Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sc02g0009110 Simmondsia chinensis HOM05D006313 ORTHO05D007853 3.0e-187 658.3 312 100.0
Hund05111 Selenicereus undatus HOM05D006313 ORTHO05D007853 2.2e-142 509.2 315 74.6
EL10Ac1g01951 Beta vulgaris HOM05D006313 ORTHO05D007853 3.0e-139 498.8 326 73.0
GSVIVG01013365001 Vitis vinifera HOM05D006313 ORTHO05D007853 1.1e-138 496.9 315 73.0
RcHm_v2.0_Chr6g0304381 Rosa chinensis HOM05D006313 ORTHO05D007853 1.0e-134 483.8 315 70.2
QL02p014292 Quercus lobata HOM05D006313 ORTHO05D007853 1.3e-134 483.4 313 70.6
Hma1.2p1_0507F.1_g168570 Hydrangea macrophylla HOM05D006313 ORTHO05D007853 3.8e-134 481.9 315 70.2
Hma1.2p1_0507F.1_g168580 Hydrangea macrophylla HOM05D006313 ORTHO05D007853 3.8e-134 481.9 315 70.2
vmacro04407 Vaccinium macrocarpon HOM05D006313 ORTHO05D007853 8.4e-134 480.7 315 71.7
Rhsim07G0255100 Rhododendron simsii HOM05D006313 ORTHO05D007853 1.4e-133 479.9 315 71.4
CiPaw.07G138200 Carya illinoinensis HOM05D006313 ORTHO05D007853 4.2e-133 478.4 315 71.1
FAN15G3120 Fragaria x ananassa HOM05D006313 ORTHO05D007853 4.2e-133 478.4 315 69.8
MELO3C017021.2 Cucumis melo HOM05D006313 ORTHO05D007853 5.5e-133 478.0 315 70.2
Dinv31948 Davidia involucrata HOM05D006313 ORTHO05D007853 5.5e-133 478.0 315 69.2
CsaV3_4G037230 Cucumis sativus L. HOM05D006313 ORTHO05D007853 1.3e-131 473.4 315 69.5
Nitab4.5_0000588g0050 Nicotiana tabacum HOM05D006313 ORTHO05D007853 3.9e-131 471.9 314 70.4
FAN20G0447 Fragaria x ananassa HOM05D006313 ORTHO05D007853 1.1e-130 470.3 320 69.1
Ciclev10003249m.g Citrus clementina HOM05D006313 ORTHO05D007853 1.9e-130 469.5 315 69.2
TAR381G0755 Trochodendron aralioides HOM05D006313 ORTHO05D007853 1.9e-130 469.5 314 70.7
Gorai.009G187700 Gossypium raimondii HOM05D006313 ORTHO05D007853 3.3e-130 468.8 315 69.2
Prupe.1G353800 Prunus persica HOM05D006313 ORTHO05D007853 5.7e-130 468.0 315 68.3
HanXRQChr15g0492461 Helianthus annuus HOM05D006313 ORTHO05D007853 7.4e-130 467.6 313 69.6
Oeu000694.1 Olea europaea HOM05D006313 ORTHO05D007853 9.6e-130 467.2 314 69.1
Duzib093G1521 Durio zibethinus HOM05D006313 ORTHO05D007853 1.3e-129 466.8 315 69.5
Gohir.A05G179200 Gossypium hirsutum HOM05D006313 ORTHO05D007853 1.6e-129 466.5 315 69.2
Lsat_1_v5_gn_9_45201 Lactuca sativa HOM05D006313 ORTHO05D007853 1.6e-129 466.5 313 69.6
Potri.005G251300 Populus trichocarpa HOM05D006313 ORTHO05D007853 1.6e-129 466.5 315 69.8
Atru.chr13.141 Acer truncatum HOM05D006313 ORTHO05D007853 3.7e-129 465.3 316 68.7
Manes.18G004800 Manihot esculenta HOM05D006313 ORTHO05D007853 4.8e-129 464.9 315 69.5
