-09 65.5 79 48.1
EL10Ac8g19343 Beta vulgaris HOM05D000107 ORTHO05D007163 1.1e-08 64.7 114 39.5
Hund15065 Selenicereus undatus HOM05D009146 ORTHO05D011649 4.2e-08 62.8 109 37.6
PGSC0003DMG400037028 Solanum tuberosum HOM05D003888 ORTHO05D007163 7.1e-08 62.0 125 36.0
Hund03533 Selenicereus undatus HOM05D009146 ORTHO05D011649 1.2e-07 61.2 116 37.1
PGSC0003DMG400010915 Solanum tuberosum HOM05D003888 ORTHO05D007163 1.6e-07 60.8 93 37.6
Sopen02g012530 Solanum pennellii HOM05D003888 ORTHO05D007163 2.7e-07 60.1 103 35.0
Nitab4.5_0012868g0030 Nicotiana tabacum HOM05D003888 ORTHO05D007163 4.6e-07 59.3 70 41.4
Sopen10g017940 Solanum pennellii HOM05D003888 ORTHO05D007163 4.6e-07 59.3 85 37.6
EL10Ac2g03389 Beta vulgaris HOM05D000107 ORTHO05D000062 6.0e-07 58.9 50 58.0
Solyc10g049330.3 Solanum lycopersicum HOM05D003888 ORTHO05D007163 7.9e-07 58.5 131 29.0
Sc02g0005550 Simmondsia chinensis HOM05D003888 ORTHO05D011649 1.3e-06 57.8 104 35.6
Solyc07g039250.1 Solanum lycopersicum HOM05D003888 ORTHO05D007163 1.3e-06 57.8 71 42.3
CAN.G133.3 Capsicum annuum HOM05D003888 ORTHO05D007163 2.3e-06 57.0 77 41.6
CAN.G1224.2 Capsicum annuum HOM05D003888 ORTHO05D007163 3.0e-06 56.6 126 30.2
CAN.G563.1 Capsicum annuum HOM05D003888 ORTHO05D007163 3.9e-06 56.2 91 39.6
PGSC0003DMG400005234 Solanum tuberosum HOM05D003888 ORTHO05D007163 5.1e-06 55.8 100 34.0
EL10Ac6g13912 Beta vulgaris HOM05D000107 ORTHO05D000062 6.7e-06 55.5 90 37.8


User provided reference genes

Program Settings