Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sc02g0009100 Simmondsia chinensis HOM05D005571 ORTHO05D006919 2.6e-107 392.1 202 100.0
Hund01764 Selenicereus undatus HOM05D005571 ORTHO05D006919 4.6e-40 168.7 210 54.3
EL10Ac1g01953 Beta vulgaris HOM05D005571 ORTHO05D006919 6.6e-39 164.9 205 52.7
Haze_22782 Corylus avellana HOM05D005571 ORTHO05D006919 6.6e-39 164.9 209 52.2
ClCG08G009410 Citrullus lanatus HOM05D005571 ORTHO05D006919 2.5e-38 162.9 210 51.0
MELO3C026535.2 Cucumis melo HOM05D005571 ORTHO05D006919 3.3e-38 162.5 213 51.6
Potri.005G250800 Populus trichocarpa HOM05D005571 ORTHO05D006919 5.6e-38 161.8 203 51.7
Manes.18G005301 Manihot esculenta HOM05D005571 ORTHO05D006919 3.6e-37 159.1 209 49.3
Sabra05G0194000 Salix brachista HOM05D005571 ORTHO05D006919 4.8e-37 158.7 203 50.7
AUR62040795 Chenopodium quinoa HOM05D005571 ORTHO05D006919 6.2e-37 158.3 212 51.9
Thecc.08G059400 Theobroma cacao HOM05D005571 ORTHO05D006919 1.1e-36 157.5 211 49.3
Rhsim06G0007100 Rhododendron simsii HOM05D005571 ORTHO05D006919 1.8e-36 156.8 208 48.6
Ciclev10002509m.g Citrus clementina HOM05D005571 ORTHO05D006919 4.0e-36 155.6 200 48.5
TWI56G1114 Tripterygium wilfordii HOM05D005571 ORTHO05D006919 4.0e-36 155.6 209 49.8
Duzib116G0932 Durio zibethinus HOM05D005571 ORTHO05D006919 6.9e-36 154.8 208 49.0
vmacro21809 Vaccinium macrocarpon HOM05D005571 ORTHO05D006919 6.9e-36 154.8 212 49.5
TWI12G0392 Tripterygium wilfordii HOM05D005571 ORTHO05D006919 9.0e-36 154.5 212 50.5
Actinidia15492 Actinidia chinensis HOM05D005571 ORTHO05D006919 2.0e-35 153.3 207 47.8
Actinidia17042 Actinidia chinensis HOM05D005571 ORTHO05D006919 2.0e-35 153.3 190 51.6
CiPaw.07G138600 Carya illinoinensis HOM05D005571 ORTHO05D006919 3.4e-35 152.5 198 51.5
Ah.11g041150 Amaranthus hybridus HOM05D005571 ORTHO05D006919 5.8e-35 151.8 209 50.7
Manes.05G133900 Manihot esculenta HOM05D005571 ORTHO05D006919 7.6e-35 151.4 191 51.8
Cfa014080 Carpinus fangiana HOM05D005571 ORTHO05D006919 9.9e-35 151.0 209 50.2
Sed0002015 Sechium edule HOM05D005571 ORTHO05D006919 1.3e-34 150.6 204 47.5
CSS0030992 Camellia sinensis var. sinensis HOM05D005571 ORTHO05D006919 1.7e-34 150.2 205 49.3
CsaV3_6G031520 Cucumis sativus L. HOM05D005571 ORTHO05D006919 1.7e-34 150.2 213 48.4
COL.COLO4_05218 Corchorus olitorius HOM05D005571 ORTHO05D006919 4.9e-34 148.7 189 50.8
Potri.002G010400 Populus trichocarpa HOM05D005571 ORTHO05D006919 4.9e-34 148.7 210 48.6
Duzib093G0863 Durio zibethinus HOM05D005571 ORTHO05D006919 6.4e-34 148.3 192 49.0
Gohir.A05G179400 Gossypium hirsutum HOM05D005571 ORTHO05D006919 8.4e-34 147.9 198 51.5
Nitab4.5_0000588g0080 Nicotiana tabacum HOM05D005571 ORTHO05D006919 1.4e-33 147.1 193 52.3
