Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sc02g0009120 Simmondsia chinensis HOM05D006313 ORTHO05D007853 3.6e-296 1020.8 493 100.0
AUR62040798 Chenopodium quinoa HOM05D006313 ORTHO05D007853 1.4e-188 663.3 458 69.7
EL10Ac1g01951 Beta vulgaris HOM05D006313 ORTHO05D007853 3.1e-183 645.6 458 69.2
QL02p014292 Quercus lobata HOM05D006313 ORTHO05D007853 4.2e-180 635.2 457 66.7
Potri.005G251300 Populus trichocarpa HOM05D006313 ORTHO05D007853 5.5e-180 634.8 458 67.7
Dinv31948 Davidia involucrata HOM05D006313 ORTHO05D007853 1.6e-179 633.3 456 68.6
Hund05111 Selenicereus undatus HOM05D006313 ORTHO05D007853 2.7e-179 632.5 502 62.9
CiPaw.07G138200 Carya illinoinensis HOM05D006313 ORTHO05D007853 4.7e-179 631.7 458 67.0
Sabra05G0194600 Salix brachista HOM05D006313 ORTHO05D007853 8.0e-179 630.9 487 63.2
TWI12G0830 Tripterygium wilfordii HOM05D006313 ORTHO05D007853 4.0e-178 628.6 458 66.2
FvH4_2g37320 Fragaria vesca HOM05D006313 ORTHO05D007853 8.8e-178 627.5 457 66.5
FAN15G3120 Fragaria x ananassa HOM05D006313 ORTHO05D007853 1.2e-177 627.1 457 66.5
Potri.002G010100 Populus trichocarpa HOM05D006313 ORTHO05D007853 1.2e-177 627.1 454 67.2
Sabra02G0007500 Salix brachista HOM05D006313 ORTHO05D007853 7.5e-177 624.4 459 66.2
FAN20G0447 Fragaria x ananassa HOM05D006313 ORTHO05D007853 9.7e-177 624.0 454 67.0
Prupe.1G353800 Prunus persica HOM05D006313 ORTHO05D007853 9.7e-177 624.0 458 66.2
CSS0043965 Camellia sinensis var. sinensis HOM05D006313 ORTHO05D007853 1.7e-176 623.2 458 67.2
MD08G1002100 Malus domestica HOM05D006313 ORTHO05D007853 2.2e-176 622.9 458 65.7
Cfa014086 Carpinus fangiana HOM05D006313 ORTHO05D007853 2.8e-176 622.5 458 66.6
RcHm_v2.0_Chr6g0304381 Rosa chinensis HOM05D006313 ORTHO05D007853 1.1e-175 620.5 453 66.9
Haze_22787 Corylus avellana HOM05D006313 ORTHO05D007853 1.8e-175 619.8 458 66.8
FAN27G1942 Fragaria x ananassa HOM05D006313 ORTHO05D007853 1.8e-175 619.8 454 66.5
Actinidia37918 Actinidia chinensis HOM05D006313 ORTHO05D007853 1.6e-174 616.7 456 66.7
Manes.18G004800 Manihot esculenta HOM05D006313 ORTHO05D007853 2.7e-174 615.9 457 63.7
Thecc.08G059800 Theobroma cacao HOM05D006313 ORTHO05D007853 5.9e-174 614.8 454 65.2
GSVIVG01013365001 Vitis vinifera HOM05D006313 ORTHO05D007853 1.3e-173 613.6 457 66.3
TAR381G0755 Trochodendron aralioides HOM05D006313 ORTHO05D007853 2.9e-173 612.5 454 65.2
Ciclev10003249m.g Citrus clementina HOM05D006313 ORTHO05D007853 3.8e-173 612.1 456 66.0
Nn5g30955 Nelumbo nucifera HOM05D006313 ORTHO05D007853 5.5e-172 608.2 454 65.6
Rhsim07G0255100 Rhododendron simsii HOM05D006313 ORTHO05D007853 9.4e-172 607.4 457 66.3
