Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sc03g0004560 Simmondsia chinensis HOM05D006933 ORTHO05D009629 1.0e-99 366.7 184 100.0
Sc10g0006330 Simmondsia chinensis HOM05D006933 ORTHO05D009629 2.7e-63 245.7 180 65.6
Sc06g0004220 Simmondsia chinensis HOM05D006933 ORTHO05D009629 6.0e-63 244.6 180 66.1
Sc08g0005340 Simmondsia chinensis HOM05D006933 ORTHO05D009629 6.0e-63 244.6 178 67.4
Sc18g0002450 Simmondsia chinensis HOM05D006933 ORTHO05D009629 1.0e-62 243.8 179 63.7
Sc13g0006150 Simmondsia chinensis HOM05D006933 ORTHO05D009629 9.6e-61 237.3 177 63.3
Sc10g0006470 Simmondsia chinensis HOM05D006933 ORTHO05D009629 2.1e-55 219.5 164 62.2
Sc18g0006260 Simmondsia chinensis HOM05D006933 ORTHO05D009629 4.6e-55 218.4 156 67.3
Sc12g0005710 Simmondsia chinensis HOM05D006933 ORTHO05D009629 1.0e-54 217.2 171 59.1
Sc16g0003440 Simmondsia chinensis HOM05D006933 ORTHO05D009629 7.3e-53 211.1 151 64.9
Sc21g0005420 Simmondsia chinensis HOM05D006933 ORTHO05D009629 3.4e-50 202.2 176 52.3
Sc12g0008540 Simmondsia chinensis HOM05D006933 ORTHO05D009629 9.9e-50 200.7 175 56.6
Sc26g0001380 Simmondsia chinensis HOM05D006933 ORTHO05D009629 9.9e-50 200.7 112 83.9
Sc24g0000790 Simmondsia chinensis HOM05D006933 ORTHO05D009629 1.1e-48 197.2 178 56.7
Sc11g0005090 Simmondsia chinensis HOM05D006933 ORTHO05D009629 1.9e-48 196.4 175 54.9
Sc17g0002170 Simmondsia chinensis HOM05D006933 ORTHO05D009629 3.5e-47 192.2 180 52.8
Sc20g0004170 Simmondsia chinensis HOM05D006933 ORTHO05D009629 6.0e-47 191.4 165 57.6
Sc12g0007420 Simmondsia chinensis HOM05D006933 ORTHO05D009629 8.7e-46 187.6 137 60.6
Sc20g0003680 Simmondsia chinensis HOM05D006933 ORTHO05D009629 3.3e-45 185.7 142 61.3
Sc20g0003570 Simmondsia chinensis HOM05D006933 ORTHO05D009629 1.7e-41 173.3 122 67.2
Sc10g0007390 Simmondsia chinensis HOM05D006933 ORTHO05D009629 1.4e-40 170.2 136 58.1
Sc11g0004570 Simmondsia chinensis HOM05D006933 ORTHO05D009629 3.5e-39 165.6 117 62.4
Sc26g0002540 Simmondsia chinensis HOM05D006933 ORTHO05D009629 2.3e-38 162.9 135 56.3
Sc19g0006300 Simmondsia chinensis HOM05D006933 ORTHO05D009629 9.6e-37 157.5 178 50.0
Sc06g0004410 Simmondsia chinensis HOM05D006933 ORTHO05D009629 2.1e-36 156.4 147 52.4
Sc23g0004060 Simmondsia chinensis HOM05D006933 ORTHO05D009629 2.8e-36 156.0 108 66.7
Sc09g0006400 Simmondsia chinensis HOM05D006933 ORTHO05D009629 5.3e-35 151.8 148 53.4
Sc07g0006510 Simmondsia chinensis HOM05D006933 ORTHO05D009629 2.8e-28 129.4 173 45.1
Sc07g0005650 Simmondsia chinensis HOM05D013278 ORTHO05D009629 1.4e-27 127.1 97 61.9
Sc01g0005690 Simmondsia chinensis HOM05D006933 ORTHO05D009629 1.0e-25 120.9 84 64.3
Sc09g0005800 Simmondsia chinensis HOM05D006933 ORTHO05D009629 2.2e-25 119.8 85 62.4
Sc26g0002220 Simmondsia chinensis HOM05D006933 ORTHO05D009629 2.2e-25 119.8 146 45.9
Sc04g0003720 Simmondsia chinensis HOM05D006933 ORTHO05D009629 1.2e-23 114.0 93 53.8