CiPaw.08G073400 Carya illinoinensis HOM05D005571 ORTHO05D006919 1.9e-33 146.7 192 52.1
GSVIVG01008671001 Vitis vinifera HOM05D005571 ORTHO05D006919 1.9e-33 146.7 208 49.5
Gohir.D05G182600 Gossypium hirsutum HOM05D005571 ORTHO05D006919 4.2e-33 145.6 198 50.5
Gorai.009G187900 Gossypium raimondii HOM05D005571 ORTHO05D006919 4.2e-33 145.6 198 50.5
MSTRG.24929 Avicennia marina HOM05D005571 ORTHO05D006919 7.1e-33 144.8 202 47.5
Dinv05532 Davidia involucrata HOM05D005571 ORTHO05D006919 2.7e-32 142.9 200 49.0
QL02p014184 Quercus lobata HOM05D005571 ORTHO05D006919 2.7e-32 142.9 212 47.2
CSS0029462 Camellia sinensis var. sinensis HOM05D005571 ORTHO05D006919 3.5e-32 142.5 188 47.3
Sabra02G0007800 Salix brachista HOM05D005571 ORTHO05D006919 6.0e-32 141.7 211 47.9
PGR083G0609 Punica granatum HOM05D005571 ORTHO05D006919 3.9e-31 139.0 214 46.7
FvH4_2g37430 Fragaria vesca HOM05D005571 ORTHO05D006919 5.1e-31 138.7 213 48.4
Gohir.D02G100200 Gossypium hirsutum HOM05D005571 ORTHO05D006919 6.6e-31 138.3 205 45.9
Gorai.005G113600 Gossypium raimondii HOM05D005571 ORTHO05D006919 6.6e-31 138.3 205 45.9
Lj4A11T70 Lonicera japonica HOM05D005571 ORTHO05D006919 6.6e-31 138.3 219 46.1
FAN27G2782 Fragaria x ananassa HOM05D005571 ORTHO05D006919 1.1e-30 137.5 211 48.3
CAN.G311.116 Capsicum annuum HOM05D005571 ORTHO05D006919 1.5e-30 137.1 212 47.6
SGA_v2.0_scaffold133G34635 Striga asiatica HOM05D005571 ORTHO05D006919 1.9e-30 136.7 220 43.2
RcHm_v2.0_Chr6g0304291 Rosa chinensis HOM05D005571 ORTHO05D006919 2.5e-30 136.3 207 46.4
Migut.C00385 Erythranthe guttata HOM05D005571 ORTHO05D006919 4.3e-30 135.6 222 44.1
Lj1g0015612 Lotus japonicus HOM05D005571 ORTHO05D006919 5.6e-30 135.2 215 47.0
FAN20G2818 Fragaria x ananassa HOM05D005571 ORTHO05D006919 7.3e-30 134.8 211 48.8
FAN15G1374 Fragaria x ananassa HOM05D005571 ORTHO05D006919 1.3e-29 134.0 210 48.1
Hma1.2p1_0157F.1_g069390 Hydrangea macrophylla HOM05D005571 ORTHO05D006919 1.3e-29 134.0 191 48.2
Peaxi162Scf00893g00005 Petunia axillaris HOM05D005571 ORTHO05D006919 1.1e-28 131.0 193 47.2
MSTRG.977 Avicennia marina HOM05D005571 ORTHO05D006919 3.1e-28 129.4 206 44.7
Cfa012650 Carpinus fangiana HOM05D005571 ORTHO05D006919 5.3e-28 128.6 188 48.9
SalBow7G0698 Salvia bowleyana HOM05D005571 ORTHO05D006919 9.0e-28 127.9 220 42.7
TAR628G0603 Trochodendron aralioides HOM05D005571 ORTHO05D006919 1.2e-27 127.5 209 43.5
Atru.chr13.137 Acer truncatum HOM05D005571 ORTHO05D006919 1.5e-27 127.1 151 50.3
Sc15g0004410 Simmondsia chinensis HOM05D005571 ORTHO05D006919 1.5e-27 127.1 189 46.0
PGSC0003DMG400009903 Solanum tuberosum HOM05D005571 ORTHO05D006919 2.6e-27 126.3 194 45.9