Atru.chr13.141 Acer truncatum HOM05D006313 ORTHO05D007853 2.7e-171 605.9 459 65.1
Aqoxy5G01036 Aquilegia oxysepala HOM05D006313 ORTHO05D007853 4.7e-171 605.1 454 65.0
COL.COLO4_05223 Corchorus olitorius HOM05D006313 ORTHO05D007853 3.0e-170 602.4 457 64.6
Oeu000694.1 Olea europaea HOM05D006313 ORTHO05D007853 7.5e-169 597.8 457 64.6
Gohir.D05G182400 Gossypium hirsutum HOM05D006313 ORTHO05D007853 1.3e-168 597.0 456 64.5
Sed0015221 Sechium edule HOM05D006313 ORTHO05D007853 1.7e-168 596.7 457 64.8
CsaV3_4G037230 Cucumis sativus L. HOM05D006313 ORTHO05D007853 3.7e-168 595.5 457 62.8
MELO3C017021.2 Cucumis melo HOM05D006313 ORTHO05D007853 1.4e-167 593.6 457 62.8
Gohir.A05G179200 Gossypium hirsutum HOM05D006313 ORTHO05D007853 1.8e-167 593.2 456 64.0
PGR083G2847 Punica granatum HOM05D006313 ORTHO05D007853 1.8e-167 593.2 454 63.2
Gorai.009G187700 Gossypium raimondii HOM05D006313 ORTHO05D007853 7.0e-167 591.3 456 63.8
Hma1.2p1_0507F.1_g168580 Hydrangea macrophylla HOM05D006313 ORTHO05D007853 7.0e-167 591.3 474 62.9
vmacro04407 Vaccinium macrocarpon HOM05D006313 ORTHO05D007853 1.2e-166 590.5 492 60.8
Lj4A10G75 Lonicera japonica HOM05D006313 ORTHO05D007853 2.0e-166 589.7 460 64.3
Thhalv10016264m.g Eutrema salsugineum HOM05D006313 ORTHO05D007853 4.5e-166 588.6 463 62.2
MBI08_g24269_MAGBIO Magnolia biondii HOM05D006313 ORTHO05D007853 7.7e-166 587.8 458 64.0
PSO170G0983 Papaver somniferum HOM05D006313 ORTHO05D007853 7.7e-166 587.8 458 63.8
PSO210G6994 Papaver somniferum HOM05D006313 ORTHO05D007853 2.9e-165 585.9 458 63.3
Cc10_g00630 Coffea canephora HOM05D006313 ORTHO05D007853 3.3e-164 582.4 458 61.8
Peaxi162Scf00711g00530 Petunia axillaris HOM05D006313 ORTHO05D007853 2.1e-163 579.7 460 62.6
Migut.N02954 Erythranthe guttata HOM05D006313 ORTHO05D007853 1.8e-162 576.6 457 61.9
AL4G25490 Arabidopsis lyrata HOM05D006313 ORTHO05D007853 4.0e-162 575.5 461 61.6
THA.LOC104825426 Tarenaya hassleriana HOM05D006313 ORTHO05D007853 5.2e-162 575.1 458 60.3
CANSAT25G3184 Cannabis sativa HOM05D006313 ORTHO05D007853 2.0e-161 573.2 464 62.1
CAN.G311.119 Capsicum annuum HOM05D006313 ORTHO05D007853 4.4e-161 572.0 460 61.5
DCAR_013918 Daucus carota HOM05D006313 ORTHO05D007853 5.7e-161 571.6 457 60.6
Nitab4.5_0000588g0050 Nicotiana tabacum HOM05D006313 ORTHO05D007853 7.5e-161 571.2 456 61.6
AT2G30600 Arabidopsis thaliana HOM05D006313 ORTHO05D007853 9.8e-161 570.9 465 61.5
Duzib093G1521 Durio zibethinus HOM05D006313 ORTHO05D007853 1.7e-160 570.1 456 62.3
CARHR124070 Cardamine hirsuta HOM05D006313 ORTHO05D007853 2.2e-160 569.7 456 61.8
Lsat_1_v5_gn_9_45201 Lactuca sativa HOM05D006313 ORTHO05D007853 8.3e-160 567.8 456 61.2
