Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sc03g0002320 Simmondsia chinensis HOM05D004921 ORTHO05D006008 0.0e+00 1143.3 655 100.0
Hund13647 Selenicereus undatus HOM05D004921 ORTHO05D006008 5.3e-162 575.5 679 57.4
TAR381G0204 Trochodendron aralioides HOM05D004921 ORTHO05D006008 2.2e-152 543.5 672 51.0
TAR381G1578 Trochodendron aralioides HOM05D004921 ORTHO05D006008 1.0e-149 534.6 678 50.4
EL10Ac6g15063 Beta vulgaris HOM05D004921 ORTHO05D006008 1.1e-146 524.6 673 52.9
AUR62003756 Chenopodium quinoa HOM05D004921 ORTHO05D006008 6.5e-144 515.4 648 52.8
AUR62002041 Chenopodium quinoa HOM05D004921 ORTHO05D006008 1.4e-141 507.7 653 51.6
GSVIVG01022188001 Vitis vinifera HOM05D004921 ORTHO05D006008 5.1e-141 505.8 684 51.6
Actinidia36610 Actinidia chinensis HOM05D004921 ORTHO05D006008 2.9e-136 490.0 656 48.9
Nn5g28998 Nelumbo nucifera HOM05D004921 ORTHO05D006008 1.0e-133 481.5 669 48.0
HanXRQChr02g0041141 Helianthus annuus HOM05D004921 ORTHO05D006008 1.4e-133 481.1 669 51.7
Duzib147G0642 Durio zibethinus HOM05D004921 ORTHO05D006008 5.1e-133 479.2 668 48.1
COL.COLO4_11048 Corchorus olitorius HOM05D004921 ORTHO05D006008 7.4e-132 475.3 693 49.4
PGR004G1500 Punica granatum HOM05D004921 ORTHO05D006008 7.4e-132 475.3 653 50.5
Gohir.D11G225200 Gossypium hirsutum HOM05D004921 ORTHO05D006008 9.7e-132 474.9 695 45.9
Gorai.007G242500 Gossypium raimondii HOM05D004921 ORTHO05D006008 2.8e-131 473.4 695 45.9
CANSAT01G2911 Cannabis sativa HOM05D004921 ORTHO05D006008 8.2e-131 471.9 675 50.4
Gohir.A11G198900 Gossypium hirsutum HOM05D004921 ORTHO05D006008 1.1e-130 471.5 668 47.5
Rhsim10G0156300 Rhododendron simsii HOM05D004921 ORTHO05D006008 1.1e-130 471.5 677 46.5
MSTRG.2547 Avicennia marina HOM05D004921 ORTHO05D006008 3.1e-130 469.9 668 49.7
Thecc.01G107800 Theobroma cacao HOM05D004921 ORTHO05D006008 3.1e-130 469.9 689 47.6
Atru.chr4.263 Acer truncatum HOM05D004921 ORTHO05D006008 4.1e-130 469.5 658 48.2
QL06p050536 Quercus lobata HOM05D004921 ORTHO05D006008 2.5e-127 460.3 662 49.2
MD01G1023900 Malus domestica HOM05D004921 ORTHO05D006008 5.5e-127 459.1 665 46.0
Sopen04g024290 Solanum pennellii HOM05D004921 ORTHO05D006008 2.1e-126 457.2 655 45.8
Prupe.6G178900 Prunus persica HOM05D004921 ORTHO05D006008 6.1e-126 455.7 665 47.4
TWI53G0980 Tripterygium wilfordii HOM05D004921 ORTHO05D006008 1.4e-125 454.5 695 46.2
Eucgr.I00377 Eucalyptus grandis HOM05D004921 ORTHO05D006008 2.3e-125 453.8 676 45.4
Ciclev10025222m.g Citrus clementina HOM05D004921 ORTHO05D006008 3.0e-125 453.4 655 48.2
ECA246G4277 Erigeron canadensis HOM05D004921 ORTHO05D006008 3.3e-124 449.9 664 49.1
Nitab4.5_0001095g0090 Nicotiana tabacum HOM05D004921 ORTHO05D006008 9.7e-124 448.4 676 46.4
Potri.005G080200 Populus trichocarpa HOM05D004921 ORTHO05D006008 1.7e-123 447.6 675 46.1
Ah.03g142660 Amaranthus hybridus HOM05D004921 ORTHO05D006008 8.2e-123 445.3 622 50.8
Lalb_Chr13g0296081 Lupinus albus HOM05D004921 ORTHO05D006008 1.1e-122 444.9 670 47.3
MELO3C007782.2 Cucumis melo HOM05D004921 ORTHO05D006008 2.4e-122 443.7 673 45.9
