Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sc03g0005610 Simmondsia chinensis HOM05D006925 ORTHO05D008830 3.6e-160 568.2 282 100.0
Dinv30983 Davidia involucrata HOM05D006925 ORTHO05D008830 1.1e-103 380.6 222 81.5
Hma1.2p1_0157F.1_g069250 Hydrangea macrophylla HOM05D006925 ORTHO05D008830 6.1e-99 364.8 243 74.5
GSVIVG01023121001 Vitis vinifera HOM05D006925 ORTHO05D008830 6.1e-99 364.8 233 75.5
MSTRG.16455 Avicennia marina HOM05D006925 ORTHO05D008830 8.0e-99 364.4 234 74.8
TWI14G0460 Tripterygium wilfordii HOM05D006925 ORTHO05D008830 2.3e-98 362.8 245 74.7
Ah.02g128580 Amaranthus hybridus HOM05D006925 ORTHO05D008830 3.0e-98 362.5 235 75.7
Cfa004416 Carpinus fangiana HOM05D006925 ORTHO05D008830 4.0e-98 362.1 217 79.3
CSS0028149 Camellia sinensis var. sinensis HOM05D006925 ORTHO05D008830 5.2e-98 361.7 220 76.4
CSS0004280 Camellia sinensis var. sinensis HOM05D006925 ORTHO05D008830 6.7e-98 361.3 219 76.7
QL02p103778 Quercus lobata HOM05D006925 ORTHO05D008830 4.4e-97 358.6 209 80.9
MBI06_g17054_MAGBIO Magnolia biondii HOM05D006925 ORTHO05D008830 2.2e-96 356.3 233 73.8
Potri.003G046600 Populus trichocarpa HOM05D006925 ORTHO05D008830 3.7e-96 355.5 219 79.0
Sabra03G0019700 Salix brachista HOM05D006925 ORTHO05D000812 6.3e-96 354.8 219 78.1
CAN.G402.4 Capsicum annuum HOM05D006925 ORTHO05D008830 8.2e-96 354.4 231 74.0
Cc02_g23820 Coffea canephora HOM05D006925 ORTHO05D008830 1.1e-95 354.0 221 76.5
CiPaw.05G000400 Carya illinoinensis HOM05D006925 ORTHO05D008830 2.4e-95 352.8 217 76.5
CANSAT01G0563 Cannabis sativa HOM05D006925 ORTHO05D008830 4.1e-95 352.1 216 77.3
Thecc.06G062200 Theobroma cacao HOM05D006925 ORTHO05D008830 4.1e-95 352.1 218 78.4
ATR1089G139 Amborella trichopoda HOM05D006925 ORTHO05D008830 5.3e-95 351.7 226 76.1
PGSC0003DMG400003436 Solanum tuberosum HOM05D006925 ORTHO05D008830 7.0e-95 351.3 218 77.5
Peaxi162Scf00055g00018 Petunia axillaris HOM05D006925 ORTHO05D008830 9.1e-95 350.9 203 81.3
Gohir.A10G068400 Gossypium hirsutum HOM05D006925 ORTHO05D008830 1.2e-94 350.5 221 76.0
Nitab4.5_0002274g0030 Nicotiana tabacum HOM05D006925 ORTHO05D008830 1.2e-94 350.5 220 77.3
Sopen10g013620 Solanum pennellii HOM05D006925 ORTHO05D008830 1.2e-94 350.5 218 78.0
Solyc10g044840.2 Solanum lycopersicum HOM05D006925 ORTHO05D008830 2.6e-94 349.4 218 77.5
Gohir.D10G082800 Gossypium hirsutum HOM05D006925 ORTHO05D008830 5.9e-94 348.2 221 75.6
Gorai.011G089700 Gossypium raimondii HOM05D006925 ORTHO05D008830 5.9e-94 348.2 221 75.6
Migut.B00701 Erythranthe guttata HOM05D006925 ORTHO05D008830 7.7e-94 347.8 222 74.8
COL.COLO4_31098 Corchorus olitorius HOM05D006925 ORTHO05D008830 1.3e-93 347.1 217 76.5
HanXRQChr03g0071141 Helianthus annuus HOM05D006925 ORTHO05D008830 1.7e-93 346.7 234 72.2
THA.LOC104824095 Tarenaya hassleriana HOM05D006925 ORTHO05D008830 1.7e-93 346.7 204 78.4
ClCG10G007640 Citrullus lanatus HOM05D006925 ORTHO05D008830 2.9e-93 345.9 199 81.4
Lsat_1_v5_gn_7_69720 Lactuca sativa HOM05D006925 ORTHO05D008830 2.9e-93 345.9 222 75.2
DCAR_004828 Daucus carota HOM05D006925 ORTHO05D008830 1.1e-92 344.0 237 70.5
Actinidia00135 Actinidia chinensis HOM05D006925 ORTHO05D008830 1.9e-92 343.2 220 75.9
Haze_09956 Corylus avellana HOM05D006925 ORTHO05D008830 5.5e-92 341.7 231 74.0
