Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sc03g0003740 Simmondsia chinensis HOM05D006610 ORTHO05D008447 2.0e-74 282.3 143 100.0
Sabra05G0089400 Salix brachista HOM05D006610 ORTHO05D008447 2.0e-42 176.0 156 60.9
Duzib187G1817 Durio zibethinus HOM05D006610 ORTHO05D008447 3.8e-41 171.8 149 67.1
TAR186G0001 Trochodendron aralioides HOM05D006610 ORTHO05D008447 5.0e-41 171.4 143 65.7
CSS0043605 Camellia sinensis var. sinensis HOM05D006610 ORTHO05D008447 1.1e-40 170.2 147 65.3
Thecc.01G013000 Theobroma cacao HOM05D006610 ORTHO05D008447 1.1e-40 170.2 148 64.2
Haze_03713 Corylus avellana HOM05D006610 ORTHO05D008447 4.2e-40 168.3 146 66.4
Manes.02G109300 Manihot esculenta HOM05D006610 ORTHO05D008447 9.5e-40 167.2 152 59.9
Phvul.003G266300 Phaseolus vulgaris HOM05D006610 ORTHO05D008447 1.6e-39 166.4 144 62.5
Hma1.2p1_0315F.1_g122440 Hydrangea macrophylla HOM05D006610 ORTHO05D008447 2.1e-39 166.0 145 66.2
Potri.005G109100 Populus trichocarpa HOM05D006610 ORTHO05D008447 2.8e-39 165.6 155 59.4
COL.COLO4_22482 Corchorus olitorius HOM05D006610 ORTHO05D008447 1.0e-38 163.7 152 63.2
VMungo0251G0375 Vigna mungo HOM05D006610 ORTHO05D008447 1.4e-38 163.3 144 62.5
Gohir.D03G006400 Gossypium hirsutum HOM05D006610 ORTHO05D008447 2.3e-38 162.5 150 62.0
Hund16514 Selenicereus undatus HOM05D006610 ORTHO05D008447 5.2e-38 161.4 139 63.3
GSVIVG01007223001 Vitis vinifera HOM05D006610 ORTHO05D008447 5.2e-38 161.4 148 62.2
Actinidia28724 Actinidia chinensis HOM05D006610 ORTHO05D008447 8.9e-38 160.6 144 63.2
Cpa.g.sc6.302 Carica papaya HOM05D006610 ORTHO05D008447 1.2e-37 160.2 147 61.9
Ciclev10026475m.g Citrus clementina HOM05D006610 ORTHO05D008447 1.5e-37 159.8 148 62.2
Gorai.003G006700 Gossypium raimondii HOM05D006610 ORTHO05D008447 1.5e-37 159.8 150 62.0
TWI09G0665 Tripterygium wilfordii HOM05D006610 ORTHO05D008447 2.0e-37 159.5 152 61.2
Atru.chr3.883 Acer truncatum HOM05D006610 ORTHO05D008447 2.6e-37 159.1 144 61.1
Atru.chr3.894 Acer truncatum HOM05D006610 ORTHO05D008447 2.6e-37 159.1 144 61.1
Nn5g30811 Nelumbo nucifera HOM05D006610 ORTHO05D008447 7.5e-37 157.5 156 59.6
Cfa007018 Carpinus fangiana HOM05D006610 ORTHO05D008447 9.8e-37 157.1 168 57.7
Gohir.A02G173500 Gossypium hirsutum HOM05D006610 ORTHO05D008447 1.3e-36 156.8 148 62.2
arahy.Tifrunner.gnm1.ann1.UN150X Arachis hypogaea HOM05D006610 ORTHO05D008447 1.7e-36 156.4 146 60.3
PGR119G0279 Punica granatum HOM05D006610 ORTHO05D008447 1.7e-36 156.4 163 58.3
