Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sc02g0008840 Simmondsia chinensis HOM05D007648 ORTHO05D009613 4.3e-37 157.5 82 100.0
Sc02g0008880 Simmondsia chinensis HOM05D007648 ORTHO05D009613 1.6e-36 155.6 82 98.8
QL02p012929 Quercus lobata HOM05D007648 ORTHO05D009613 1.3e-28 129.4 81 81.5
Haze_22702 Corylus avellana HOM05D007648 ORTHO05D009613 2.1e-28 128.6 80 82.5
Manes.05G142600 Manihot esculenta HOM05D007648 ORTHO05D009613 4.8e-28 127.5 82 80.5
CiPaw.07G143700 Carya illinoinensis HOM05D007648 ORTHO05D009613 8.1e-28 126.7 82 80.5
TAR625G0376 Trochodendron aralioides HOM05D007648 ORTHO05D009613 1.8e-27 125.6 82 79.3
Dinv31891 Davidia involucrata HOM05D007648 ORTHO05D009613 2.4e-27 125.2 81 79.0
THA.LOC104811443 Tarenaya hassleriana HOM05D007648 ORTHO05D009613 2.4e-27 125.2 78 80.8
Atru.chr13.217 Acer truncatum HOM05D007648 ORTHO05D009613 6.9e-27 123.6 80 81.2
CSS0030217 Camellia sinensis var. sinensis HOM05D007648 ORTHO05D009613 9.0e-27 123.2 82 80.5
Lsat_1_v5_gn_5_1580 Lactuca sativa HOM05D007648 ORTHO05D009613 9.0e-27 123.2 82 74.4
AL2G36100 Arabidopsis lyrata HOM05D007648 ORTHO05D009613 2.6e-26 121.7 80 75.0
Hund05152 Selenicereus undatus HOM05D000399 ORTHO05D000304 2.6e-26 121.7 80 76.2
GSVIVG01008741001 Vitis vinifera HOM05D007648 ORTHO05D009613 3.4e-26 121.3 82 76.8
Carub.0002s2295 Capsella rubella HOM05D007648 ORTHO05D009613 4.5e-26 120.9 82 74.4
AT1G76065 Arabidopsis thaliana HOM05D007648 ORTHO05D009613 9.9e-26 119.8 80 73.8
CARHR069590 Cardamine hirsuta HOM05D007648 ORTHO05D009613 9.9e-26 119.8 77 76.6
PSO210G3155 Papaver somniferum HOM05D007648 ORTHO05D009613 1.3e-25 119.4 73 80.8
Sabra14G0141300 Salix brachista HOM05D000525 ORTHO05D001368 1.3e-25 119.4 81 77.8
EL10Ac1g02083 Beta vulgaris HOM05D000399 ORTHO05D000304 1.7e-25 119.0 80 77.5
HanXRQChr06g0185111 Helianthus annuus HOM05D007648 ORTHO05D009613 1.7e-25 119.0 80 73.8
Potri.014G181400 Populus trichocarpa HOM05D007648 ORTHO05D009613 1.7e-25 119.0 81 77.8
Thecc.08G051700 Theobroma cacao HOM05D007648 ORTHO05D009613 2.2e-25 118.6 81 76.5
Ah.00g000660 Amaranthus hybridus HOM05D007648 ORTHO05D009613 2.9e-25 118.2 80 75.0
Actinidia29767 Actinidia chinensis HOM05D007648 ORTHO05D009613 4.9e-25 117.5 81 76.5
Ciclev10003012m.g Citrus clementina HOM05D007648 ORTHO05D009613 4.9e-25 117.5 82 73.2
COL.COLO4_26084 Corchorus olitorius HOM05D007648 ORTHO05D009613 4.9e-25 117.5 81 75.3
Os02g0667000 Oryza sativa ssp. japonica HOM05D007648 ORTHO05D009613 4.9e-25 117.5 75 78.7
Aa31LG4G6180 Aethionema arabicum HOM05D007648 ORTHO05D009613 6.4e-25 117.1 75 78.7
ClCG05G015420 Citrullus lanatus HOM05D007648 ORTHO05D009613 6.4e-25 117.1 81 71.6
Duzib093G2040 Durio zibethinus HOM05D007648 ORTHO05D009613 1.9e-24 115.5 82 75.6
Thhalv10019391m.g Eutrema salsugineum HOM05D007648 ORTHO05D009613 2.4e-24 115.2 77 75.3
Eucgr.F03708 Eucalyptus grandis HOM05D007648 ORTHO05D009613 5.4e-24 114.0 76 76.3
TWI12G0541 Tripterygium wilfordii HOM05D007648 ORTHO05D009613 7.1e-24 113.6 81 71.6
