Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sc03g0001020 Simmondsia chinensis HOM05D006999 ORTHO05D008936 0.0e+00 1210.7 673 100.0
AUR62008030 Chenopodium quinoa HOM05D006999 ORTHO05D008936 2.9e-200 702.6 653 65.2
Ah.02g126330 Amaranthus hybridus HOM05D006999 ORTHO05D008936 1.5e-191 673.7 652 63.0
CSS0009159 Camellia sinensis var. sinensis HOM05D006999 ORTHO05D008936 6.1e-190 668.3 655 55.6
CSS0003698 Camellia sinensis var. sinensis HOM05D006999 ORTHO05D008936 3.1e-189 666.0 655 55.4
Dinv29387 Davidia involucrata HOM05D006999 ORTHO05D008936 3.1e-189 666.0 622 56.9
Dinv39939 Davidia involucrata HOM05D006999 ORTHO05D008936 3.1e-189 666.0 649 54.7
QL06p044626 Quercus lobata HOM05D006999 ORTHO05D008936 5.8e-188 661.8 639 54.3
Prupe.7G147200 Prunus persica HOM05D006999 ORTHO05D008936 1.7e-187 660.2 631 63.2
DCAR_026261 Daucus carota HOM05D006999 ORTHO05D008936 2.7e-185 652.9 638 54.5
GSVIVG01019040001 Vitis vinifera HOM05D006999 ORTHO05D008936 1.7e-184 650.2 634 52.8
Cc05_g07730 Coffea canephora HOM05D006999 ORTHO05D008936 6.6e-184 648.3 637 53.4
CANSAT01G1763 Cannabis sativa HOM05D006999 ORTHO05D008936 6.2e-182 641.7 641 53.2
MSTRG.15411 Avicennia marina HOM05D006999 ORTHO05D008936 2.6e-180 636.3 624 53.7
CiPaw.01G031400 Carya illinoinensis HOM05D006999 ORTHO05D008936 3.4e-180 636.0 649 52.7
RcHm_v2.0_Chr2g0102951 Rosa chinensis HOM05D006999 ORTHO05D008936 3.4e-180 636.0 636 52.4
PGSC0003DMG400001186 Solanum tuberosum HOM05D006999 ORTHO05D008936 4.4e-180 635.6 651 59.1
Sopen02g015710 Solanum pennellii HOM05D006999 ORTHO05D008936 9.8e-180 634.4 631 60.7
Thecc.01G043300 Theobroma cacao HOM05D006999 ORTHO05D008936 3.2e-178 629.4 640 53.1
Solyc02g065510.1 Solanum lycopersicum HOM05D006999 ORTHO05D008936 4.6e-177 625.5 631 59.9
Oeu049321.1 Olea europaea HOM05D006999 ORTHO05D008936 6.0e-177 625.2 657 51.1
Oeu049309.1 Olea europaea HOM05D006999 ORTHO05D008936 7.8e-177 624.8 654 51.4
Manes.13G134700 Manihot esculenta HOM05D006999 ORTHO05D008936 1.3e-176 624.0 636 51.4
Migut.K00852 Erythranthe guttata HOM05D006999 ORTHO05D008936 1.7e-176 623.6 649 51.5
MD15G1270900 Malus domestica HOM05D006999 ORTHO05D008936 5.6e-175 618.6 617 53.3
Cpa.g.sc15.132 Carica papaya HOM05D006999 ORTHO05D008936 7.3e-175 618.2 647 51.6
Sabra05G0104700 Salix brachista HOM05D006999 ORTHO05D008936 1.2e-174 617.5 641 50.5
FAN23G0790 Fragaria x ananassa HOM05D006999 ORTHO05D008936 2.8e-174 616.3 639 57.9
ECA232G3871 Erigeron canadensis HOM05D006999 ORTHO05D008936 8.4e-171 604.7 631 56.6
EL10Ac6g14872 Beta vulgaris HOM05D006999 ORTHO05D008936 1.1e-170 604.4 646 59.3
Aqoxy6G01000 Aquilegia oxysepala HOM05D006999 ORTHO05D008936 1.6e-169 600.5 655 50.4
