Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sc03g0004300 Simmondsia chinensis HOM05D007912 ORTHO05D010251 5.7e-175 617.5 306 100.0
Sc17g0003260 Simmondsia chinensis HOM05D007912 ORTHO05D010251 2.5e-37 160.2 136 56.6
Sc05g0005690 Simmondsia chinensis HOM05D007912 ORTHO05D010251 2.4e-32 143.7 120 66.7
Sc17g0003520 Simmondsia chinensis HOM05D007912 ORTHO05D010251 4.1e-32 142.9 105 68.6
Sc12g0007100 Simmondsia chinensis HOM05D007912 ORTHO05D010251 5.3e-32 142.5 119 61.3
Sc13g0007430 Simmondsia chinensis HOM05D007912 ORTHO05D010251 3.5e-31 139.8 112 62.5
Sc14g0002490 Simmondsia chinensis HOM05D007912 ORTHO05D010251 7.7e-31 138.7 112 66.1
Sc24g0001190 Simmondsia chinensis HOM05D007912 ORTHO05D010251 5.0e-30 136.0 120 58.3
Sc24g0001130 Simmondsia chinensis HOM05D007912 ORTHO05D010251 2.5e-29 133.7 120 58.3
Sc23g0003790 Simmondsia chinensis HOM05D007912 ORTHO05D010251 4.2e-29 132.9 135 55.6
Sc02g0004970 Simmondsia chinensis HOM05D007912 ORTHO05D010251 7.2e-29 132.1 112 61.6
Sc07g0004510 Simmondsia chinensis HOM05D007912 ORTHO05D010251 2.7e-28 130.2 110 65.5
Sc11g0004150 Simmondsia chinensis HOM05D007912 ORTHO05D010251 2.7e-28 130.2 98 68.4
Sc06g0004250 Simmondsia chinensis HOM05D007912 ORTHO05D010251 1.8e-27 127.5 112 60.7
Sc08g0005440 Simmondsia chinensis HOM05D007912 ORTHO05D010251 4.0e-27 126.3 103 65.0
Sc01g0005460 Simmondsia chinensis HOM05D007912 ORTHO05D010251 1.5e-26 124.4 98 65.3
Sc05g0004480 Simmondsia chinensis HOM05D007912 ORTHO05D010251 9.8e-26 121.7 115 58.3
Sc15g0002320 Simmondsia chinensis HOM05D007912 ORTHO05D010251 3.7e-25 119.8 91 68.1
Sc02g0004890 Simmondsia chinensis HOM05D007912 ORTHO05D010251 6.3e-25 119.0 90 68.9
Sc03g0005210 Simmondsia chinensis HOM05D007912 ORTHO05D010251 8.3e-25 118.6 120 47.5
Sc13g0008210 Simmondsia chinensis HOM05D007912 ORTHO05D010251 8.3e-25 118.6 89 68.5
Sc22g0004270 Simmondsia chinensis HOM05D007912 ORTHO05D010251 1.4e-24 117.9 93 62.4
Sc14g0004880 Simmondsia chinensis HOM05D007912 ORTHO05D010251 1.8e-24 117.5 88 68.2
Sc22g0004320 Simmondsia chinensis HOM05D007912 ORTHO05D010251 3.1e-24 116.7 105 60.0
Sc02g0005760 Simmondsia chinensis HOM05D007912 ORTHO05D010251 9.1e-24 115.2 90 64.4
Sc17g0003130 Simmondsia chinensis HOM05D007912 ORTHO05D010251 9.1e-24 115.2 110 54.5
Sc21g0003860 Simmondsia chinensis HOM05D007912 ORTHO05D010251 1.2e-23 114.8 118 54.2
Sc02g0004980 Simmondsia chinensis HOM05D007912 ORTHO05D010251 7.7e-23 112.1 90 64.4
Sc24g0001220 Simmondsia chinensis HOM05D007912 ORTHO05D010251 1.1e-21 108.2 100 62.0
Sc18g0005300 Simmondsia chinensis HOM05D007912 ORTHO05D010251 1.5e-21 107.8 102 55.9
Sc22g0004420 Simmondsia chinensis HOM05D007912 ORTHO05D010251 1.9e-21 107.5 90 62.2
Sc26g0003020 Simmondsia chinensis HOM05D007912 ORTHO05D010251 5.5e-21 105.9 90 60.0
