Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sc03g0005810 Simmondsia chinensis HOM05D010674 ORTHO05D012685 5.0e-137 491.1 251 100.0
Sc11g0002590 Simmondsia chinensis HOM05D010674 ORTHO05D012685 7.3e-112 407.5 285 78.2
Sc17g0004480 Simmondsia chinensis HOM05D010674 ORTHO05D012685 2.4e-99 365.9 269 75.8
Sc10g0005220 Simmondsia chinensis HOM05D010674 ORTHO05D012685 6.7e-73 278.1 251 64.9
Sc18g0002940 Simmondsia chinensis HOM05D010674 ORTHO05D012685 6.1e-50 201.8 202 58.9
Sc18g0002930 Simmondsia chinensis HOM05D010674 ORTHO05D012685 7.9e-50 201.4 121 84.3
Sc05g0002760 Simmondsia chinensis HOM05D010674 ORTHO05D012685 1.3e-44 184.1 119 84.9
Sc11g0003480 Simmondsia chinensis HOM05D010674 ORTHO05D012685 1.7e-36 157.1 249 41.4
Sc11g0005960 Simmondsia chinensis HOM05D010674 ORTHO05D012685 7.5e-32 141.7 253 38.3
Sc08g0004310 Simmondsia chinensis HOM05D010674 ORTHO05D012685 2.2e-31 140.2 119 67.2
Sc12g0007830 Simmondsia chinensis HOM05D010674 ORTHO05D012685 5.4e-30 135.6 113 67.3
Sc08g0005020 Simmondsia chinensis HOM05D004066 ORTHO05D004434 1.2e-29 134.4 256 36.7
Sc08g0003870 Simmondsia chinensis HOM05D010674 ORTHO05D012685 1.0e-25 121.3 247 34.4
Sc25g0004080 Simmondsia chinensis HOM05D010674 ORTHO05D012685 9.8e-24 114.8 69 81.2
Sc11g0006030 Simmondsia chinensis HOM05D010674 ORTHO05D012685 2.4e-22 110.2 258 32.6
Sc25g0003090 Simmondsia chinensis HOM05D010674 ORTHO05D012685 5.9e-21 105.5 97 59.8
Sc02g0004660 Simmondsia chinensis HOM05D010674 ORTHO05D012685 3.3e-19 99.8 183 37.2
Sc02g0005790 Simmondsia chinensis HOM05D010674 ORTHO05D012685 1.6e-18 97.4 107 53.3
Sc11g0006000 Simmondsia chinensis HOM05D004066 ORTHO05D004434 1.2e-13 81.3 206 30.6
Hund07415 Selenicereus undatus HOM05D004066 ORTHO05D004434 5.9e-13 79.0 217 29.5
Sc14g0001950 Simmondsia chinensis HOM05D010674 ORTHO05D012685 1.7e-12 77.4 57 64.9
EL10Ac9g21493 Beta vulgaris HOM05D001385 ORTHO05D004434 5.6e-11 72.4 171 31.6
vmacro03917 Vaccinium macrocarpon HOM05D008488 ORTHO05D000385 1.6e-10 70.9 195 30.3
Sc02g0005590 Simmondsia chinensis HOM05D010674 ORTHO05D012685 4.0e-09 66.2 70 44.3
Solyc04g150154.1 Solanum lycopersicum HOM05D001309 ORTHO05D000385 5.2e-09 65.9 157 31.2
Manes.16G033751 Manihot esculenta HOM05D001309 ORTHO05D000385 6.8e-09 65.5 192 24.5
vmacro21926 Vaccinium macrocarpon HOM05D008488 ORTHO05D000385 6.8e-09 65.5 214 29.0
vmacro23420 Vaccinium macrocarpon HOM05D008488 ORTHO05D000385 6.8e-09 65.5 214 29.0
Nitab4.5_0004285g0030 Nicotiana tabacum HOM05D001309 ORTHO05D000385 3.4e-08 63.2 193 29.5
vmacro03942 Vaccinium macrocarpon HOM05D008488 ORTHO05D000385 4.4e-08 62.8 139 31.7
