Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sc02g0009360 Simmondsia chinensis HOM05D000294 ORTHO05D000177 2.8e-79 298.5 146 100.0
Atru.chr13.24 Acer truncatum HOM05D000294 ORTHO05D000177 1.0e-12 77.4 119 43.7
Cfa014163 Carpinus fangiana HOM05D000294 ORTHO05D000177 2.5e-11 72.8 123 40.7
Haze_22885 Corylus avellana HOM05D000294 ORTHO05D000177 4.2e-11 72.0 123 41.5
Potri.005G259000 Populus trichocarpa HOM05D000294 ORTHO05D000177 5.5e-11 71.6 123 43.9
Lj4A814T52 Lonicera japonica HOM05D000294 ORTHO05D000177 1.2e-10 70.5 123 39.8
Manes.05G130400 Manihot esculenta HOM05D000294 ORTHO05D000177 1.2e-10 70.5 119 45.4
Potri.002G002200 Populus trichocarpa HOM05D000294 ORTHO05D000177 1.2e-10 70.5 120 44.2
Manes.18G000750 Manihot esculenta HOM05D000294 ORTHO05D000177 2.1e-10 69.7 119 43.7
Rhsim06G0001100 Rhododendron simsii HOM05D000294 ORTHO05D000177 2.1e-10 69.7 120 41.7
QL02p016189 Quercus lobata HOM05D000294 ORTHO05D000177 2.7e-10 69.3 123 42.3
Thecc.08G098000 Theobroma cacao HOM05D000294 ORTHO05D000177 2.7e-10 69.3 132 43.2
PGR031G3223 Punica granatum HOM05D000294 ORTHO05D000177 4.7e-10 68.6 121 43.0
TWI56G0397 Tripterygium wilfordii HOM05D000294 ORTHO05D000177 6.1e-10 68.2 119 42.0
Ciclev10002292m.g Citrus clementina HOM05D000294 ORTHO05D000177 8.0e-10 67.8 119 42.0
CSS0015307 Camellia sinensis var. sinensis HOM05D000294 ORTHO05D000177 1.0e-09 67.4 119 38.7
Actinidia15542 Actinidia chinensis HOM05D000294 ORTHO05D000177 2.3e-09 66.2 119 40.3
Dinv24715 Davidia involucrata HOM05D000294 ORTHO05D000177 3.0e-09 65.9 131 43.5
Sabra02G0001500 Salix brachista HOM05D000294 ORTHO05D000177 5.2e-09 65.1 119 42.0
CiPaw.07G130500 Carya illinoinensis HOM05D000294 ORTHO05D000177 6.7e-09 64.7 129 41.9
Carub.0002s2348 Capsella rubella HOM05D000294 ORTHO05D000177 1.2e-08 63.9 125 40.0
COL.COLO4_12274 Corchorus olitorius HOM05D000294 ORTHO05D000177 1.2e-08 63.9 114 42.1
Dinv05514 Davidia involucrata HOM05D000294 ORTHO05D000177 1.2e-08 63.9 125 37.6
Eucgr.F01950 Eucalyptus grandis HOM05D000294 ORTHO05D000177 1.5e-08 63.5 127 37.8
MBI04_g02212_MAGBIO Magnolia biondii HOM05D000294 ORTHO05D000177 7.5e-08 61.2 122 38.5
A08p29130 Brassica napus HOM05D000294 ORTHO05D000177 9.7e-08 60.8 120 37.5
BraA08t34849Z Brassica rapa HOM05D000294 ORTHO05D000177 9.7e-08 60.8 120 37.5
Nn5g31077 Nelumbo nucifera HOM05D000294 ORTHO05D000177 1.3e-07 60.5 119 42.9
MD06G1001300 Malus domestica HOM05D000294 ORTHO05D000177 2.8e-07 59.3 124 40.3
ATR0605G244 Amborella trichopoda HOM05D000294 ORTHO05D000177 3.7e-07 58.9 121 39.7
PGR083G2123 Punica granatum HOM05D000294 ORTHO05D000177 6.3e-07 58.2 119 37.0
Nn6g31572 Nelumbo nucifera HOM05D000294 ORTHO05D000177 8.2e-07 57.8 118 36.4
Aqoxy6G03056 Aquilegia oxysepala HOM05D000294 ORTHO05D000177 1.8e-06 56.6 118 39.8
Eucgr.F03621 Eucalyptus grandis HOM05D000294 ORTHO05D000177 3.1e-06 55.8 123 39.0
Hund05063 Selenicereus undatus HOM05D000294 ORTHO05D000177 4.1e-06 55.5 138 35.5
MSTRG.24893 Avicennia marina HOM05D000294 ORTHO05D000177 5.3e-06 55.1 119 40.3


User provided reference genes

Program Settings