Potri.005G128600 Populus trichocarpa HOM05D006999 ORTHO05D008936 1.6e-169 600.5 647 49.6
Gohir.D12G067100 Gossypium hirsutum HOM05D006999 ORTHO05D008936 4.6e-169 599.0 637 51.2
PSO541G6186 Papaver somniferum HOM05D006999 ORTHO05D008936 4.6e-169 599.0 647 51.0
Cfa004253 Carpinus fangiana HOM05D006999 ORTHO05D008936 1.3e-168 597.4 635 51.7
SalBow1G0035 Salvia bowleyana HOM05D006999 ORTHO05D008936 2.3e-168 596.7 619 51.5
Gorai.008G070500 Gossypium raimondii HOM05D006999 ORTHO05D008936 3.9e-168 595.9 630 51.3
Duzib147G0594 Durio zibethinus HOM05D006999 ORTHO05D008936 5.1e-168 595.5 634 50.9
SGA_v2.0_scaffold62G21537 Striga asiatica HOM05D006999 ORTHO05D008936 1.9e-167 593.6 637 51.2
arahy.Tifrunner.gnm1.ann1.ZB5P2M Arachis hypogaea HOM05D006999 ORTHO05D008936 3.3e-167 592.8 661 52.0
Phvul.002G025400 Phaseolus vulgaris HOM05D006999 ORTHO05D008936 6.2e-166 588.6 663 56.0
FvH4_2g07140 Fragaria vesca HOM05D006999 ORTHO05D008936 8.1e-166 588.2 635 49.8
Gohir.A12G066700 Gossypium hirsutum HOM05D006999 ORTHO05D008936 1.5e-164 583.9 635 49.6
Nitab4.5_0000090g0200 Nicotiana tabacum HOM05D006999 ORTHO05D008936 3.4e-164 582.8 655 55.6
Aa31LG1G15180 Aethionema arabicum HOM05D006999 ORTHO05D008936 1.3e-163 580.9 643 49.1
CAN.G93.18 Capsicum annuum HOM05D006999 ORTHO05D008936 4.9e-163 578.9 651 57.1
Nitab4.5_0004292g0030 Nicotiana tabacum HOM05D006999 ORTHO05D008936 2.4e-162 576.6 642 56.1
VMungo1215G1670 Vigna mungo HOM05D006999 ORTHO05D008936 2.4e-162 576.6 658 55.3
Lj2g0003627 Lotus japonicus HOM05D006999 ORTHO05D008936 5.4e-162 575.5 626 47.9
vmacro00136 Vaccinium macrocarpon HOM05D006999 ORTHO05D008936 6.0e-161 572.0 639 56.7
AT5G66631 Arabidopsis thaliana HOM05D006999 ORTHO05D008936 2.5e-159 566.6 638 48.1
Lj4P134T41 Lonicera japonica HOM05D006999 ORTHO05D008936 9.6e-159 564.7 518 57.1
Rhsim02G0225000 Rhododendron simsii HOM05D006999 ORTHO05D008936 6.2e-158 562.0 542 56.1
Sp2g30070 Schrenkiella parvula HOM05D006999 ORTHO05D008936 8.1e-158 561.6 641 49.0
THA.LOC104826827 Tarenaya hassleriana HOM05D006999 ORTHO05D008936 2.4e-157 560.1 646 47.5
CARHR281110 Cardamine hirsuta HOM05D006999 ORTHO05D008936 9.0e-157 558.1 638 48.0
TAR381G1039 Trochodendron aralioides HOM05D006999 ORTHO05D008936 1.2e-156 557.8 658 54.4
Thhalv10005592m.g Eutrema salsugineum HOM05D006999 ORTHO05D008936 5.8e-156 555.4 641 48.4
Peaxi162Scf00019g00154 Petunia axillaris HOM05D006999 ORTHO05D008936 5.8e-156 555.4 657 48.7
TWI73G1021 Tripterygium wilfordii HOM05D006999 ORTHO05D008936 5.8e-156 555.4 633 52.4
Rhsim02G0229300 Rhododendron simsii HOM05D006999 ORTHO05D008936 3.8e-155 552.7 648 54.0