Aa31LG5G6170 Aethionema arabicum HOM05D006313 ORTHO05D007853 1.4e-159 567.0 462 60.4
Cpa.g.sc26.189 Carica papaya HOM05D006313 ORTHO05D007853 5.4e-159 565.1 462 61.5
Solyc04g082420.3 Solanum lycopersicum HOM05D006313 ORTHO05D007853 2.7e-158 562.8 457 61.3
Sp4g13150 Schrenkiella parvula HOM05D006313 ORTHO05D007853 3.5e-158 562.4 461 60.7
Sopen04g036010 Solanum pennellii HOM05D006313 ORTHO05D007853 4.5e-158 562.0 459 60.8
A04p23350 Brassica napus HOM05D006313 ORTHO05D007853 5.9e-158 561.6 458 61.1
HanXRQChr15g0492461 Helianthus annuus HOM05D006313 ORTHO05D007853 1.3e-157 560.5 451 61.9
Carub.0004s1176 Capsella rubella HOM05D006313 ORTHO05D007853 2.3e-157 559.7 461 60.1
PGSC0003DMG400009982 Solanum tuberosum HOM05D006313 ORTHO05D007853 2.3e-157 559.7 458 60.5
Lalb_Chr01g0008341 Lupinus albus HOM05D006313 ORTHO05D007853 2.9e-157 559.3 460 60.9
BraA04t17863Z Brassica rapa HOM05D006313 ORTHO05D007853 3.8e-157 558.9 455 61.3
ECA232G0012 Erigeron canadensis HOM05D006313 ORTHO05D007853 1.5e-156 557.0 454 60.8
VMungo0647G1480 Vigna mungo HOM05D006313 ORTHO05D007853 1.9e-156 556.6 451 61.6
C04p59650 Brassica napus HOM05D006313 ORTHO05D007853 4.3e-156 555.4 458 61.1
Eucgr.F01772 Eucalyptus grandis HOM05D006313 ORTHO05D007853 7.3e-156 554.7 455 60.4
Glyma.14G223400 Glycine max HOM05D006313 ORTHO05D007853 1.2e-155 553.9 453 61.8
BolC4t27473H Brassica oleracea HOM05D006313 ORTHO05D007853 3.6e-155 552.4 455 61.3
arahy.Tifrunner.gnm1.ann1.N9IWSS Arachis hypogaea HOM05D006313 ORTHO05D007853 8.0e-155 551.2 458 60.5
arahy.Tifrunner.gnm1.ann1.TM2XQH Arachis hypogaea HOM05D006313 ORTHO05D007853 8.0e-155 551.2 458 60.5
Medtr5g066730 Medicago truncatula HOM05D006313 ORTHO05D007853 1.4e-154 550.4 452 61.5
Phvul.001G001100 Phaseolus vulgaris HOM05D006313 ORTHO05D007853 2.0e-153 546.6 453 60.3
BcaB06g28382 Brassica carinata HOM05D006313 ORTHO05D007853 1.3e-152 543.9 458 59.2
Psat2g064920 Pisum sativum HOM05D006313 ORTHO05D007853 2.2e-152 543.1 455 60.7
TPR.G38702 Trifolium pratense HOM05D006313 ORTHO05D007853 2.2e-152 543.1 454 60.8
SHI07994 Sapria himalayana HOM05D006313 ORTHO05D007853 2.9e-152 542.7 456 59.6
CDE04G1532 Ceratophyllum demersum HOM05D006313 ORTHO05D007853 5.4e-151 538.5 454 56.8
Lj5g0009044 Lotus japonicus HOM05D006313 ORTHO05D007853 5.4e-151 538.5 455 60.4
SGA_v2.0_scaffold54G19673 Striga asiatica HOM05D006313 ORTHO05D007853 9.2e-151 537.7 458 59.2
Ca_25243_v3 Cicer arietinum L. HOM05D006313 ORTHO05D007853 1.0e-149 534.3 449 59.9
HPP92_022696 Vanilla planifolia HOM05D006313 ORTHO05D007853 4.7e-139 498.8 461 54.9
ATR0661G251 Amborella trichopoda HOM05D006313 ORTHO05D007853 1.4e-138 497.3 455 56.5