RcHm_v2.0_Chr2g0115541 Rosa chinensis HOM05D004921 ORTHO05D006008 5.3e-122 442.6 679 45.8
Manes.12G138700 Manihot esculenta HOM05D004921 ORTHO05D006008 9.1e-122 441.8 685 44.2
Sed0006076 Sechium edule HOM05D004921 ORTHO05D006008 9.1e-122 441.8 693 44.9
Potri.007G087100 Populus trichocarpa HOM05D004921 ORTHO05D006008 2.7e-121 440.3 679 44.0
Duzib187G0704 Durio zibethinus HOM05D004921 ORTHO05D006008 7.7e-121 438.7 716 44.6
Gohir.D12G094600 Gossypium hirsutum HOM05D004921 ORTHO05D006008 1.0e-120 438.3 663 45.9
Glyma.05G181700 Glycine max HOM05D004921 ORTHO05D006008 1.7e-120 437.6 669 48.9
CiPaw.03G138100 Carya illinoinensis HOM05D004921 ORTHO05D006008 2.2e-120 437.2 489 54.6
Gorai.008G103200 Gossypium raimondii HOM05D004921 ORTHO05D006008 8.5e-120 435.3 663 45.9
Dinv21950 Davidia involucrata HOM05D004921 ORTHO05D006008 3.2e-119 433.3 336 71.7
SGA_v2.0_scaffold51G18730 Striga asiatica HOM05D004921 ORTHO05D006008 2.7e-118 430.3 635 45.2
Lj4A880G51 Lonicera japonica HOM05D004921 ORTHO05D006008 6.1e-118 429.1 656 47.0
THA.LOC104807708 Tarenaya hassleriana HOM05D004921 ORTHO05D006008 8.0e-118 428.7 669 44.1
AT4G39690 Arabidopsis thaliana HOM05D004921 ORTHO05D006008 1.0e-117 428.3 674 45.3
MSTRG.23325 Avicennia marina HOM05D004921 ORTHO05D006008 1.8e-117 427.6 374 63.4
CsaV3_6G045720 Cucumis sativus L. HOM05D004921 ORTHO05D006008 1.8e-117 427.6 673 44.7
TPR.G2186 Trifolium pratense HOM05D004921 ORTHO05D006008 3.0e-117 426.8 664 42.5
Lalb_Chr07g0184941 Lupinus albus HOM05D004921 ORTHO05D006008 5.2e-117 426.0 671 46.2
Hma1.2p1_0070F.1_g037680 Hydrangea macrophylla HOM05D004921 ORTHO05D006008 6.8e-117 425.6 334 72.8
Migut.H02393 Erythranthe guttata HOM05D004921 ORTHO05D006008 1.5e-116 424.5 678 43.2
Lsat_1_v5_gn_5_40701 Lactuca sativa HOM05D004921 ORTHO05D006008 2.0e-116 424.1 621 45.9
Thhalv10024641m.g Eutrema salsugineum HOM05D004921 ORTHO05D006008 5.4e-114 416.0 675 43.4
arahy.Tifrunner.gnm1.ann1.WRB6NJ Arachis hypogaea HOM05D004921 ORTHO05D006008 3.5e-113 413.3 681 45.7
Psat7g053360 Pisum sativum HOM05D004921 ORTHO05D006008 5.9e-113 412.5 684 45.3
Sp7g36200 Schrenkiella parvula HOM05D004921 ORTHO05D006008 7.7e-113 412.1 687 43.7
CARHR247030 Cardamine hirsuta HOM05D004921 ORTHO05D006008 1.7e-112 411.0 687 44.1
Phvul.002G262700 Phaseolus vulgaris HOM05D004921 ORTHO05D006008 6.5e-112 409.1 669 46.2
AL7G11890 Arabidopsis lyrata HOM05D004921 ORTHO05D006008 1.5e-111 407.9 679 46.7
Aqoxy6G00539 Aquilegia oxysepala HOM05D004921 ORTHO05D006008 5.5e-111 406.0 697 42.0
Carub.0007s0157 Capsella rubella HOM05D004921 ORTHO05D006008 9.5e-111 405.2 682 42.8
C03p78130 Brassica napus HOM05D004921 ORTHO05D006008 1.2e-110 404.8 657 44.4
Lj4g0017071 Lotus japonicus HOM05D004921 ORTHO05D006008 1.2e-110 404.8 724 43.9
BolC3t20076H Brassica oleracea HOM05D004921 ORTHO05D006008 2.3e-109 400.6 671 43.7
PSO133G0077 Papaver somniferum HOM05D004921 ORTHO05D006008 2.3e-109 400.6 686 42.9
BcaC01g00311 Brassica carinata HOM05D004921 ORTHO05D006008 6.8e-109 399.1 673 43.2