Duzib160G0166 Durio zibethinus HOM05D006925 ORTHO05D008830 5.5e-92 341.7 218 75.7
Manes.06G015100 Manihot esculenta HOM05D006925 ORTHO05D008830 1.2e-91 340.5 204 79.4
unitig_8.g4519 Utricularia gibba HOM05D006925 ORTHO05D008830 1.2e-91 340.5 220 72.3
PGR042G2053 Punica granatum HOM05D006925 ORTHO05D008830 2.7e-91 339.3 214 75.2
ECA248G0237 Erigeron canadensis HOM05D002199 ORTHO05D007829 4.7e-91 338.6 205 78.0
Eucgr.G00053 Eucalyptus grandis HOM05D006925 ORTHO05D008830 6.1e-91 338.2 203 81.3
CDE05G0936 Ceratophyllum demersum HOM05D006925 ORTHO05D008830 3.0e-90 335.9 233 70.0
CsaV3_3G006780 Cucumis sativus L. HOM05D006925 ORTHO05D008830 3.0e-90 335.9 196 79.6
Prupe.1G587400 Prunus persica HOM05D006925 ORTHO05D008830 3.0e-90 335.9 210 77.6
Sp2g13680 Schrenkiella parvula HOM05D006925 ORTHO05D008830 1.5e-89 333.6 218 74.8
RcHm_v2.0_Chr7g0218321 Rosa chinensis HOM05D006925 ORTHO05D008830 2.6e-89 332.8 219 74.4
MD15G1445500 Malus domestica HOM05D006925 ORTHO05D008830 4.4e-89 332.0 222 75.2
arahy.Tifrunner.gnm1.ann1.EDE5FN Arachis hypogaea HOM05D006925 ORTHO05D008830 1.7e-88 330.1 204 77.5
EL10Ac6g13952 Beta vulgaris HOM05D006925 ORTHO05D008830 2.2e-88 329.7 289 60.2
BcaC06g31233 Brassica carinata HOM05D006925 ORTHO05D008830 4.8e-88 328.6 223 72.2
Glyma.07G271000 Glycine max HOM05D006925 ORTHO05D008830 4.8e-88 328.6 206 75.2
Phvul.003G090400 Phaseolus vulgaris HOM05D006925 ORTHO05D008830 6.3e-88 328.2 218 73.9
AL5G11640 Arabidopsis lyrata HOM05D006925 ORTHO05D008830 1.4e-87 327.0 219 73.5
A06p43640 Brassica napus HOM05D006925 ORTHO05D008830 1.4e-87 327.0 222 73.0
BraA06t27246Z Brassica rapa HOM05D006925 ORTHO05D008830 1.4e-87 327.0 222 73.0
Aqoxy5G01835 Aquilegia oxysepala HOM05D006925 ORTHO05D008830 3.1e-87 325.9 206 74.3
VMungo1215G1006 Vigna mungo HOM05D006925 ORTHO05D008830 7.0e-87 324.7 219 72.1
arahy.Tifrunner.gnm1.ann1.MTF64G Arachis hypogaea HOM05D006925 ORTHO05D008830 1.2e-86 323.9 203 76.4
Thhalv10004663m.g Eutrema salsugineum HOM05D006925 ORTHO05D008830 1.2e-86 323.9 216 71.3
BcaC06g34054 Brassica carinata HOM05D006925 ORTHO05D008830 1.6e-86 323.6 229 70.3
C07p33220 Brassica napus HOM05D006925 ORTHO05D008830 1.6e-86 323.6 229 70.3
BolC7t43833H Brassica oleracea HOM05D006925 ORTHO05D008830 1.6e-86 323.6 229 70.3
PSO210G4845 Papaver somniferum HOM05D006925 ORTHO05D008830 1.6e-86 323.6 216 72.7
AUR62032491 Chenopodium quinoa HOM05D006925 ORTHO05D008830 1.7e-85 320.1 195 80.0
FAN08G3037 Fragaria x ananassa HOM05D006925 ORTHO05D008830 2.9e-85 319.3 196 78.1
FAN18G1352 Fragaria x ananassa HOM05D006925 ORTHO05D008830 2.9e-85 319.3 196 78.1
FvH4_5g27220 Fragaria vesca HOM05D006925 ORTHO05D008830 8.5e-85 317.8 196 77.6
Sed0012673 Sechium edule HOM05D006925 ORTHO05D008830 1.1e-84 317.4 194 76.8
Hund15314 Selenicereus undatus HOM05D006925 ORTHO05D008830 1.5e-84 317.0 219 73.1
Ca_13518_v3 Cicer arietinum L. HOM05D006925 ORTHO05D008830 1.9e-84 316.6 200 76.5
Lj4g0023352 Lotus japonicus HOM05D006925 ORTHO05D008830 1.9e-84 316.6 218 70.6
Nn5g27113 Nelumbo nucifera HOM05D006925 ORTHO05D008830 7.2e-84 314.7 180 80.0
SGA_v2.0_scaffold254G45226 Striga asiatica HOM05D006925 ORTHO05D008830 2.7e-83 312.8 283 55.8
Lalb_Chr07g0176851 Lupinus albus HOM05D006925 ORTHO05D008830 1.4e-82 310.5 200 72.5
