Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sc03g0005140 Simmondsia chinensis HOM05D007497 ORTHO05D009706 2.3e-38 161.8 83 100.0
Sc04g0010370 Simmondsia chinensis HOM05D007497 ORTHO05D009706 3.8e-09 64.7 36 88.9
Actinidia30617 Actinidia chinensis HOM05D007497 ORTHO05D009706 3.6e-07 58.2 38 71.1
EL10Ac6g13550 Beta vulgaris HOM05D007497 ORTHO05D009706 4.7e-07 57.8 36 77.8
Peaxi162Scf00255g00215 Petunia axillaris HOM05D007497 ORTHO05D009706 8.0e-07 57.0 36 75.0
Duzib052G0992 Durio zibethinus HOM05D007497 ORTHO05D009706 1.0e-06 56.6 57 52.6
GSVIVG01000925001 Vitis vinifera HOM05D007497 ORTHO05D009706 1.0e-06 56.6 76 44.7
Atru.chr11.2380 Acer truncatum HOM05D007497 ORTHO05D009706 1.4e-06 56.2 57 52.6
Actinidia25110 Actinidia chinensis HOM05D007497 ORTHO05D009706 1.4e-06 56.2 36 72.2
CANSAT01G1986 Cannabis sativa HOM05D007497 ORTHO05D009706 1.8e-06 55.8 36 75.0
Eucgr.H04604 Eucalyptus grandis HOM05D007497 ORTHO05D009706 1.8e-06 55.8 36 75.0
FAN07G1017 Fragaria x ananassa HOM05D007497 ORTHO05D009706 1.8e-06 55.8 36 75.0
FAN17G0169 Fragaria x ananassa HOM05D007497 ORTHO05D009706 1.8e-06 55.8 36 75.0
HanXRQChr12g0362241 Helianthus annuus HOM05D007497 ORTHO05D009706 1.8e-06 55.8 37 73.0
Nitab4.5_0004878g0020 Nicotiana tabacum HOM05D007497 ORTHO05D009706 1.8e-06 55.8 36 75.0
RcHm_v2.0_Chr4g0429611 Rosa chinensis HOM05D007497 ORTHO05D009706 1.8e-06 55.8 36 75.0
Thecc.02G199900 Theobroma cacao HOM05D007497 ORTHO05D009706 1.8e-06 55.8 55 54.5
Zm00001eb133110 Zea mays HOM05D007497 ORTHO05D009706 1.8e-06 55.8 33 81.8
AUR62005664 Chenopodium quinoa HOM05D007497 ORTHO05D009706 3.0e-06 55.1 36 72.2
AUR62028889 Chenopodium quinoa HOM05D007497 ORTHO05D009706 3.0e-06 55.1 36 72.2
DCAR_024649 Daucus carota HOM05D007497 ORTHO05D009706 3.0e-06 55.1 36 75.0
FvH4_4g23250 Fragaria vesca HOM05D007497 ORTHO05D009706 3.0e-06 55.1 36 72.2
FAN12G1328 Fragaria x ananassa HOM05D007497 ORTHO05D009706 3.0e-06 55.1 36 72.2
Hma1.2p1_0275F.1_g110530 Hydrangea macrophylla HOM05D007497 ORTHO05D009706 3.0e-06 55.1 76 44.7
Sabra01G0043200 Salix brachista HOM05D007497 ORTHO05D009706 3.0e-06 55.1 36 72.2
vmacro01041 Vaccinium macrocarpon HOM05D007497 ORTHO05D009706 3.0e-06 55.1 38 65.8
Cfa009399 Carpinus fangiana HOM05D007497 ORTHO05D009706 4.0e-06 54.7 36 72.2
Ciclev10031387m.g Citrus clementina HOM05D007497 ORTHO05D009706 4.0e-06 54.7 36 72.2
Lalb_Chr21g0307731 Lupinus albus HOM05D007497 ORTHO05D009706 4.0e-06 54.7 36 69.4
Oeu058905.2 Olea europaea HOM05D007497 ORTHO05D009706 4.0e-06 54.7 36 69.4
Solyc01g009940.1 Solanum lycopersicum HOM05D007497 ORTHO05D009706 4.0e-06 54.7 36 72.2
TAR622G0177 Trochodendron aralioides HOM05D007497 ORTHO05D009706 4.0e-06 54.7 36 72.2
CiPaw.05G105800 Carya illinoinensis HOM05D007497 ORTHO05D009706 5.2e-06 54.3 36 72.2
HanXRQChr12g0362231 Helianthus annuus HOM05D007497 ORTHO05D009706 5.2e-06 54.3 36 72.2
Nn4g22236 Nelumbo nucifera HOM05D007497 ORTHO05D009706 5.2e-06 54.3 33 72.7
Nitab4.5_0001771g0110 Nicotiana tabacum HOM05D007497 ORTHO05D009706 5.2e-06 54.3 36 69.4
PSO478G2787 Papaver somniferum HOM05D007497 ORTHO05D009706 5.2e-06 54.3 76 46.1
Sopen01g005520 Solanum pennellii HOM05D007497 ORTHO05D009706 5.2e-06 54.3 36 69.4
MELO3C017750.2 Cucumis melo HOM05D007497 ORTHO05D009706 6.8e-06 53.9 34 73.5
Gohir.A01G021900 Gossypium hirsutum HOM05D007497 ORTHO05D009706 6.8e-06 53.9 36 69.4
Manes.13G007600 Manihot esculenta HOM05D007497 ORTHO05D009706 8.8e-06 53.5 36 69.4
Prupe.1G221400 Prunus persica HOM05D007497 ORTHO05D009706 8.8e-06 53.5 36 72.2
PGR119G1254 Punica granatum HOM05D007497 ORTHO05D009706 8.8e-06 53.5 36 75.0
QL03p051279 Quercus lobata HOM05D007497 ORTHO05D009706 8.8e-06 53.5 36 72.2
Rhsim12G0023000 Rhododendron simsii HOM05D007497 ORTHO05D009706 8.8e-06 53.5 36 66.7
Hund06133 Selenicereus undatus HOM05D007497 ORTHO05D009706 8.8e-06 53.5 36 72.2
SEGI_22503 Sequoiadendron giganteum HOM05D007497 ORTHO05D009706 8.8e-06 53.5 36 72.2


User provided reference genes

Program Settings