Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sc02g0009430 Simmondsia chinensis HOM05D007167 ORTHO05D001679 2.4e-33 144.8 68 100.0
Sc12g0000010 Simmondsia chinensis HOM05D007167 ORTHO05D001679 9.1e-25 116.3 54 100.0
Sc14g0003700 Simmondsia chinensis HOM05D007167 ORTHO05D013628 9.1e-25 116.3 54 100.0
Sc14g0004040 Simmondsia chinensis HOM05D007167 ORTHO05D001679 9.1e-25 116.3 54 100.0
Sc14g0004080 Simmondsia chinensis HOM05D007167 ORTHO05D001679 9.1e-25 116.3 54 100.0
Sc14g0004280 Simmondsia chinensis HOM05D007167 ORTHO05D001679 9.1e-25 116.3 54 100.0
Sc14g0004310 Simmondsia chinensis HOM05D007167 ORTHO05D001679 9.1e-25 116.3 54 100.0
Sc14g0004320 Simmondsia chinensis HOM05D007167 ORTHO05D013628 9.1e-25 116.3 54 100.0
ScUNg0000500 Simmondsia chinensis HOM05D013320 ORTHO05D001679 9.1e-25 116.3 54 100.0
ScUNg0001050 Simmondsia chinensis HOM05D007167 ORTHO05D001679 9.1e-25 116.3 54 100.0
Sc18g0006340 Simmondsia chinensis HOM05D007167 ORTHO05D000922 7.7e-24 113.2 53 98.1
ScUNg0000780 Simmondsia chinensis HOM05D007167 ORTHO05D013628 2.9e-23 111.3 63 85.7
Sc14g0003770 Simmondsia chinensis HOM05D007167 ORTHO05D001070 3.8e-23 110.9 51 100.0
Sc14g0003870 Simmondsia chinensis HOM05D007167 ORTHO05D013628 3.8e-23 110.9 51 100.0
Sc14g0004250 Simmondsia chinensis HOM05D007167 ORTHO05D013628 3.8e-23 110.9 51 100.0
Sc14g0004350 Simmondsia chinensis HOM05D007167 ORTHO05D001679 3.8e-23 110.9 51 100.0
ScUNg0000050 Simmondsia chinensis HOM05D007167 ORTHO05D000922 3.8e-23 110.9 51 100.0
ScUNg0000170 Simmondsia chinensis HOM05D007167 ORTHO05D000922 3.8e-23 110.9 51 100.0
ScUNg0000250 Simmondsia chinensis HOM05D007167 ORTHO05D013628 3.8e-23 110.9 51 100.0
ScUNg0000310 Simmondsia chinensis HOM05D007167 ORTHO05D001679 3.8e-23 110.9 51 100.0
ScUNg0000440 Simmondsia chinensis HOM05D013320 ORTHO05D000922 3.8e-23 110.9 51 100.0
ScUNg0000660 Simmondsia chinensis HOM05D007167 ORTHO05D001679 3.8e-23 110.9 51 100.0
ScUNg0000690 Simmondsia chinensis HOM05D007167 ORTHO05D001679 3.8e-23 110.9 51 100.0
ScUNg0000730 Simmondsia chinensis HOM05D007167 ORTHO05D001679 3.8e-23 110.9 51 100.0
ScUNg0000790 Simmondsia chinensis HOM05D007167 ORTHO05D013628 3.8e-23 110.9 51 100.0
ScUNg0000880 Simmondsia chinensis HOM05D007167 ORTHO05D000922 3.8e-23 110.9 51 100.0
ScUNg0000980 Simmondsia chinensis HOM05D007167 ORTHO05D000922 3.8e-23 110.9 51 100.0
ScUNg0001240 Simmondsia chinensis HOM05D007167 ORTHO05D001679 3.8e-23 110.9 51 100.0
ScUNg0001280 Simmondsia chinensis HOM05D007167 ORTHO05D001679 3.8e-23 110.9 51 100.0
ScUNg0001330 Simmondsia chinensis HOM05D007167 ORTHO05D013628 3.8e-23 110.9 51 100.0
ScUNg0001370 Simmondsia chinensis HOM05D007167 ORTHO05D001679 3.8e-23 110.9 51 100.0
ScUNg0001420 Simmondsia chinensis HOM05D007167 ORTHO05D001679 3.8e-23 110.9 51 100.0
ScUNg0001460 Simmondsia chinensis HOM05D007167 ORTHO05D000922 3.8e-23 110.9 51 100.0
unitig_245.g35372 Utricularia gibba HOM05D007167 ORTHO05D001679 9.4e-22 106.3 60 83.3
arahy.Tifrunner.gnm1.ann1.ET488V Arachis hypogaea HOM05D007167 ORTHO05D001679 4.7e-21 104.0 49 98.0