CAN.G311.119 Capsicum annuum HOM05D006313 ORTHO05D007853 6.3e-129 464.5 314 68.8
MD08G1002100 Malus domestica HOM05D006313 ORTHO05D007853 6.3e-129 464.5 315 67.9
TWI12G0830 Tripterygium wilfordii HOM05D006313 ORTHO05D007853 1.1e-128 463.8 315 70.2
Cc10_g00630 Coffea canephora HOM05D006313 ORTHO05D007853 1.4e-128 463.4 314 70.1
Sabra05G0194600 Salix brachista HOM05D006313 ORTHO05D007853 1.4e-128 463.4 315 68.9
Sopen04g036010 Solanum pennellii HOM05D006313 ORTHO05D007853 1.8e-128 463.0 314 70.1
Glyma.14G223400 Glycine max HOM05D006313 ORTHO05D007853 4.1e-128 461.8 314 66.9
VMungo0647G1480 Vigna mungo HOM05D006313 ORTHO05D007853 1.2e-127 460.3 314 66.9
Migut.N02954 Erythranthe guttata HOM05D006313 ORTHO05D007853 1.5e-127 459.9 314 68.5
Gohir.D05G182400 Gossypium hirsutum HOM05D006313 ORTHO05D007853 1.5e-127 459.9 315 67.6
PGSC0003DMG400009982 Solanum tuberosum HOM05D006313 ORTHO05D007853 2.0e-127 459.5 314 69.7
Aqoxy5G01036 Aquilegia oxysepala HOM05D006313 ORTHO05D007853 2.6e-127 459.1 314 69.1
MBI08_g24269_MAGBIO Magnolia biondii HOM05D006313 ORTHO05D007853 2.6e-127 459.1 314 68.8
CANSAT25G3184 Cannabis sativa HOM05D006313 ORTHO05D007853 3.4e-127 458.8 320 67.2
PSO210G6994 Papaver somniferum HOM05D006313 ORTHO05D007853 2.2e-126 456.1 313 68.7
arahy.Tifrunner.gnm1.ann1.N9IWSS Arachis hypogaea HOM05D006313 ORTHO05D007853 2.9e-126 455.7 317 66.2
arahy.Tifrunner.gnm1.ann1.TM2XQH Arachis hypogaea HOM05D006313 ORTHO05D007853 2.9e-126 455.7 317 66.2
Peaxi162Scf00711g00530 Petunia axillaris HOM05D006313 ORTHO05D007853 3.8e-126 455.3 314 70.1
PGR083G2847 Punica granatum HOM05D006313 ORTHO05D007853 3.8e-126 455.3 312 67.6
Sabra02G0007500 Salix brachista HOM05D006313 ORTHO05D007853 1.4e-125 453.4 315 67.9
PSO170G0983 Papaver somniferum HOM05D006313 ORTHO05D007853 1.9e-125 453.0 313 68.1
Potri.002G010100 Populus trichocarpa HOM05D006313 ORTHO05D007853 3.2e-125 452.2 315 67.3
Eucgr.F01772 Eucalyptus grandis HOM05D006313 ORTHO05D007853 4.2e-125 451.8 314 66.9
Phvul.001G001100 Phaseolus vulgaris HOM05D006313 ORTHO05D007853 5.5e-125 451.4 314 65.3
SGA_v2.0_scaffold54G19673 Striga asiatica HOM05D006313 ORTHO05D007853 2.1e-124 449.5 314 66.6
Lj5g0009044 Lotus japonicus HOM05D006313 ORTHO05D007853 3.6e-124 448.7 314 66.2
Medtr5g066730 Medicago truncatula HOM05D006313 ORTHO05D007853 1.0e-123 447.2 314 65.3
ECA232G0012 Erigeron canadensis HOM05D006313 ORTHO05D007853 8.7e-123 444.1 313 67.4
CSS0043965 Camellia sinensis var. sinensis HOM05D006313 ORTHO05D007853 4.3e-122 441.8 314 66.6