AUR62010149 Chenopodium quinoa HOM05D001385 ORTHO05D004434 5.8e-08 62.4 107 34.6
Nitab4.5_0016483g0010 Nicotiana tabacum HOM05D001309 ORTHO05D000385 5.8e-08 62.4 199 29.1
Nitab4.5_0000024g0080 Nicotiana tabacum HOM05D001309 ORTHO05D000385 9.8e-08 61.6 177 27.1
Nitab4.5_0000804g0010 Nicotiana tabacum HOM05D001309 ORTHO05D000385 2.2e-07 60.5 223 26.9
Hund10300 Selenicereus undatus HOM05D004066 ORTHO05D004434 2.2e-07 60.5 229 27.9
Hund22136 Selenicereus undatus HOM05D001385 ORTHO05D004434 3.7e-07 59.7 105 33.3
Sc13g0007340 Simmondsia chinensis HOM05D001385 ORTHO05D004434 6.4e-07 58.9 204 28.9
AUR62028470 Chenopodium quinoa HOM05D001385 ORTHO05D008760 8.3e-07 58.5 194 25.8
Hund28935 Selenicereus undatus HOM05D004066 ORTHO05D004434 8.3e-07 58.5 270 25.2
EL10Ac1g01131 Beta vulgaris HOM05D001385 ORTHO05D008760 1.1e-06 58.2 104 32.7
Hund22037 Selenicereus undatus HOM05D004066 ORTHO05D004434 1.1e-06 58.2 240 23.8
EL10Ac1g01188 Beta vulgaris HOM05D001385 ORTHO05D008760 1.4e-06 57.8 73 37.0
EL10Ac2g03907 Beta vulgaris HOM05D001385 ORTHO05D008760 1.4e-06 57.8 73 37.0
EL10Ac4g08894 Beta vulgaris HOM05D001385 ORTHO05D008760 1.4e-06 57.8 73 37.0
EL10Ac4g09023 Beta vulgaris HOM05D001385 ORTHO05D008760 1.4e-06 57.8 73 37.0
EL10Ac6g14099 Beta vulgaris HOM05D001385 ORTHO05D008760 1.4e-06 57.8 73 37.0
EL10Ac9g21092 Beta vulgaris HOM05D001385 ORTHO05D008760 1.4e-06 57.8 73 37.0
MBI15_g13426_MAGBIO Magnolia biondii HOM05D001309 ORTHO05D000385 1.4e-06 57.8 157 29.9
AUR62032223 Chenopodium quinoa HOM05D008576 ORTHO05D003213 1.9e-06 57.4 207 25.6
COL.COLO4_15867 Corchorus olitorius HOM05D001309 ORTHO05D004434 1.9e-06 57.4 180 28.9
Nitab4.5_0004695g0040 Nicotiana tabacum HOM05D001309 ORTHO05D000385 1.9e-06 57.4 194 28.9
AUR62044135 Chenopodium quinoa HOM05D001385 ORTHO05D008760 2.4e-06 57.0 220 28.2
AUR62013145 Chenopodium quinoa HOM05D001385 ORTHO05D000378 3.2e-06 56.6 103 34.0
AUR62039827 Chenopodium quinoa HOM05D000107 ORTHO05D000062 3.2e-06 56.6 164 30.5
AUR62041672 Chenopodium quinoa HOM05D001309 ORTHO05D000385 4.1e-06 56.2 110 31.8
Nitab4.5_0000285g0070 Nicotiana tabacum HOM05D001309 ORTHO05D000385 4.1e-06 56.2 150 29.3
Nitab4.5_0010441g0010 Nicotiana tabacum HOM05D001309 ORTHO05D000385 4.1e-06 56.2 186 27.4
PGR044G2317 Punica granatum HOM05D001309 ORTHO05D000385 4.1e-06 56.2 154 27.9
Hund22058 Selenicereus undatus HOM05D004066 ORTHO05D004434 5.4e-06 55.8 217 24.9
Sc24g0000400 Simmondsia chinensis HOM05D003761 ORTHO05D004412 5.4e-06 55.8 43 65.1
Sc17g0003390 Simmondsia chinensis HOM05D009609 ORTHO05D011572 9.2e-06 55.1 187 27.3


User provided reference genes

Program Settings