Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sc03g0005470 Simmondsia chinensis HOM05D007103 ORTHO05D008948 1.6e-244 849.0 433 100.0
GSVIVG01010248001 Vitis vinifera HOM05D007103 ORTHO05D008948 1.5e-133 480.3 460 59.6
AUR62003469 Chenopodium quinoa HOM05D007103 ORTHO05D008948 4.9e-132 475.3 438 60.3
Manes.10G065901 Manihot esculenta HOM05D007103 ORTHO05D008948 2.5e-128 463.0 455 58.5
TWI74G0969 Tripterygium wilfordii HOM05D007103 ORTHO05D008948 1.8e-126 456.8 458 57.0
Cfa015108 Carpinus fangiana HOM05D007103 ORTHO05D008948 3.1e-126 456.1 455 56.7
Prupe.1G342500 Prunus persica HOM05D007103 ORTHO05D008948 3.1e-126 456.1 465 55.7
Dinv06214 Davidia involucrata HOM05D007103 ORTHO05D008948 2.6e-125 453.0 448 58.3
Haze_01571 Corylus avellana HOM05D007103 ORTHO05D008948 2.2e-124 449.9 455 56.9
CsaV3_5G017430 Cucumis sativus L. HOM05D007103 ORTHO05D008948 2.4e-123 446.4 449 55.9
MELO3C005211.2 Cucumis melo HOM05D007103 ORTHO05D008948 1.6e-122 443.7 444 56.1
Sabra08G0108900 Salix brachista HOM05D007103 ORTHO05D008948 3.5e-122 442.6 446 54.7
TAR371G1171 Trochodendron aralioides HOM05D007103 ORTHO05D008948 4.6e-122 442.2 455 55.2
EL10Ac6g15409 Beta vulgaris HOM05D007103 ORTHO05D008948 1.9e-120 436.8 505 52.5
AUR62017776 Chenopodium quinoa HOM05D007103 ORTHO05D008948 2.5e-120 436.4 408 59.8
RcHm_v2.0_Chr4g0446051 Rosa chinensis HOM05D007103 ORTHO05D008948 4.3e-120 435.6 415 58.1
COL.COLO4_27515 Corchorus olitorius HOM05D007103 ORTHO05D008948 4.8e-119 432.2 387 58.7
MD13G1010500 Malus domestica HOM05D007103 ORTHO05D008948 8.1e-119 431.4 469 53.5
Sed0022925 Sechium edule HOM05D007103 ORTHO05D008948 2.4e-118 429.9 452 54.2
PSO478G2004 Papaver somniferum HOM05D007103 ORTHO05D008948 4.0e-118 429.1 455 54.9
Lj3A854G74 Lonicera japonica HOM05D007103 ORTHO05D008948 5.3e-118 428.7 463 54.9
PGR044G1063 Punica granatum HOM05D007103 ORTHO05D008948 6.9e-118 428.3 449 55.2
Thecc.02G296200 Theobroma cacao HOM05D007103 ORTHO05D008948 1.5e-117 427.2 455 54.5
HPP92_022082 Vanilla planifolia HOM05D007103 ORTHO05D008948 2.6e-117 426.4 454 55.5
HanXRQChr14g0446891 Helianthus annuus HOM05D007103 ORTHO05D008948 2.2e-116 423.3 448 54.9
QL03p041867 Quercus lobata HOM05D007103 ORTHO05D008948 2.2e-116 423.3 456 55.0
MSTRG.2093 Avicennia marina HOM05D007103 ORTHO05D008948 8.4e-116 421.4 456 54.8
Eucgr.B02623 Eucalyptus grandis HOM05D007103 ORTHO05D008948 1.4e-115 420.6 452 54.9
CANSAT78G0644 Cannabis sativa HOM05D007103 ORTHO05D008948 2.5e-115 419.9 450 53.8
Ciclev10005118m.g Citrus clementina HOM05D007103 ORTHO05D008948 2.5e-115 419.9 395 58.5
arahy.Tifrunner.gnm1.ann1.CDY64E Arachis hypogaea HOM05D007103 ORTHO05D008948 7.1e-115 418.3 445 52.6
arahy.Tifrunner.gnm1.ann1.U7H2Z0 Arachis hypogaea HOM05D007103 ORTHO05D008948 9.3e-115 417.9 445 52.6
Gohir.D01G137900 Gossypium hirsutum HOM05D007103 ORTHO05D008948 2.1e-114 416.8 453 53.9
Gorai.002G168100 Gossypium raimondii HOM05D007103 ORTHO05D008948 3.5e-114 416.0 453 54.1
CAN.G458.2 Capsicum annuum HOM05D007103 ORTHO05D008948 1.8e-113 413.7 396 57.6
FAN17G1256 Fragaria x ananassa HOM05D007103 ORTHO05D008948 3.0e-113 412.9 432 55.1
Potri.008G143700 Populus trichocarpa HOM05D007103 ORTHO05D008948 3.9e-113 412.5 418 54.8