Ca_25243_v3 Cicer arietinum L. HOM05D006313 ORTHO05D007853 7.4e-122 441.0 314 64.0
AUR62040798 Chenopodium quinoa HOM05D006313 ORTHO05D007853 2.8e-121 439.1 314 68.5
Haze_22787 Corylus avellana HOM05D006313 ORTHO05D007853 2.8e-121 439.1 298 68.1
DCAR_013918 Daucus carota HOM05D006313 ORTHO05D007853 4.8e-121 438.3 313 65.5
AT2G30600 Arabidopsis thaliana HOM05D006313 ORTHO05D007853 5.3e-120 434.9 315 62.9
Thecc.08G059800 Theobroma cacao HOM05D006313 ORTHO05D007853 5.3e-120 434.9 315 64.8
unitig_22.g5883 Utricularia gibba HOM05D006313 ORTHO05D007853 6.9e-120 434.5 314 61.8
THA.LOC104825426 Tarenaya hassleriana HOM05D006313 ORTHO05D007853 1.2e-119 433.7 314 64.3
AL4G25490 Arabidopsis lyrata HOM05D006313 ORTHO05D007853 4.5e-119 431.8 314 62.7
Thhalv10016264m.g Eutrema salsugineum HOM05D006313 ORTHO05D007853 7.7e-119 431.0 314 63.7
Lalb_Chr01g0008341 Lupinus albus HOM05D006313 ORTHO05D007853 1.3e-118 430.3 315 64.1
FAN27G1942 Fragaria x ananassa HOM05D006313 ORTHO05D007853 8.5e-118 427.6 315 65.1
Aa31LG5G6170 Aethionema arabicum HOM05D006313 ORTHO05D007853 1.9e-117 426.4 315 62.2
Carub.0004s1176 Capsella rubella HOM05D006313 ORTHO05D007853 1.9e-117 426.4 316 63.0
Nn5g30955 Nelumbo nucifera HOM05D006313 ORTHO05D007853 1.9e-117 426.4 282 69.5
C04p59650 Brassica napus HOM05D006313 ORTHO05D007853 1.6e-116 423.3 315 61.6
BolC4t27473H Brassica oleracea HOM05D006313 ORTHO05D007853 1.6e-116 423.3 315 61.6
CDE04G1532 Ceratophyllum demersum HOM05D006313 ORTHO05D007853 3.6e-116 422.2 315 63.5
ATR0661G251 Amborella trichopoda HOM05D006313 ORTHO05D007853 4.6e-116 421.8 314 62.4
A04p23350 Brassica napus HOM05D006313 ORTHO05D007853 4.6e-116 421.8 315 61.6
BraA04t17863Z Brassica rapa HOM05D006313 ORTHO05D007853 4.6e-116 421.8 315 61.6
CDE02G1829 Ceratophyllum demersum HOM05D006313 ORTHO05D007853 3.9e-115 418.7 315 63.2
Sp4g13150 Schrenkiella parvula HOM05D006313 ORTHO05D007853 1.1e-114 417.2 315 60.0
CARHR124070 Cardamine hirsuta HOM05D006313 ORTHO05D007853 1.5e-114 416.8 295 64.4
Cfa014086 Carpinus fangiana HOM05D006313 ORTHO05D007853 2.0e-114 416.4 312 63.1
Actinidia37918 Actinidia chinensis HOM05D006313 ORTHO05D007853 2.2e-113 412.9 266 71.4
HPP92_022696 Vanilla planifolia HOM05D006313 ORTHO05D007853 8.2e-113 411.0 314 60.8
SHI07994 Sapria himalayana HOM05D006313 ORTHO05D007853 1.3e-110 403.7 312 61.2
AUR62036859 Chenopodium quinoa HOM05D006313 ORTHO05D007853 8.2e-105 384.4 325 61.8
BcaB06g28382 Brassica carinata HOM05D006313 ORTHO05D007853 3.2e-101 372.5 315 56.2
AagrBONN_evm.TU.Sc2ySwM_228.121 Anthoceros agrestis HOM05D006313 ORTHO05D007853 1.4e-96 357.1 335 52.8