BraA07t29457Z Brassica rapa HOM05D006999 ORTHO05D008936 6.4e-155 552.0 639 47.9
AL8G44870 Arabidopsis lyrata HOM05D006999 ORTHO05D008936 1.1e-154 551.2 534 54.3
A07p17310 Brassica napus HOM05D006999 ORTHO05D008936 1.4e-154 550.8 638 47.5
BolC7t43049H Brassica oleracea HOM05D006999 ORTHO05D008936 1.4e-154 550.8 638 48.3
Ca_24822_v3 Cicer arietinum L. HOM05D006999 ORTHO05D008936 2.4e-154 550.1 666 45.3
Nn5g29479 Nelumbo nucifera HOM05D006999 ORTHO05D008936 6.0e-153 545.4 660 47.1
BcaC06g34726 Brassica carinata HOM05D006999 ORTHO05D008936 5.1e-152 542.3 654 46.8
Oeu049317.1 Olea europaea HOM05D006999 ORTHO05D008936 5.1e-152 542.3 548 53.1
Lalb_Chr09g0322731 Lupinus albus HOM05D006999 ORTHO05D008936 1.2e-148 531.2 649 49.9
BcaB02g10006 Brassica carinata HOM05D006999 ORTHO05D008936 5.8e-148 528.9 652 45.6
Medtr5g019030 Medicago truncatula HOM05D006999 ORTHO05D008936 1.0e-144 518.1 624 52.7
TPR.G34465 Trifolium pratense HOM05D006999 ORTHO05D008936 8.7e-144 515.0 649 45.6
Glyma.11G063000 Glycine max HOM05D006999 ORTHO05D008936 3.1e-141 506.5 637 51.6
FvH4_1g14280 Fragaria vesca HOM05D006999 ORTHO05D008936 1.0e-139 501.5 504 50.8
HanXRQChr09g0265111 Helianthus annuus HOM05D006999 ORTHO05D008936 1.7e-139 500.7 647 43.1
Atru.chr3.494 Acer truncatum HOM05D006999 ORTHO05D008936 1.6e-137 494.2 503 49.7
Ciclev10027580m.g Citrus clementina HOM05D006999 ORTHO05D008936 2.3e-136 490.3 627 51.7
Eucgr.I02485 Eucalyptus grandis HOM05D006999 ORTHO05D008936 3.9e-136 489.6 662 42.9
RcHm_v2.0_Chr2g0102871 Rosa chinensis HOM05D006999 ORTHO05D008936 3.7e-134 483.0 500 51.4
Actinidia36538 Actinidia chinensis HOM05D006999 ORTHO05D008936 2.4e-133 480.3 655 44.0
Haze_15147 Corylus avellana HOM05D000909 ORTHO05D000928 9.0e-133 478.4 642 43.8
C07p25190 Brassica napus HOM05D006999 ORTHO05D008936 3.8e-131 473.0 532 48.5
Psat2g162640 Pisum sativum HOM05D006999 ORTHO05D008936 1.1e-130 471.5 644 48.8
Carub.0008s2788 Capsella rubella HOM05D006999 ORTHO05D008936 3.0e-128 463.4 508 47.6
MBI16_g10978_MAGBIO Magnolia biondii HOM05D006999 ORTHO05D003554 8.2e-126 455.3 622 50.3
Hma1.2p1_2980F.1_g331210 Hydrangea macrophylla HOM05D006999 ORTHO05D008936 2.0e-124 450.7 461 51.8
HPP92_025826 Vanilla planifolia HOM05D006999 ORTHO05D008936 2.1e-121 440.7 630 40.8
CDE01G0819 Ceratophyllum demersum HOM05D006999 ORTHO05D008936 1.3e-115 421.4 643 40.0
Dinv18613 Davidia involucrata HOM05D006999 ORTHO05D008936 2.2e-110 404.1 624 38.9
Dinv26229 Davidia involucrata HOM05D006999 ORTHO05D008936 2.2e-110 404.1 624 38.9
ATR0782G111 Amborella trichopoda HOM05D006999 ORTHO05D008936 4.2e-106 389.8 682 37.0