FAN07G2615 Fragaria x ananassa HOM05D007103 ORTHO05D008948 1.1e-112 411.0 432 54.9
ATR0618G149 Amborella trichopoda HOM05D007103 ORTHO05D008948 1.9e-112 410.2 452 53.8
THA.LOC104805941 Tarenaya hassleriana HOM05D007103 ORTHO05D008948 4.3e-112 409.1 459 53.4
Gohir.A01G145152 Gossypium hirsutum HOM05D007103 ORTHO05D008948 5.7e-112 408.7 455 53.0
FAN12G1264 Fragaria x ananassa HOM05D007103 ORTHO05D008948 2.8e-111 406.4 432 54.6
Glyma.05G135400 Glycine max HOM05D007103 ORTHO05D008948 5.3e-110 402.1 436 52.8
Nn3g18722 Nelumbo nucifera HOM05D007103 ORTHO05D008948 5.3e-110 402.1 417 54.0
Ca_18212_v3 Cicer arietinum L. HOM05D007103 ORTHO05D008948 2.6e-109 399.8 427 53.2
CSS0049146 Camellia sinensis var. sinensis HOM05D007103 ORTHO05D008948 4.5e-109 399.1 445 52.8
Sopen04g003720 Solanum pennellii HOM05D007103 ORTHO05D008948 1.0e-108 397.9 457 52.1
CDE08G0078 Ceratophyllum demersum HOM05D007103 ORTHO05D008948 2.2e-108 396.7 447 52.3
Solyc04g008560.3 Solanum lycopersicum HOM05D007103 ORTHO05D008948 5.0e-108 395.6 457 51.9
PGSC0003DMG400031375 Solanum tuberosum HOM05D007103 ORTHO05D008948 5.0e-108 395.6 457 52.1
DCAR_030327 Daucus carota HOM05D007103 ORTHO05D008948 7.1e-107 391.7 444 50.7
Nitab4.5_0000129g0430 Nicotiana tabacum HOM05D007103 ORTHO05D008948 9.3e-107 391.3 459 52.5
Psat7g086680 Pisum sativum HOM05D007103 ORTHO05D008948 9.3e-107 391.3 427 51.3
Peaxi162Scf00329g00938 Petunia axillaris HOM05D007103 ORTHO05D008948 2.1e-106 390.2 451 51.7
AL5G11410 Arabidopsis lyrata HOM05D007103 ORTHO05D008948 3.5e-106 389.4 453 53.2
Rhsim04G0168800 Rhododendron simsii HOM05D007103 ORTHO05D008948 7.9e-106 388.3 518 47.3
Migut.E00576 Erythranthe guttata HOM05D007103 ORTHO05D008948 3.0e-105 386.3 477 50.5
MBI06_g12320_MAGBIO Magnolia biondii HOM05D007103 ORTHO05D008948 8.7e-105 384.8 314 65.3
Lj4g0001083 Lotus japonicus HOM05D007103 ORTHO05D008948 1.5e-104 384.0 427 51.8
Glyma.08G090600 Glycine max HOM05D007103 ORTHO05D008948 1.9e-104 383.6 383 56.4
Carub.0005s0121 Capsella rubella HOM05D007103 ORTHO05D008948 2.5e-104 383.3 448 52.5
Sp2g13560 Schrenkiella parvula HOM05D007103 ORTHO05D008948 4.3e-104 382.5 458 52.4
Nitab4.5_0007973g0020 Nicotiana tabacum HOM05D007103 ORTHO05D008948 5.7e-104 382.1 464 51.7
CiPaw.05G161900 Carya illinoinensis HOM05D007103 ORTHO05D008948 1.3e-103 380.9 313 64.5
unitig_8.g4025 Utricularia gibba HOM05D007103 ORTHO05D008948 1.6e-103 380.6 404 52.7
SGA_v2.0_scaffold127G33990 Striga asiatica HOM05D007103 ORTHO05D008948 2.2e-103 380.2 439 52.4
Lalb_Chr13g0293061 Lupinus albus HOM05D007103 ORTHO05D008948 2.8e-103 379.8 440 50.5
C09p30690 Brassica napus HOM05D007103 ORTHO05D008948 2.4e-102 376.7 450 52.0
BcaB07g30707 Brassica carinata HOM05D007103 ORTHO05D008948 3.1e-102 376.3 456 53.1
Lsat_1_v5_gn_3_27560 Lactuca sativa HOM05D007103 ORTHO05D008948 6.9e-102 375.2 443 49.2
BraA09t37988Z Brassica rapa HOM05D007103 ORTHO05D008948 1.2e-101 374.4 451 51.4
BcaC04g21529 Brassica carinata HOM05D007103 ORTHO05D008948 2.0e-101 373.6 450 51.8
Aqoxy3G00022 Aquilegia oxysepala HOM05D007103 ORTHO05D008948 3.4e-101 372.9 384 53.4