VMungo1309G0957 Vigna mungo HOM05D005571 ORTHO05D006919 2.6e-27 126.3 206 46.1
Cc10_g00650 Coffea canephora HOM05D005571 ORTHO05D006919 3.4e-27 125.9 222 47.3
Sopen04g035980 Solanum pennellii HOM05D005571 ORTHO05D006919 7.6e-27 124.8 212 44.3
THA.LOC104825425 Tarenaya hassleriana HOM05D005571 ORTHO05D006919 9.9e-27 124.4 211 45.0
arahy.Tifrunner.gnm1.ann1.G9B5FS Arachis hypogaea HOM05D005571 ORTHO05D006919 1.3e-26 124.0 218 43.6
Hund05103 Selenicereus undatus HOM05D001348 ORTHO05D002788 1.3e-26 124.0 211 42.7
Oeu064631.1 Olea europaea HOM05D005571 ORTHO05D006919 2.2e-26 123.2 210 43.8
arahy.Tifrunner.gnm1.ann1.VC4QUA Arachis hypogaea HOM05D005571 ORTHO05D006919 2.9e-26 122.9 217 43.3
Glyma.06G018100 Glycine max HOM05D005571 ORTHO05D006919 2.9e-26 122.9 212 44.8
TPR.G38112 Trifolium pratense HOM05D005571 ORTHO05D006919 4.9e-26 122.1 218 42.7
SalBow5G5667 Salvia bowleyana HOM05D005571 ORTHO05D006919 6.4e-26 121.7 202 43.1
Glyma.04G017800 Glycine max HOM05D005571 ORTHO05D006919 1.9e-25 120.2 212 44.3
Oeu035840.1 Olea europaea HOM05D005571 ORTHO05D006919 2.4e-25 119.8 208 41.3
unitig_747.g21542 Utricularia gibba HOM05D005571 ORTHO05D006919 3.2e-25 119.4 212 37.7
Lalb_Chr23g0265781 Lupinus albus HOM05D005571 ORTHO05D006919 4.2e-25 119.0 200 44.0
Oeu000692.1 Olea europaea HOM05D005571 ORTHO05D006919 5.4e-25 118.6 214 43.5
HanXRQChr06g0183961 Helianthus annuus HOM05D005571 ORTHO05D006919 1.6e-24 117.1 192 43.8
CSS0039739 Camellia sinensis var. sinensis HOM05D005571 ORTHO05D006919 2.1e-24 116.7 197 42.6
Phvul.009G010900 Phaseolus vulgaris HOM05D005571 ORTHO05D006919 1.0e-23 114.4 206 44.7
AT5G42330 Arabidopsis thaliana HOM05D005571 ORTHO05D006919 1.8e-23 113.6 209 40.2
AUR62036861 Chenopodium quinoa HOM05D005571 ORTHO05D006919 2.3e-23 113.2 212 42.9
CANSAT25G0564 Cannabis sativa HOM05D005571 ORTHO05D006919 3.0e-23 112.8 194 46.4
Dinv31944 Davidia involucrata HOM05D005571 ORTHO05D006919 5.1e-23 112.1 194 44.8
Lsat_1_v5_gn_2_4041 Lactuca sativa HOM05D005571 ORTHO05D006919 8.7e-23 111.3 219 40.6
Aa31LG9G12460 Aethionema arabicum HOM05D005571 ORTHO05D006919 1.5e-22 110.5 215 40.5
BcaB01g05139 Brassica carinata HOM05D005571 ORTHO05D006919 1.5e-22 110.5 204 40.7
C03p11000 Brassica napus HOM05D005571 ORTHO05D006919 1.5e-22 110.5 204 40.7
DCAR_009532 Daucus carota HOM05D005571 ORTHO05D006919 1.5e-22 110.5 198 43.4
BcaB01g04868 Brassica carinata HOM05D005571 ORTHO05D006919 3.3e-22 109.4 208 41.3
A03p09420 Brassica napus HOM05D005571 ORTHO05D006919 7.4e-22 108.2 204 39.7
BraA03t10260Z Brassica rapa HOM05D005571 ORTHO05D006919 7.4e-22 108.2 204 39.7
BolC3t13569H Brassica oleracea HOM05D005571 ORTHO05D006919 9.6e-22 107.8 205 41.5