Sc23g0004170 Simmondsia chinensis HOM05D006933 ORTHO05D009629 1.5e-21 107.1 114 46.5
Sc04g0003670 Simmondsia chinensis HOM05D006933 ORTHO05D009629 9.1e-19 97.8 87 54.0
Sc25g0003910 Simmondsia chinensis HOM05D006933 ORTHO05D009629 3.4e-18 95.9 177 37.3
Sc19g0006270 Simmondsia chinensis HOM05D006933 ORTHO05D009629 1.0e-17 94.4 77 61.0
Sc18g0005120 Simmondsia chinensis HOM05D006933 ORTHO05D009629 1.1e-16 90.9 71 57.7
Sc13g0006290 Simmondsia chinensis HOM05D006933 ORTHO05D009629 3.2e-16 89.4 59 64.4
Sc03g0007280 Simmondsia chinensis HOM05D006933 ORTHO05D009629 4.2e-16 89.0 66 60.6
Sc03g0007270 Simmondsia chinensis HOM05D006933 ORTHO05D009629 7.2e-16 88.2 70 64.3
Sc16g0006020 Simmondsia chinensis HOM05D006933 ORTHO05D009629 2.1e-15 86.7 93 52.7
Sc22g0003620 Simmondsia chinensis HOM05D006933 ORTHO05D009629 6.1e-15 85.1 73 61.6
Sc02g0004050 Simmondsia chinensis HOM05D006933 ORTHO05D009629 1.1e-13 80.9 72 50.0
Sc06g0004260 Simmondsia chinensis HOM05D006933 ORTHO05D009629 5.7e-13 78.6 59 62.7
Sc20g0003530 Simmondsia chinensis HOM05D006933 ORTHO05D009629 5.7e-13 78.6 73 52.1
Sc12g0009480 Simmondsia chinensis HOM05D006933 ORTHO05D009629 3.5e-10 69.3 66 56.1
Sc08g0005990 Simmondsia chinensis HOM05D006933 ORTHO05D009629 5.9e-10 68.6 53 58.5
Sc02g0006620 Simmondsia chinensis HOM05D006933 ORTHO05D009629 2.9e-09 66.2 60 53.3
Sc12g0008830 Simmondsia chinensis HOM05D006933 ORTHO05D009629 1.5e-08 63.9 66 54.5
Rhsim05G0113800 Rhododendron simsii HOM05D010265 ORTHO05D009356 9.4e-08 61.2 151 29.1
vmacro12106 Vaccinium macrocarpon HOM05D000081 ORTHO05D009356 2.7e-07 59.7 121 33.1
TPR.G18402 Trifolium pratense HOM05D002777 ORTHO05D001516 3.6e-07 59.3 147 27.2
Medtr2g103400 Medicago truncatula HOM05D002777 ORTHO05D001516 1.4e-06 57.4 85 28.2
Sc07g0002530 Simmondsia chinensis HOM05D011136 ORTHO05D010856 1.4e-06 57.4 64 40.6
Psat5g175040 Pisum sativum HOM05D007807 ORTHO05D001516 1.8e-06 57.0 103 27.2
Rhsim09G0140400 Rhododendron simsii HOM05D008219 ORTHO05D009356 1.8e-06 57.0 109 33.0
Rhsim10G0135400 Rhododendron simsii HOM05D001175 ORTHO05D003291 1.8e-06 57.0 99 30.3
vmacro00512 Vaccinium macrocarpon HOM05D008219 ORTHO05D009356 1.8e-06 57.0 96 32.3
Actinidia34556 Actinidia chinensis HOM05D008219 ORTHO05D009356 4.0e-06 55.8 87 28.7
Ah.01g013230 Amaranthus hybridus HOM05D008762 ORTHO05D011252 6.7e-06 55.1 111 31.5
Sc03g0004550 Simmondsia chinensis HOM05D009209 ORTHO05D011705 6.7e-06 55.1 90 25.6
vmacro06592 Vaccinium macrocarpon HOM05D000211 ORTHO05D002285 6.7e-06 55.1 91 35.2
vmacro21908 Vaccinium macrocarpon HOM05D008219 ORTHO05D009356 6.7e-06 55.1 120 25.0
Actinidia26692 Actinidia chinensis HOM05D008219 ORTHO05D009356 8.8e-06 54.7 80 36.2
Ah.03g144970 Amaranthus hybridus HOM05D008762 ORTHO05D011252 8.8e-06 54.7 97 33.0
Lj2g0009989 Lotus japonicus HOM05D008220 ORTHO05D010358 8.8e-06 54.7 78 32.1


User provided reference genes

Program Settings