Os05g0345500 Oryza sativa ssp. japonica HOM05D006313 ORTHO05D007853 3.6e-131 472.6 454 51.1
CDE02G1829 Ceratophyllum demersum HOM05D006313 ORTHO05D007853 1.8e-106 390.6 454 47.4
Pp3c3_5520 Physcomitrium patens HOM05D006313 ORTHO05D007853 1.9e-95 354.0 461 44.7
AagrBONN_evm.TU.Sc2ySwM_228.121 Anthoceros agrestis HOM05D006313 ORTHO05D007853 4.2e-95 352.8 455 42.9
SMO361G0777 Selaginella moellendorffii HOM05D006313 ORTHO05D007853 3.4e-89 333.2 461 41.9
Hma1.2p1_0507F.1_g168570 Hydrangea macrophylla HOM05D006313 ORTHO05D007853 2.6e-73 280.4 249 59.0
unitig_22.g5883 Utricularia gibba HOM05D006313 ORTHO05D007853 5.5e-71 272.7 267 50.9
SEGI_09974 Sequoiadendron giganteum HOM05D006313 ORTHO05D007853 7.2e-71 272.3 267 51.7
CBR_g18852 Chara braunii HOM05D006313 ORTHO05D007853 4.4e-68 263.1 492 34.6
AUR62036859 Chenopodium quinoa HOM05D006313 ORTHO05D007853 5.5e-55 219.5 173 63.0
Manes.18G005201 Manihot esculenta HOM05D006313 ORTHO05D007853 4.1e-42 176.8 162 54.3
SEGI_26691 Sequoiadendron giganteum HOM05D006313 ORTHO05D007853 5.0e-40 169.9 194 46.4
SEGI_14381 Sequoiadendron giganteum HOM05D006313 ORTHO05D007853 4.3e-39 166.8 191 46.6
Mapoly0001s0491 Marchantia polymorpha HOM05D006313 ORTHO05D007853 3.5e-33 147.1 229 39.3
Zm00001eb379580 Zea mays HOM05D006313 ORTHO05D007853 6.0e-33 146.4 189 41.8
unitig_22.g5882 Utricularia gibba HOM05D006313 ORTHO05D007853 1.3e-27 128.6 101 56.4
Sabra05G0194400 Salix brachista HOM05D006313 ORTHO05D007853 8.1e-22 109.4 80 68.8
Cre03.g158850 Chlamydomonas reinhardtii HOM05D006313 ORTHO05D007853 1.2e-20 105.5 167 34.7
PRCOL_00004404 Prasinoderma coloniale HOM05D006313 ORTHO05D007853 1.2e-20 105.5 130 36.9
Cfa012651 Carpinus fangiana HOM05D006313 ORTHO05D007853 2.0e-20 104.8 80 67.5
CSS0049724 Camellia sinensis var. sinensis HOM05D006313 ORTHO05D007853 4.4e-20 103.6 78 71.8
SEGI_38873 Sequoiadendron giganteum HOM05D006313 ORTHO05D007853 9.9e-20 102.4 197 35.0
CSS0044355 Camellia sinensis var. sinensis HOM05D006313 ORTHO05D007853 1.7e-11 75.1 61 65.6
arahy.Tifrunner.gnm1.ann1.9M02QF Arachis hypogaea HOM05D000431 ORTHO05D007853 2.1e-09 68.2 59 47.5
Prupe.2G260000 Prunus persica HOM05D002006 ORTHO05D002128 4.3e-07 60.5 113 30.1
Zm00001eb305500 Zea mays HOM05D000563 ORTHO05D000536 4.3e-07 60.5 133 31.6
Sed0003495 Sechium edule HOM05D003949 ORTHO05D004504 1.6e-06 58.5 162 27.2
DCAR_011734 Daucus carota HOM05D000563 ORTHO05D000536 6.2e-06 56.6 127 33.9
MELO3C015709.2 Cucumis melo HOM05D003949 ORTHO05D004504 8.1e-06 56.2 180 26.1


User provided reference genes

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