Medtr3g115300 Medicago truncatula HOM05D005571 ORTHO05D006919 9.6e-22 107.8 220 40.0
PSO675G2006 Papaver somniferum HOM05D005571 ORTHO05D006919 9.6e-22 107.8 183 41.0
Ca_15432_v3 Cicer arietinum L. HOM05D005571 ORTHO05D006919 1.3e-21 107.5 180 42.8
Ca_15457_v3 Cicer arietinum L. HOM05D005571 ORTHO05D006919 1.3e-21 107.5 180 42.8
Nn6g31737 Nelumbo nucifera HOM05D005571 ORTHO05D006919 2.1e-21 106.7 200 41.0
Psat0s2670g0120 Pisum sativum HOM05D005571 ORTHO05D006919 2.1e-21 106.7 221 39.8
ECA238G3324 Erigeron canadensis HOM05D005571 ORTHO05D007881 2.8e-21 106.3 170 42.9
HanXRQChr14g0428071 Helianthus annuus HOM05D005571 ORTHO05D006919 4.8e-21 105.5 218 42.7
PSO541G4697 Papaver somniferum HOM05D005571 ORTHO05D006919 6.2e-21 105.1 183 40.4
AL8G19260 Arabidopsis lyrata HOM05D005571 ORTHO05D006919 8.1e-21 104.8 215 40.5
Aqoxy6G01708 Aquilegia oxysepala HOM05D005571 ORTHO05D006919 1.8e-20 103.6 213 39.0
Carub.0008s0685 Capsella rubella HOM05D005571 ORTHO05D006919 2.4e-20 103.2 211 39.3
Thhalv10014687m.g Eutrema salsugineum HOM05D005571 ORTHO05D006919 2.4e-20 103.2 208 40.9
Prupe.1G354300 Prunus persica HOM05D005571 ORTHO05D006919 9.0e-20 101.3 263 35.4
CARHR284960 Cardamine hirsuta HOM05D005571 ORTHO05D006919 1.3e-18 97.4 217 40.6
THA.LOC104813174 Tarenaya hassleriana HOM05D005571 ORTHO05D006919 2.2e-18 96.7 211 41.2
Sp6g25100 Schrenkiella parvula HOM05D005571 ORTHO05D006919 3.8e-18 95.9 209 41.6
CSS0038566 Camellia sinensis var. sinensis HOM05D005571 ORTHO05D006919 1.9e-17 93.6 196 37.8
Sabra11G0114300 Salix brachista HOM05D005571 ORTHO05D006919 1.9e-17 93.6 121 50.4
unitig_0.g2084 Utricularia gibba HOM05D005571 ORTHO05D006919 1.2e-16 90.9 167 38.3
MBI05_g43168_MAGBIO Magnolia biondii HOM05D005571 ORTHO05D006919 7.9e-16 88.2 178 38.8
SHI42933 Sapria himalayana HOM05D005571 ORTHO05D006919 7.4e-14 81.6 177 36.7
BcaB08g36584 Brassica carinata HOM05D005571 ORTHO05D006919 9.6e-14 81.3 216 36.6
BolC9t58559H Brassica oleracea HOM05D005571 ORTHO05D006919 3.7e-13 79.3 171 38.0
Cpa.g.c36471 Carica papaya HOM05D005571 ORTHO05D006919 3.7e-13 79.3 83 53.0
BcaC04g18579 Brassica carinata HOM05D005571 ORTHO05D006919 1.1e-12 77.8 171 37.4
C09p56960 Brassica napus HOM05D005571 ORTHO05D006919 1.1e-12 77.8 171 37.4
Duzib128G0429 Durio zibethinus HOM05D005571 ORTHO05D006919 3.4e-11 72.8 87 48.3
Gohir.A02G084300 Gossypium hirsutum HOM05D005571 ORTHO05D006919 1.3e-10 70.9 137 38.7
A10p20370 Brassica napus HOM05D005571 ORTHO05D006919 3.8e-10 69.3 210 33.8
BraA10t44107Z Brassica rapa HOM05D005571 ORTHO05D006919 4.2e-09 65.9 150 34.0
Solyc04g082380.4 Solanum lycopersicum HOM05D005571 ORTHO05D006919 3.9e-07 59.3 117 41.0


User provided reference genes

Program Settings