Rhsim05G0123600 Rhododendron simsii HOM05D016882 ORTHO05D001745 4.7e-21 104.0 49 98.0
unitig_145.g32368 Utricularia gibba HOM05D007167 ORTHO05D001679 6.1e-21 103.6 49 98.0
unitig_668.g29633 Utricularia gibba HOM05D007167 ORTHO05D001679 6.1e-21 103.6 49 98.0
Atru.chr10.38 Acer truncatum HOM05D007167 ORTHO05D001679 8.0e-21 103.2 49 98.0
Medtr0021s0120 Medicago truncatula HOM05D007167 ORTHO05D010211 3.0e-20 101.3 49 95.9
Psat0s8399g0040 Pisum sativum HOM05D007167 ORTHO05D001679 3.0e-20 101.3 49 95.9
Lj5g0012521 Lotus japonicus HOM05D007167 ORTHO05D001679 4.0e-20 100.9 49 95.9
Lj5g0016692 Lotus japonicus HOM05D007167 ORTHO05D001679 4.0e-20 100.9 49 95.9
Lj6g0017867 Lotus japonicus HOM05D007167 ORTHO05D001679 4.0e-20 100.9 49 95.9
LjContig00006g0001730 Lotus japonicus HOM05D007167 ORTHO05D001679 4.0e-20 100.9 49 95.9
LjContig00547g0012562 Lotus japonicus HOM05D007167 ORTHO05D001679 4.0e-20 100.9 49 95.9
EL10Ac5g11394 Beta vulgaris HOM05D007167 ORTHO05D000922 1.5e-19 99.0 53 86.8
EL10Ac2g03014 Beta vulgaris HOM05D007167 ORTHO05D001679 3.4e-19 97.8 49 93.9
CsaV3_UNG240550 Cucumis sativus L. HOM05D007167 ORTHO05D001679 3.7e-18 94.4 43 100.0
Mapoly4038s0001 Marchantia polymorpha HOM05D007167 ORTHO05D001679 8.3e-18 93.2 49 89.8
Sc06g0002460 Simmondsia chinensis HOM05D007167 ORTHO05D001679 1.4e-17 92.4 75 66.7
Sed0028154 Sechium edule HOM05D007167 ORTHO05D001679 7.0e-17 90.1 41 100.0
arahy.Tifrunner.gnm1.ann1.XTZD9Y Arachis hypogaea HOM05D007167 ORTHO05D001679 1.0e-15 86.3 39 100.0
SHI35535 Sapria himalayana HOM05D015261 ORTHO05D001679 4.2e-14 80.9 53 73.6
SHI35536 Sapria himalayana HOM05D015261 ORTHO05D000626 4.2e-14 80.9 53 73.6
SHI35538 Sapria himalayana HOM05D015261 ORTHO05D001679 4.2e-14 80.9 53 73.6
SHI39806 Sapria himalayana HOM05D015261 ORTHO05D001679 4.2e-14 80.9 53 73.6
SHI39841 Sapria himalayana HOM05D015261 ORTHO05D001679 4.2e-14 80.9 53 73.6
EL10As19g24181 Beta vulgaris HOM05D007167 ORTHO05D001679 4.0e-12 74.3 33 100.0
CBR_g28706 Chara braunii HOM05D010018 ORTHO05D003704 1.5e-11 72.4 44 77.3
Thecc.07G180900 Theobroma cacao HOM05D007167 ORTHO05D001679 3.4e-11 71.2 52 67.3
MCO14G190 Micromonas commoda HOM05D007167 ORTHO05D001679 5.7e-11 70.5 37 83.8
MCO14G191 Micromonas commoda HOM05D007167 ORTHO05D001679 5.7e-11 70.5 37 83.8
MCO14G192 Micromonas commoda HOM05D007167 ORTHO05D001679 5.7e-11 70.5 37 83.8
QL93p0473_0011 Quercus lobata HOM05D016732 ORTHO05D001679 5.7e-11 70.5 41 78.0
QL93p0473_0019 Quercus lobata HOM05D016732 ORTHO05D001679 5.7e-11 70.5 41 78.0
QL93p0473_0029 Quercus lobata HOM05D016732 ORTHO05D001679 5.7e-11 70.5 41 78.0
QL93p0539_0002 Quercus lobata HOM05D016732 ORTHO05D001679 5.7e-11 70.5 41 78.0
QL93p0853_0005 Quercus lobata HOM05D016732 ORTHO05D001679 5.7e-11 70.5 41 78.0
TAR408G0001 Trochodendron aralioides HOM05D007167 ORTHO05D001679 2.8e-10 68.2 41 75.6
QL93p0943_0001 Quercus lobata HOM05D016732 ORTHO05D001679 1.8e-09 65.5 40 75.0
Sc07g0005250 Simmondsia chinensis HOM05D007167 ORTHO05D001679 3.3e-06 54.7 31 80.6


User provided reference genes

Program Settings