Glyma.16G123000 Glycine max HOM05D006610 ORTHO05D008447 2.2e-36 156.0 152 61.2
EL10Ac6g15167 Beta vulgaris HOM05D006610 ORTHO05D008447 6.3e-36 154.5 136 62.5
Gohir.A11G172600 Gossypium hirsutum HOM05D006610 ORTHO05D008447 1.1e-35 153.7 149 60.4
Nitab4.5_0008552g0010 Nicotiana tabacum HOM05D006610 ORTHO05D008447 1.8e-35 152.9 149 58.4
PGSC0003DMG400003653 Solanum tuberosum HOM05D006610 ORTHO05D008447 2.4e-35 152.5 145 60.7
Rhsim08G0031200 Rhododendron simsii HOM05D006610 ORTHO05D008447 3.1e-35 152.1 168 56.5
CAN.G890.6 Capsicum annuum HOM05D006610 ORTHO05D008447 7.0e-35 151.0 146 58.2
FAN28G2812 Fragaria x ananassa HOM05D006610 ORTHO05D008447 7.0e-35 151.0 150 58.0
Sopen02g028290 Solanum pennellii HOM05D006610 ORTHO05D008447 9.2e-35 150.6 145 59.3
CSS0036095 Camellia sinensis var. sinensis HOM05D006610 ORTHO05D008447 2.7e-34 149.1 147 59.2
Lj4g0021807 Lotus japonicus HOM05D006610 ORTHO05D008447 2.7e-34 149.1 148 58.1
Lalb_Chr16g0391471 Lupinus albus HOM05D006610 ORTHO05D008447 2.7e-34 149.1 144 56.9
Solyc02g083500.3 Solanum lycopersicum HOM05D006610 ORTHO05D008447 2.7e-34 149.1 145 59.3
AUR62018012 Chenopodium quinoa HOM05D006610 ORTHO05D008447 3.5e-34 148.7 134 63.4
FAN19G1298 Fragaria x ananassa HOM05D006610 ORTHO05D008447 1.0e-33 147.1 152 59.2
Nitab4.5_0001789g0060 Nicotiana tabacum HOM05D006610 ORTHO05D008447 1.0e-33 147.1 153 56.2
arahy.Tifrunner.gnm1.ann1.M7YZEH Arachis hypogaea HOM05D006610 ORTHO05D008447 1.3e-33 146.7 146 58.9
FvH4_1g11240 Fragaria vesca HOM05D006610 ORTHO05D008447 1.3e-33 146.7 152 59.2
DCAR_014043 Daucus carota HOM05D006610 ORTHO05D008447 1.7e-33 146.4 154 56.5
CDE09G0967 Ceratophyllum demersum HOM05D006610 ORTHO05D008447 2.3e-33 146.0 137 61.3
Lsat_1_v5_gn_3_71540 Lactuca sativa HOM05D006610 ORTHO05D008447 5.0e-33 144.8 150 59.3
Cc07_g11190 Coffea canephora HOM05D006610 ORTHO05D008447 6.6e-33 144.4 151 57.6
AUR62003705 Chenopodium quinoa HOM05D006610 ORTHO05D008447 1.1e-32 143.7 90 78.9
Eucgr.I02316 Eucalyptus grandis HOM05D006610 ORTHO05D008447 1.1e-32 143.7 151 55.6
RcHm_v2.0_Chr2g0098651 Rosa chinensis HOM05D006610 ORTHO05D008447 1.9e-32 142.9 149 57.7
HanXRQChr16g0531751 Helianthus annuus HOM05D006610 ORTHO05D008447 3.3e-32 142.1 122 62.3
Lsat_1_v5_gn_2_20941 Lactuca sativa HOM05D006610 ORTHO05D008447 3.3e-32 142.1 150 56.0
Prupe.7G173500 Prunus persica HOM05D006610 ORTHO05D008447 5.6e-32 141.4 151 53.0
vmacro18433 Vaccinium macrocarpon HOM05D006610 ORTHO05D008447 7.3e-32 141.0 84 81.0
