Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sc03g0004870 Simmondsia chinensis HOM05D007912 ORTHO05D010251 9.0e-78 293.5 147 100.0
Sc03g0005210 Simmondsia chinensis HOM05D007912 ORTHO05D010251 2.6e-40 169.1 145 57.2
Sc02g0004890 Simmondsia chinensis HOM05D007912 ORTHO05D010251 2.5e-35 152.5 123 62.6
Sc05g0004290 Simmondsia chinensis HOM05D007912 ORTHO05D010251 3.2e-35 152.1 141 55.3
Sc22g0004270 Simmondsia chinensis HOM05D007912 ORTHO05D010251 2.1e-34 149.4 139 54.0
Sc07g0004870 Simmondsia chinensis HOM05D007912 ORTHO05D010251 3.7e-31 138.7 101 62.4
Sc02g0005760 Simmondsia chinensis HOM05D007912 ORTHO05D010251 1.1e-30 137.1 127 55.9
Sc06g0004280 Simmondsia chinensis HOM05D007912 ORTHO05D010251 5.3e-30 134.8 129 56.6
Sc04g0004730 Simmondsia chinensis HOM05D007912 ORTHO05D010251 9.1e-30 134.0 120 60.8
Sc02g0004930 Simmondsia chinensis HOM05D007912 ORTHO05D010251 1.1e-27 127.1 104 56.7
Sc18g0005300 Simmondsia chinensis HOM05D007912 ORTHO05D010251 1.4e-25 120.2 142 51.4
Sc11g0004200 Simmondsia chinensis HOM05D007912 ORTHO05D010251 1.2e-24 117.1 104 56.7
Sc02g0004480 Simmondsia chinensis HOM05D007912 ORTHO05D010251 2.0e-24 116.3 133 49.6
Sc10g0007100 Simmondsia chinensis HOM05D007912 ORTHO05D010251 4.4e-24 115.2 105 55.2
Sc05g0004710 Simmondsia chinensis HOM05D007912 ORTHO05D010251 2.7e-21 105.9 80 63.8
Sc23g0003790 Simmondsia chinensis HOM05D007912 ORTHO05D010251 2.9e-20 102.4 103 50.5
Sc05g0003960 Simmondsia chinensis HOM05D007912 ORTHO05D010251 1.5e-19 100.1 99 55.6
Sc02g0005270 Simmondsia chinensis HOM05D007912 ORTHO05D010251 2.5e-19 99.4 100 51.0
Sc17g0003150 Simmondsia chinensis HOM05D007912 ORTHO05D010251 2.0e-16 89.7 66 66.7
Sc12g0007100 Simmondsia chinensis HOM05D007912 ORTHO05D010251 9.8e-16 87.4 60 71.7
Sc12g0008170 Simmondsia chinensis HOM05D007912 ORTHO05D010251 2.2e-15 86.3 58 67.2
Sc11g0003920 Simmondsia chinensis HOM05D007912 ORTHO05D010251 6.3e-15 84.7 56 67.9
Sc24g0001130 Simmondsia chinensis HOM05D007912 ORTHO05D010251 2.0e-13 79.7 66 59.1
Sc14g0004880 Simmondsia chinensis HOM05D007912 ORTHO05D010251 4.5e-13 78.6 66 56.1
Sc02g0004810 Simmondsia chinensis HOM05D007912 ORTHO05D010251 1.3e-12 77.0 101 42.6
Sc05g0004480 Simmondsia chinensis HOM05D007912 ORTHO05D010251 2.9e-12 75.9 66 56.1
Sc26g0003020 Simmondsia chinensis HOM05D007912 ORTHO05D010251 2.9e-12 75.9 62 62.9
Sc02g0004860 Simmondsia chinensis HOM05D007912 ORTHO05D010251 2.5e-11 72.8 58 56.9
Sc22g0004420 Simmondsia chinensis HOM05D007912 ORTHO05D010251 5.6e-11 71.6 61 54.1
Sc24g0001190 Simmondsia chinensis HOM05D007912 ORTHO05D010251 3.6e-10 68.9 66 48.5
Sabra13G0012400 Salix brachista HOM05D020966 ORTHO05D010251 6.1e-10 68.2 112 33.0
Sc05g0005690 Simmondsia chinensis HOM05D007912 ORTHO05D010251 8.9e-09 64.3 51 56.9
Sc03g0004300 Simmondsia chinensis HOM05D007912 ORTHO05D010251 4.4e-08 62.0 72 43.1
Sc20g0002780 Simmondsia chinensis HOM05D007912 ORTHO05D010251 5.8e-08 61.6 52 55.8
Sc13g0007430 Simmondsia chinensis HOM05D007912 ORTHO05D010251 1.7e-07 60.1 52 55.8
Sc01g0006550 Simmondsia chinensis HOM05D007912 ORTHO05D010251 2.9e-07 59.3 48 60.4
RcHm_v2.0_Chr7g0194611 Rosa chinensis HOM05D009149 ORTHO05D003639 8.3e-07 57.8 87 35.6
Sc14g0002490 Simmondsia chinensis HOM05D007912 ORTHO05D010251 1.4e-06 57.0 54 50.0
RcHm_v2.0_Chr2g0131351 Rosa chinensis HOM05D009149 ORTHO05D003639 1.9e-06 56.6 89 34.8
RcHm_v2.0_Chr6g0291271 Rosa chinensis HOM05D009149 ORTHO05D003639 1.9e-06 56.6 92 35.9
RcHm_v2.0_Chr2g0105541 Rosa chinensis HOM05D009149 ORTHO05D003639 3.2e-06 55.8 89 34.8
RcHm_v2.0_Chr1g0350201 Rosa chinensis HOM05D009149 ORTHO05D003639 4.1e-06 55.5 89 34.8
RcHm_v2.0_Chr3g0493631 Rosa chinensis HOM05D009149 ORTHO05D003639 7.0e-06 54.7 87 36.8


User provided reference genes

Program Settings