Medtr8g091480 Medicago truncatula HOM05D004921 ORTHO05D006008 2.0e-108 397.5 667 46.6
PSO541G2636 Papaver somniferum HOM05D004921 ORTHO05D006008 4.4e-108 396.4 686 42.6
Haze_24997 Corylus avellana HOM05D004921 ORTHO05D006008 5.7e-108 396.0 684 43.7
VMungo0251G2130 Vigna mungo HOM05D004921 ORTHO05D006008 9.8e-108 395.2 667 46.0
Glyma.08G139400 Glycine max HOM05D004921 ORTHO05D006008 2.2e-107 394.0 682 41.9
Peaxi162Scf00204g00620 Petunia axillaris HOM05D004921 ORTHO05D006008 2.8e-107 393.7 644 42.4
BcaB03g12266 Brassica carinata HOM05D004921 ORTHO05D006008 9.2e-106 388.7 676 42.3
arahy.Tifrunner.gnm1.ann1.P05418 Arachis hypogaea HOM05D004921 ORTHO05D006008 4.5e-105 386.3 709 43.3
A08p23440 Brassica napus HOM05D004921 ORTHO05D006008 5.9e-105 386.0 697 41.3
ClCG01G019030 Citrullus lanatus HOM05D004921 ORTHO05D006008 1.9e-103 380.9 647 42.0
FAN19G2080 Fragaria x ananassa HOM05D004921 ORTHO05D006008 2.5e-103 380.6 677 44.9
ATR0661G561 Amborella trichopoda HOM05D004921 ORTHO05D006008 4.3e-103 379.8 627 42.4
FvH4_1g21670 Fragaria vesca HOM05D004921 ORTHO05D006008 4.3e-103 379.8 667 45.3
BraA08t34298Z Brassica rapa HOM05D004921 ORTHO05D006008 5.6e-103 379.4 674 41.4
Gohir.A12G091122 Gossypium hirsutum HOM05D004921 ORTHO05D006008 8.0e-102 375.6 689 41.1
MBI05_g00773_MAGBIO Magnolia biondii HOM05D004921 ORTHO05D006008 1.4e-101 374.8 666 43.2
Sabra05G0065800 Salix brachista HOM05D004921 ORTHO05D006008 5.7e-100 369.4 736 38.7
FAN26G3387 Fragaria x ananassa HOM05D004921 ORTHO05D006008 7.5e-100 369.0 602 46.3
FAN26G3332 Fragaria x ananassa HOM05D004921 ORTHO05D006008 1.7e-99 367.9 680 43.8
FAN28G0310 Fragaria x ananassa HOM05D004921 ORTHO05D006008 5.4e-98 362.8 681 43.3
FAN23G2445 Fragaria x ananassa HOM05D004921 ORTHO05D006008 1.2e-97 361.7 693 43.4
vmacro12934 Vaccinium macrocarpon HOM05D004921 ORTHO05D006008 8.6e-96 355.5 631 41.4
CDE04G0927 Ceratophyllum demersum HOM05D004921 ORTHO05D006008 3.3e-95 353.6 560 44.3
MD15G1329400 Malus domestica HOM05D004921 ORTHO05D006008 2.8e-94 350.5 383 54.0
Zm00001eb431730 Zea mays HOM05D004921 ORTHO05D006008 8.0e-94 349.0 659 41.3
Aa31LG6G15580 Aethionema arabicum HOM05D004921 ORTHO05D006008 1.4e-93 348.2 677 39.6
DCAR_001020 Daucus carota HOM05D004921 ORTHO05D006008 1.8e-93 347.8 656 41.9
HPP92_027138 Vanilla planifolia HOM05D004921 ORTHO05D006008 1.2e-92 345.1 328 59.1
HPP92_016473 Vanilla planifolia HOM05D004921 ORTHO05D006008 2.6e-92 344.0 410 51.2
CDE06G0766 Ceratophyllum demersum HOM05D004921 ORTHO05D006008 1.7e-91 341.3 515 47.4
Cc07_g15680 Coffea canephora HOM05D004921 ORTHO05D006008 8.3e-91 339.0 528 43.9
SEGI_07937 Sequoiadendron giganteum HOM05D004921 ORTHO05D006008 1.9e-87 327.8 420 47.9
unitig_0.g2479 Utricularia gibba HOM05D004921 ORTHO05D006008 7.6e-76 289.3 664 36.0
MBI05_g36740_MAGBIO Magnolia biondii HOM05D004921 ORTHO05D006008 2.1e-54 218.0 218 57.3
AagrBONN_evm.TU.Sc2ySwM_344.1023 Anthoceros agrestis HOM05D004921 ORTHO05D006008 4.0e-53 213.8 555 33.7
SEGI_00052 Sequoiadendron giganteum HOM05D004921 ORTHO05D006008 2.6e-52 211.1 311 45.3