ECA246G3062 Erigeron canadensis HOM05D006610 ORTHO05D008447 9.5e-32 140.6 145 60.0
Lj4A224G29 Lonicera japonica HOM05D006610 ORTHO05D008447 1.6e-31 139.8 96 72.9
CANSAT01G0612 Cannabis sativa HOM05D006610 ORTHO05D008447 2.1e-31 139.4 147 55.8
CDE02G2830 Ceratophyllum demersum HOM05D006610 ORTHO05D008447 2.1e-31 139.4 130 60.8
Gorai.007G191500 Gossypium raimondii HOM05D006610 ORTHO05D008447 2.1e-31 139.4 139 59.7
Psat4g102280 Pisum sativum HOM05D006610 ORTHO05D008447 2.1e-31 139.4 148 57.4
FAN26G1933 Fragaria x ananassa HOM05D006610 ORTHO05D008447 3.6e-31 138.7 146 56.8
MD02G1124800 Malus domestica HOM05D006610 ORTHO05D008447 8.0e-31 137.5 153 52.9
Peaxi162Scf00328g00315 Petunia axillaris HOM05D006610 ORTHO05D008447 8.0e-31 137.5 80 82.5
Sed0015497 Sechium edule HOM05D006610 ORTHO05D008447 8.0e-31 137.5 153 52.3
SGA_v2.0_scaffold49G18127 Striga asiatica HOM05D006610 ORTHO05D008447 1.4e-30 136.7 144 52.8
THA.LOC104821342 Tarenaya hassleriana HOM05D006610 ORTHO05D008447 1.4e-30 136.7 143 53.1
CsaV3_3G000580 Cucumis sativus L. HOM05D006610 ORTHO05D008447 1.8e-30 136.3 152 53.9
PSO170G5432 Papaver somniferum HOM05D006610 ORTHO05D008447 4.0e-30 135.2 84 78.6
THA.LOC104819168 Tarenaya hassleriana HOM05D006610 ORTHO05D008447 5.2e-30 134.8 146 52.7
Sp2g30600 Schrenkiella parvula HOM05D006610 ORTHO05D008447 1.2e-29 133.7 143 53.8
AUR62034480 Chenopodium quinoa HOM05D006610 ORTHO05D008447 2.0e-29 132.9 73 87.7
Aqoxy6G02108 Aquilegia oxysepala HOM05D006610 ORTHO05D008447 3.4e-29 132.1 111 67.6
Medtr8g075110 Medicago truncatula HOM05D006610 ORTHO05D008447 3.4e-29 132.1 146 54.8
MSTRG.15312 Avicennia marina HOM05D006610 ORTHO05D008447 4.4e-29 131.7 126 56.3
FAN23G0795 Fragaria x ananassa HOM05D006610 ORTHO05D008447 4.4e-29 131.7 147 55.8
TPR.G19505 Trifolium pratense HOM05D006610 ORTHO05D008447 7.5e-29 131.0 139 56.8
HPP92_025898 Vanilla planifolia HOM05D006610 ORTHO05D008447 7.5e-29 131.0 143 55.2
ATR0180G027 Amborella trichopoda HOM05D006610 ORTHO05D008447 2.2e-28 129.4 84 73.8
Nn6g31943 Nelumbo nucifera HOM05D006610 ORTHO05D008447 2.2e-28 129.4 143 55.2
Os09g0541700 Oryza sativa ssp. japonica HOM05D006610 ORTHO05D008447 2.2e-28 129.4 143 52.4
MELO3C013747.2 Cucumis melo HOM05D006610 ORTHO05D008447 4.9e-28 128.3 148 52.7
SalBow3G0548 Salvia bowleyana HOM05D006610 ORTHO05D008447 1.8e-27 126.3 133 54.1
Gohir.D11G179450 Gossypium hirsutum HOM05D006610 ORTHO05D008447 4.1e-27 125.2 81 76.5