Lj4A10G75 Lonicera japonica HOM05D006313 ORTHO05D007853 9.8e-90 334.3 313 56.9
Mapoly0001s0491 Marchantia polymorpha HOM05D006313 ORTHO05D007853 1.3e-89 334.0 326 50.3
Psat2g064920 Pisum sativum HOM05D006313 ORTHO05D007853 1.3e-89 334.0 243 63.0
SMO361G0777 Selaginella moellendorffii HOM05D006313 ORTHO05D007853 3.1e-88 329.3 331 48.6
TPR.G21513 Trifolium pratense HOM05D006313 ORTHO05D007853 4.1e-88 328.9 191 75.9
CSS0049724 Camellia sinensis var. sinensis HOM05D006313 ORTHO05D007853 3.5e-87 325.9 285 58.2
Pp3c3_5520 Physcomitrium patens HOM05D006313 ORTHO05D007853 5.5e-85 318.5 333 48.6
Sed0015221 Sechium edule HOM05D006313 ORTHO05D007853 1.1e-80 304.3 228 62.7
Cpa.g.sc26.189 Carica papaya HOM05D006313 ORTHO05D007853 1.5e-77 293.9 221 62.4
Zm00001eb379580 Zea mays HOM05D006313 ORTHO05D007853 5.6e-69 265.4 219 57.5
SEGI_26691 Sequoiadendron giganteum HOM05D006313 ORTHO05D007853 1.4e-64 250.8 235 51.9
ClCG11G018700 Citrullus lanatus HOM05D006313 ORTHO05D007853 2.4e-64 250.0 146 75.3
Sabra05G0194300 Salix brachista HOM05D006313 ORTHO05D007853 3.3e-61 239.6 149 71.8
Cfa012651 Carpinus fangiana HOM05D006313 ORTHO05D007853 6.2e-60 235.3 222 53.6
Manes.18G005201 Manihot esculenta HOM05D006313 ORTHO05D007853 6.2e-60 235.3 176 65.3
CSS0044355 Camellia sinensis var. sinensis HOM05D006313 ORTHO05D007853 6.2e-52 208.8 190 58.9
Cre03.g158850 Chlamydomonas reinhardtii HOM05D006313 ORTHO05D007853 2.3e-51 206.8 182 51.6
Cpa.g.sc801.5 Carica papaya HOM05D006313 ORTHO05D007853 2.6e-50 203.4 123 69.1
CBR_g6381 Chara braunii HOM05D006313 ORTHO05D007853 8.4e-41 171.8 147 53.1
FvH4_2g37320 Fragaria vesca HOM05D006313 ORTHO05D007853 3.2e-32 143.3 122 56.6
COL.COLO4_05223 Corchorus olitorius HOM05D006313 ORTHO05D007853 4.2e-32 142.9 112 64.3
SEGI_13417 Sequoiadendron giganteum HOM05D006313 ORTHO05D007853 1.2e-31 141.4 93 67.7
Sabra05G0194400 Salix brachista HOM05D006313 ORTHO05D007853 4.6e-31 139.4 114 59.6
TPR.G38702 Trifolium pratense HOM05D006313 ORTHO05D007853 4.5e-26 122.9 115 52.2
COL.COLO4_05222 Corchorus olitorius HOM05D006313 ORTHO05D007853 1.3e-17 94.7 54 77.8
PRCOL_00004404 Prasinoderma coloniale HOM05D006313 ORTHO05D007853 1.1e-16 91.7 183 32.8
BolC3t20551H Brassica oleracea HOM05D006313 ORTHO05D007853 5.0e-09 66.2 52 57.7
CBR_g18849 Chara braunii HOM05D006313 ORTHO05D132002 3.0e-06 57.0 77 40.3
BcaC05g28338 Brassica carinata HOM05D004988 ORTHO05D018599 3.9e-06 56.6 50 52.0


User provided reference genes

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