Aa31LG2G7670 Aethionema arabicum HOM05D006925 ORTHO05D008830 1.5e-81 307.0 218 70.6
AUR62040119 Chenopodium quinoa HOM05D006925 ORTHO05D008830 1.8e-79 300.1 227 68.7
Medtr4g134410 Medicago truncatula HOM05D006925 ORTHO05D008830 4.1e-79 298.9 203 71.9
HPP92_001204 Vanilla planifolia HOM05D006925 ORTHO05D008830 4.1e-79 298.9 266 57.5
FAN13G1230 Fragaria x ananassa HOM05D006925 ORTHO05D008830 7.7e-78 294.7 186 75.3
Nitab4.5_0000288g0050 Nicotiana tabacum HOM05D006925 ORTHO05D008830 1.2e-75 287.3 220 66.4
MELO3C016443.2 Cucumis melo HOM05D006925 ORTHO05D008830 4.7e-75 285.4 166 81.3
Carub.0005s0146 Capsella rubella HOM05D006925 ORTHO05D008830 8.0e-75 284.6 170 79.4
Lj5A307T31 Lonicera japonica HOM05D006925 ORTHO05D008830 6.8e-74 281.6 191 70.7
Psat4g001760 Pisum sativum HOM05D006925 ORTHO05D008830 7.0e-71 271.6 205 63.9
TAR628G1169 Trochodendron aralioides HOM05D006925 ORTHO05D008830 1.2e-70 270.8 180 72.8
Mapoly0001s0380 Marchantia polymorpha HOM05D006925 ORTHO05D008830 3.5e-70 269.2 206 65.5
vmacro01630 Vaccinium macrocarpon HOM05D006925 ORTHO05D008830 5.9e-70 268.5 208 65.4
TPR.G5931 Trifolium pratense HOM05D006925 ORTHO05D008830 1.2e-65 254.2 208 62.0
Pp3c15_4340 Physcomitrium patens HOM05D006925 ORTHO05D008830 3.4e-65 252.7 208 59.6
CARHR144990 Cardamine hirsuta HOM05D006925 ORTHO05D008830 2.9e-64 249.6 177 69.5
Zm00001eb064090 Zea mays HOM05D006925 ORTHO05D008830 1.4e-63 247.3 180 68.3
Pp3c9_8480 Physcomitrium patens HOM05D006925 ORTHO05D008830 6.0e-62 241.9 201 58.7
SMO358G0233 Selaginella moellendorffii HOM05D006925 ORTHO05D008830 1.5e-60 237.3 198 59.1
AagrBONN_evm.TU.Sc2ySwM_369.585 Anthoceros agrestis HOM05D006925 ORTHO05D008830 1.9e-60 236.9 238 54.2
AT2G02410 Arabidopsis thaliana HOM05D006925 ORTHO05D008830 3.3e-60 236.1 205 61.0
SEGI_06138 Sequoiadendron giganteum HOM05D006925 ORTHO05D008830 7.8e-54 214.9 224 52.7
Sabra03G0019900 Salix brachista HOM05D006925 ORTHO05D008830 1.2e-51 207.6 140 73.6
Ciclev10003645m.g Citrus clementina HOM05D006925 ORTHO05D008830 2.9e-48 196.4 127 74.0
Rhsim11G0114700 Rhododendron simsii HOM05D006925 ORTHO05D008830 1.2e-46 191.0 260 44.2
Oeu016658.1 Olea europaea HOM05D006925 ORTHO05D008830 6.4e-24 115.5 82 65.9
SMO201G0205 Selaginella moellendorffii HOM05D006925 ORTHO05D008830 2.7e-22 110.2 83 56.6
SEGI_30664 Sequoiadendron giganteum HOM05D006925 ORTHO05D008830 1.0e-21 108.2 140 48.6
CBR_g49407 Chara braunii HOM05D000019 ORTHO05D000002 5.6e-20 102.4 119 47.1
SMO199G0001 Selaginella moellendorffii HOM05D006925 ORTHO05D008830 2.2e-16 90.5 69 58.0
TAR628G1563 Trochodendron aralioides HOM05D006925 ORTHO05D008830 1.4e-15 87.8 43 90.7
Os03g0843200 Oryza sativa ssp. japonica HOM05D006925 ORTHO05D008830 5.5e-15 85.9 57 70.2
Glyma.17G002900 Glycine max HOM05D006925 ORTHO05D008830 2.7e-14 83.6 43 83.7
AL5G11650 Arabidopsis lyrata HOM05D006925 ORTHO05D008830 2.3e-13 80.5 43 83.7
Glyma.20G064100 Glycine max HOM05D006925 ORTHO05D008830 6.3e-11 72.4 41 75.6
PRCOL_00002508 Prasinoderma coloniale HOM05D006925 ORTHO05D008830 6.3e-11 72.4 151 33.8
CBR_g46374 Chara braunii HOM05D000019 ORTHO05D000353 1.1e-10 71.6 47 66.0


User provided reference genes

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