Duzib147G1005 Durio zibethinus HOM05D006610 ORTHO05D008447 2.7e-26 122.5 126 61.1
SalBow3G0370 Salvia bowleyana HOM05D006610 ORTHO05D008447 1.0e-25 120.6 85 67.1
Migut.H00253 Erythranthe guttata HOM05D006610 ORTHO05D008447 1.3e-25 120.2 143 49.0
AL8G45500 Arabidopsis lyrata HOM05D006610 ORTHO05D008447 5.0e-25 118.2 86 66.3
Carub.0008s2842 Capsella rubella HOM05D006610 ORTHO05D008447 5.0e-25 118.2 145 51.7
Thhalv10004913m.g Eutrema salsugineum HOM05D006610 ORTHO05D008447 1.1e-24 117.1 146 48.6
AT5G66090 Arabidopsis thaliana HOM05D006610 ORTHO05D008447 4.3e-24 115.2 147 49.0
A02p44620 Brassica napus HOM05D006610 ORTHO05D008447 1.2e-23 113.6 145 49.0
BraA02t09378Z Brassica rapa HOM05D006610 ORTHO05D008447 1.2e-23 113.6 145 49.0
BolC2t12560H Brassica oleracea HOM05D006610 ORTHO05D008447 2.8e-23 112.5 152 50.0
MBI05_g19586_MAGBIO Magnolia biondii HOM05D006610 ORTHO05D008447 8.0e-23 110.9 63 81.0
AagrBONN_evm.TU.Sc2ySwM_369.589 Anthoceros agrestis HOM05D006610 ORTHO05D008447 3.1e-22 109.0 78 66.7
CARHR281660 Cardamine hirsuta HOM05D006610 ORTHO05D008447 5.2e-22 108.2 148 47.3
AUR62018013 Chenopodium quinoa HOM05D006610 ORTHO05D008447 2.6e-21 105.9 134 49.3
Pp3c9_6630 Physcomitrium patens HOM05D006610 ORTHO05D008447 5.8e-21 104.8 91 57.1
SEGI_37776 Sequoiadendron giganteum HOM05D006610 ORTHO05D008447 2.2e-20 102.8 113 45.1
Aa31LG1G14570 Aethionema arabicum HOM05D006610 ORTHO05D008447 6.4e-20 101.3 131 47.3
ClCG10G000510 Citrullus lanatus HOM05D006610 ORTHO05D008447 8.3e-20 100.9 159 42.8
unitig_736.g22562 Utricularia gibba HOM05D006610 ORTHO05D008447 1.1e-19 100.5 100 52.0
QL06p051391 Quercus lobata HOM05D006610 ORTHO05D008447 2.4e-19 99.4 99 58.6
SMO361G0750 Selaginella moellendorffii HOM05D004797 ORTHO05D005752 7.3e-16 87.8 66 63.6
Solyc02g083525.1 Solanum lycopersicum HOM05D006610 ORTHO05D008447 2.0e-13 79.7 46 80.4
QL06p051388 Quercus lobata HOM05D006610 ORTHO05D008447 5.8e-13 78.2 45 82.2
Oeu000676.1 Olea europaea HOM05D006610 ORTHO05D008447 6.4e-12 74.7 43 83.7
Hma1.2p1_3766F.1_g337520 Hydrangea macrophylla HOM05D006610 ORTHO05D008447 6.0e-10 68.2 45 73.3
Cre15.g638400 Chlamydomonas reinhardtii HOM05D006610 ORTHO05D008447 8.6e-09 64.3 91 38.5
Zm00001eb331770 Zea mays HOM05D006610 ORTHO05D008447 1.1e-06 57.4 100 43.0
HPP92_025903 Vanilla planifolia HOM05D006610 ORTHO05D008447 3.1e-06 55.8 37 67.6


User provided reference genes

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