Os01g0167750 Oryza sativa ssp. japonica HOM05D006999 ORTHO05D008936 4.1e-101 373.2 628 37.6
unitig_748.g8403 Utricularia gibba HOM05D006999 ORTHO05D008936 3.6e-97 360.1 367 50.4
Haze_25752 Corylus avellana HOM05D006999 ORTHO05D008936 5.2e-88 329.7 642 34.4
Zm00001eb123240 Zea mays HOM05D006999 ORTHO05D008936 5.2e-88 329.7 616 35.9
Cfa021547 Carpinus fangiana HOM05D006999 ORTHO05D008936 1.1e-85 322.0 649 38.4
SEGI_35610 Sequoiadendron giganteum HOM05D006999 ORTHO05D008936 2.5e-82 310.8 634 33.3
Cfa003411 Carpinus fangiana HOM05D006999 ORTHO05D008936 2.3e-56 224.6 591 29.1
Glyma.01G179251 Glycine max HOM05D006999 ORTHO05D008936 7.6e-55 219.5 267 49.1
FAN28G3023 Fragaria x ananassa HOM05D006999 ORTHO05D008936 1.2e-44 185.7 171 51.5
Glyma.01G179201 Glycine max HOM05D006999 ORTHO05D008936 2.3e-43 181.4 211 70.6
unitig_748.g8404 Utricularia gibba HOM05D006999 ORTHO05D008936 1.1e-42 179.1 249 41.0
COL.COLO4_22153 Corchorus olitorius HOM05D000225 ORTHO05D003554 3.2e-37 161.0 182 49.5
Aa31LG1G15170 Aethionema arabicum HOM05D000909 ORTHO05D008936 4.5e-23 114.0 151 47.7
MD02G1156600 Malus domestica HOM05D006999 ORTHO05D008936 1.6e-20 105.5 147 43.5
Actinidia12102 Actinidia chinensis HOM05D006999 ORTHO05D008936 5.3e-16 90.5 153 35.9
HanXRQChr09g0268161 Helianthus annuus HOM05D006999 ORTHO05D008936 4.2e-13 80.9 150 33.3
Mapoly0026s0011 Marchantia polymorpha HOM05D006999 ORTHO05D008936 2.3e-11 75.1 127 32.3
Pp3c4_14140 Physcomitrium patens HOM05D006999 ORTHO05D008936 3.3e-10 71.2 171 25.7
EL10Ac6g14214 Beta vulgaris HOM05D006999 ORTHO05D008936 7.4e-10 70.1 78 48.7
AagrBONN_evm.TU.Sc2ySwM_344.143 Anthoceros agrestis HOM05D004079 ORTHO05D008936 3.1e-08 64.7 109 31.2
FvH4_1g14250 Fragaria vesca HOM05D000909 ORTHO05D000928 3.1e-08 64.7 160 31.9
Mapoly0001s0055 Marchantia polymorpha HOM05D004079 ORTHO05D005437 4.1e-08 64.3 171 26.3
TAR629G1995 Trochodendron aralioides HOM05D002737 ORTHO05D009499 1.0e-06 59.7 166 25.9
CDE09G0095 Ceratophyllum demersum HOM05D006232 ORTHO05D007746 1.3e-06 59.3 207 23.7
PSO782G4392 Papaver somniferum HOM05D007202 ORTHO05D009125 1.3e-06 59.3 173 23.1
SalBow1G1508 Salvia bowleyana HOM05D006596 ORTHO05D008497 1.7e-06 58.9 373 23.3
Sabra02G0132400 Salix brachista HOM05D006232 ORTHO05D007746 2.2e-06 58.5 134 28.4
Sed0004899 Sechium edule HOM05D000424 ORTHO05D002854 2.2e-06 58.5 160 28.1
Sed0007517 Sechium edule HOM05D002737 ORTHO05D009499 2.2e-06 58.5 175 25.1
TWI79G0945 Tripterygium wilfordii HOM05D004783 ORTHO05D005581 5.0e-06 57.4 243 27.2
AUR62035582 Chenopodium quinoa HOM05D000001 ORTHO05D010669 8.5e-06 56.6 116 28.4


User provided reference genes

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