Sabra07G0072000 Salix brachista HOM05D004921 ORTHO05D006008 4.9e-51 206.8 354 41.5
Mapoly0001s0396 Marchantia polymorpha HOM05D004921 ORTHO05D006008 9.3e-50 202.6 425 37.2
A01p00580 Brassica napus HOM05D004921 ORTHO05D006008 1.3e-48 198.7 264 46.6
SMO174G0199 Selaginella moellendorffii HOM05D004921 ORTHO05D006008 9.0e-45 186.0 498 29.9
Pp3c3_27510 Physcomitrium patens HOM05D004921 ORTHO05D006008 2.0e-44 184.9 531 30.5
Nitab4.5_0000518g0040 Nicotiana tabacum HOM05D004921 ORTHO05D006008 2.6e-44 184.5 445 36.0
BcaNung05547 Brassica carinata HOM05D004921 ORTHO05D006008 1.0e-43 182.6 223 51.6
Dinv16320 Davidia involucrata HOM05D004921 ORTHO05D006008 2.2e-43 181.4 124 72.6
Hma1.2p1_0070F.1_g037670 Hydrangea macrophylla HOM05D004921 ORTHO05D006008 2.5e-42 177.9 451 37.0
BraA01t00066Z Brassica rapa HOM05D004921 ORTHO05D006008 2.1e-41 174.9 193 52.3
CBR_g51480 Chara braunii HOM05D004921 ORTHO05D006008 6.7e-40 169.9 329 35.0
Nitab4.5_0000518g0050 Nicotiana tabacum HOM05D004921 ORTHO05D006008 6.7e-40 169.9 112 75.9
Cc07_g15670 Coffea canephora HOM05D004921 ORTHO05D006008 3.3e-39 167.5 118 71.2
CAN.G727.1 Capsicum annuum HOM05D004921 ORTHO05D006008 7.4e-39 166.4 137 65.0
BolC1t00074H Brassica oleracea HOM05D004921 ORTHO05D006008 1.1e-37 162.5 109 75.2
C01p00710 Brassica napus HOM05D004921 ORTHO05D006008 2.6e-36 157.9 110 74.5
Cpa.g.sc82.58 Carica papaya HOM05D004921 ORTHO05D006008 2.7e-33 147.9 113 69.9
Zm00001eb069160 Zea mays HOM05D004921 ORTHO05D006008 1.1e-29 136.0 471 34.0
Nn5g31279 Nelumbo nucifera HOM05D004921 ORTHO05D006008 2.6e-28 131.3 93 75.3
Cpa.g.sc82.56 Carica papaya HOM05D004921 ORTHO05D006008 1.0e-27 129.4 89 70.8
CSS0005403 Camellia sinensis var. sinensis HOM05D004921 ORTHO05D006008 5.0e-27 127.1 345 32.8
BcaNung00891 Brassica carinata HOM05D004921 ORTHO05D006008 8.5e-27 126.3 90 68.9
SEGI_21175 Sequoiadendron giganteum HOM05D004921 ORTHO05D006008 1.6e-25 122.1 110 54.5
SMO197G0017 Selaginella moellendorffii HOM05D004921 ORTHO05D006008 7.9e-25 119.8 223 35.4
MCO12G391 Micromonas commoda HOM05D004921 ORTHO05D006008 3.4e-20 104.4 232 29.7
Dinv04895 Davidia involucrata HOM05D004921 ORTHO05D006008 4.2e-18 97.4 139 46.8
Os04g0636600 Oryza sativa ssp. japonica HOM05D004921 ORTHO05D006008 1.6e-17 95.5 400 28.2
Dinv40591 Davidia involucrata HOM05D004921 ORTHO05D006008 7.9e-17 93.2 138 47.8
Dinv32118 Davidia involucrata HOM05D004921 ORTHO05D006008 1.0e-16 92.8 139 47.5
Dinv21952 Davidia involucrata HOM05D004921 ORTHO05D006008 2.3e-16 91.7 109 46.8
Cpa.g.sc82.54 Carica papaya HOM05D004921 ORTHO05D006008 7.4e-15 86.7 68 69.1
Actinidia16048 Actinidia chinensis HOM05D004921 ORTHO05D006008 1.8e-08 65.5 48 66.7
COL.COLO4_35617 Corchorus olitorius HOM05D004921 ORTHO05D006008 7.5e-07 60.1 61 55.7
MBI14_g34262_MAGBIO Magnolia biondii HOM05D000221 ORTHO05D006008 9.7e-07 59.7 41 68.3
MBI14_g14180_MAGBIO Magnolia biondii HOM05D000221 ORTHO05D006008 2.8e-06 58.2 41 63.4
Cre08.g358950 Chlamydomonas reinhardtii HOM05D004921 ORTHO05D006008 8.2e-06 56.6 125 28.8


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