Sc01g0006550 Simmondsia chinensis HOM05D007912 ORTHO05D010251 1.6e-20 104.4 108 54.6
Sc20g0002780 Simmondsia chinensis HOM05D007912 ORTHO05D010251 2.1e-20 104.0 82 67.1
Sc04g0004840 Simmondsia chinensis HOM05D007912 ORTHO05D010251 6.1e-20 102.4 200 37.0
Sc02g0004810 Simmondsia chinensis HOM05D007912 ORTHO05D010251 4.0e-19 99.8 103 52.4
Sc05g0003960 Simmondsia chinensis HOM05D007912 ORTHO05D010251 1.2e-18 98.2 60 73.3
Sc08g0004760 Simmondsia chinensis HOM05D007912 ORTHO05D010251 1.2e-18 98.2 67 71.6
Sc02g0004480 Simmondsia chinensis HOM05D007912 ORTHO05D010251 2.6e-18 97.1 70 68.6
Sc05g0005050 Simmondsia chinensis HOM05D007912 ORTHO05D010251 2.6e-18 97.1 74 66.2
Sc17g0003150 Simmondsia chinensis HOM05D007912 ORTHO05D010251 2.6e-18 97.1 105 50.5
Sc02g0005270 Simmondsia chinensis HOM05D007912 ORTHO05D010251 2.2e-17 94.0 90 57.8
Sc01g0006390 Simmondsia chinensis HOM05D007912 ORTHO05D010251 3.1e-16 90.1 68 64.7
Sc10g0007130 Simmondsia chinensis HOM05D007912 ORTHO05D010251 5.9e-15 85.9 66 68.2
Sc17g0002860 Simmondsia chinensis HOM05D007912 ORTHO05D010251 7.7e-15 85.5 62 71.0
Sc05g0004430 Simmondsia chinensis HOM05D007912 ORTHO05D010251 2.1e-12 77.4 66 66.7
Sc01g0006690 Simmondsia chinensis HOM05D007912 ORTHO05D010251 3.6e-12 76.6 65 58.5
Sc07g0005080 Simmondsia chinensis HOM05D007912 ORTHO05D010251 8.0e-12 75.5 69 59.4
Sc10g0007340 Simmondsia chinensis HOM05D007912 ORTHO05D010251 5.2e-11 72.8 56 60.7
Sc08g0005480 Simmondsia chinensis HOM05D007912 ORTHO05D010251 8.9e-11 72.0 53 62.3
Sc17g0003650 Simmondsia chinensis HOM05D007912 ORTHO05D010251 4.4e-10 69.7 73 49.3
Sabra13G0012400 Salix brachista HOM05D020966 ORTHO05D010251 2.2e-09 67.4 67 49.3
Sc12g0008150 Simmondsia chinensis HOM05D007912 ORTHO05D010251 1.4e-08 64.7 55 61.8
Sc05g0004290 Simmondsia chinensis HOM05D007912 ORTHO05D010251 3.2e-08 63.5 84 41.7
Sc03g0005380 Simmondsia chinensis HOM05D007912 ORTHO05D010251 5.4e-08 62.8 61 50.8
Nitab4.5_0006587g0010 Nicotiana tabacum HOM05D008778 ORTHO05D003639 9.2e-08 62.0 280 24.6
Sc03g0004870 Simmondsia chinensis HOM05D007912 ORTHO05D010251 2.0e-07 60.8 72 43.1
Sc02g0004160 Simmondsia chinensis HOM05D007912 ORTHO05D010251 3.5e-07 60.1 53 58.5
Sc04g0004730 Simmondsia chinensis HOM05D007912 ORTHO05D010251 3.5e-07 60.1 65 47.7
Sc11g0004200 Simmondsia chinensis HOM05D007912 ORTHO05D010251 1.3e-06 58.2 65 43.1
Sc05g0004680 Simmondsia chinensis HOM05D007912 ORTHO05D010251 2.3e-06 57.4 61 54.1
COL.COLO4_04628 Corchorus olitorius HOM05D015644 ORTHO05D016958 2.9e-06 57.0 308 22.7
Sc24g0001000 Simmondsia chinensis HOM05D003009 ORTHO05D001701 3.9e-06 56.6 103 37.9
FvH4_1g21382 Fragaria vesca HOM05D016497 ORTHO05D019154 8.6e-06 55.5 320 22.5


User provided reference genes

Program Settings