Aa31LG2G7810 Aethionema arabicum HOM05D007103 ORTHO05D008948 7.7e-101 371.7 458 51.3
BolC9t55934H Brassica oleracea HOM05D007103 ORTHO05D008948 1.0e-100 371.3 454 51.1
A09p23820 Brassica napus HOM05D007103 ORTHO05D008948 2.9e-100 369.8 454 51.1
ClCG01G007020 Citrullus lanatus HOM05D007103 ORTHO05D008948 3.8e-100 369.4 314 61.8
Thhalv10004194m.g Eutrema salsugineum HOM05D007103 ORTHO05D008948 1.9e-99 367.1 465 51.4
AT2G02148 Arabidopsis thaliana HOM05D007103 ORTHO05D008948 7.9e-98 361.7 452 51.8
TPR.G34765 Trifolium pratense HOM05D007103 ORTHO05D008948 7.9e-98 361.7 429 48.7
Actinidia32355 Actinidia chinensis HOM05D007103 ORTHO05D008948 1.5e-96 357.5 354 59.3
CARHR144820 Cardamine hirsuta HOM05D007103 ORTHO05D008948 2.0e-96 357.1 443 51.5
ECA246G2851 Erigeron canadensis HOM05D007103 ORTHO05D008948 4.3e-96 355.9 436 47.0
Ciclev10010767m.g Citrus clementina HOM05D007103 ORTHO05D008948 2.2e-95 353.6 250 70.4
Phvul.002G186800 Phaseolus vulgaris HOM05D007103 ORTHO05D008948 5.3e-94 349.0 434 47.5
Zm00001eb228800 Zea mays HOM05D007103 ORTHO05D008948 5.0e-92 342.4 389 50.1
vmacro08589 Vaccinium macrocarpon HOM05D007103 ORTHO05D008948 8.5e-92 341.7 327 58.4
PSO017G4620 Papaver somniferum HOM05D007103 ORTHO05D008948 1.4e-91 340.9 366 54.1
FAN22G0934 Fragaria x ananassa HOM05D007103 ORTHO05D008948 1.7e-87 327.4 393 48.6
FvH4_4g36300 Fragaria vesca HOM05D007103 ORTHO05D008948 2.8e-87 326.6 318 56.3
BcaB07g30709 Brassica carinata HOM05D007103 ORTHO05D008948 1.3e-79 301.2 359 50.1
VMungo0251G2627 Vigna mungo HOM05D007103 ORTHO05D008948 8.2e-79 298.5 384 46.1
SEGI_34932 Sequoiadendron giganteum HOM05D007103 ORTHO05D008948 1.0e-76 291.6 318 51.9
Mapoly0001s0015 Marchantia polymorpha HOM05D007103 ORTHO05D008948 4.8e-71 272.7 454 42.5
Pp3c6_26300 Physcomitrium patens HOM05D007103 ORTHO05D008948 1.4e-70 271.2 445 41.8
Pp3c5_2140 Physcomitrium patens HOM05D007103 ORTHO05D008948 8.5e-68 261.9 446 42.8
SMO358G0481 Selaginella moellendorffii HOM05D007103 ORTHO05D008948 2.5e-67 260.4 455 36.5
SalBow2G1702 Salvia bowleyana HOM05D007103 ORTHO05D008948 4.7e-66 256.1 273 54.6
Actinidia25204 Actinidia chinensis HOM05D007103 ORTHO05D008948 1.2e-64 251.5 166 74.1
Atru.chr11.1054 Acer truncatum HOM05D007103 ORTHO05D008948 8.3e-55 218.8 422 38.2
CBR_g70721 Chara braunii HOM05D007103 ORTHO05D008948 1.8e-54 217.6 361 39.1
AagrBONN_evm.TU.Sc2ySwM_368.3256 Anthoceros agrestis HOM05D007103 ORTHO05D008948 3.9e-52 209.9 311 38.6
Medtr5g010860 Medicago truncatula HOM05D007103 ORTHO05D008948 5.0e-44 183.0 183 57.9
Cpa.g.sc2.105 Carica papaya HOM05D007103 ORTHO05D008948 2.1e-42 177.6 218 52.8
Actinidia31381 Actinidia chinensis HOM05D007103 ORTHO05D008948 1.5e-35 154.8 394 34.3
Pp3c6_29570 Physcomitrium patens HOM05D007103 ORTHO05D008948 1.3e-31 141.7 179 44.7
Hund18263 Selenicereus undatus HOM05D007103 ORTHO05D008948 3.7e-31 140.2 176 47.7
Lsat_1_v5_gn_3_133181 Lactuca sativa HOM05D003297 ORTHO05D004027 4.3e-11 73.6 147 35.4
Cpa.g.sc2.103 Carica papaya HOM05D007103 ORTHO05D008948 4.8e-10 70.1 48 70.8
Medtr6g043130 Medicago truncatula HOM05D007103 ORTHO05D008948 1.4e-09 68.6 39 76.9


User provided reference genes

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