Glyma.17G261200 Glycine max HOM05D007648 ORTHO05D009613 1.6e-23 112.5 76 73.7
Lj5g0008894 Lotus japonicus HOM05D007648 ORTHO05D009613 3.5e-23 111.3 77 72.7
Sed0006121 Sechium edule HOM05D007648 ORTHO05D009613 3.5e-23 111.3 80 70.0
Lalb_Chr19g0131601 Lupinus albus HOM05D007648 ORTHO05D009613 4.6e-23 110.9 77 72.7
Aqoxy5G01099 Aquilegia oxysepala HOM05D007648 ORTHO05D009613 6.0e-23 110.5 77 72.7
BraA08t32933Z Brassica rapa HOM05D007648 ORTHO05D009613 6.0e-23 110.5 77 72.7
Rhsim07G0248300 Rhododendron simsii HOM05D007648 ORTHO05D009613 6.0e-23 110.5 82 69.5
arahy.Tifrunner.gnm1.ann1.EILY3I Arachis hypogaea HOM05D007648 ORTHO05D009613 7.9e-23 110.2 77 74.0
CDE04G2628 Ceratophyllum demersum HOM05D007648 ORTHO05D009613 7.9e-23 110.2 75 76.0
Gohir.D01G035600 Gossypium hirsutum HOM05D007648 ORTHO05D009613 7.9e-23 110.2 76 73.7
arahy.Tifrunner.gnm1.ann1.8I3IQY Arachis hypogaea HOM05D007648 ORTHO05D009613 1.0e-22 109.8 80 71.2
A08p09340 Brassica napus HOM05D007648 ORTHO05D009613 1.0e-22 109.8 77 72.7
BolC8t48002H Brassica oleracea HOM05D007648 ORTHO05D009613 1.0e-22 109.8 77 72.7
CsaV3_3G046120 Cucumis sativus L. HOM05D007648 ORTHO05D009613 1.0e-22 109.8 82 69.5
Gorai.002G043700 Gossypium raimondii HOM05D007648 ORTHO05D009613 1.0e-22 109.8 76 73.7
Phvul.001G002600 Phaseolus vulgaris HOM05D007648 ORTHO05D009613 1.0e-22 109.8 77 74.0
Prupe.1G359500 Prunus persica HOM05D007648 ORTHO05D009613 1.3e-22 109.4 81 67.9
Gohir.A01G044700 Gossypium hirsutum HOM05D007648 ORTHO05D009613 1.8e-22 109.0 76 72.4
Phvul.001G002300 Phaseolus vulgaris HOM05D007648 ORTHO05D009613 2.3e-22 108.6 77 72.7
RcHm_v2.0_Chr6g0303661 Rosa chinensis HOM05D007648 ORTHO05D009613 2.3e-22 108.6 81 67.9
BcaB07g30075 Brassica carinata HOM05D007648 ORTHO05D009613 3.0e-22 108.2 77 72.7
BcaC07g37632 Brassica carinata HOM05D007648 ORTHO05D009613 3.0e-22 108.2 77 71.4
FvH4_2g37960 Fragaria vesca HOM05D007648 ORTHO05D009613 3.0e-22 108.2 81 66.7
ECA238G3742 Erigeron canadensis HOM05D000002 ORTHO05D000001 3.9e-22 107.8 73 74.0
Medtr1g026100 Medicago truncatula HOM05D007648 ORTHO05D009613 3.9e-22 107.8 77 71.4
HPP92_003481 Vanilla planifolia HOM05D007648 ORTHO05D009613 3.9e-22 107.8 86 67.4
MELO3C003728.2 Cucumis melo HOM05D007648 ORTHO05D009613 5.1e-22 107.5 82 68.3
vmacro17151 Vaccinium macrocarpon HOM05D007648 ORTHO05D009613 5.1e-22 107.5 82 69.5
Cc10_g01140 Coffea canephora HOM05D007648 ORTHO05D009613 6.7e-22 107.1 78 69.2
Psat6g001120 Pisum sativum HOM05D007648 ORTHO05D009613 6.7e-22 107.1 77 71.4
VMungo0647G0751 Vigna mungo HOM05D007648 ORTHO05D009613 6.7e-22 107.1 74 74.3
Rhsim07G0248100 Rhododendron simsii HOM05D007648 ORTHO05D009613 8.7e-22 106.7 77 71.4
CAN.G22.4 Capsicum annuum HOM05D007648 ORTHO05D009613 1.5e-21 105.9 80 66.2
Ca_13484_v3 Cicer arietinum L. HOM05D007648 ORTHO05D009613 1.5e-21 105.9 77 70.1
HPP92_026879 Vanilla planifolia HOM05D007648 ORTHO05D009613 1.5e-21 105.9 86 67.4
FAN15G0474 Fragaria x ananassa HOM05D007648 ORTHO05D009613 1.9e-21 105.5 81 65.4
FAN20G1741 Fragaria x ananassa HOM05D007648 ORTHO05D009613 2.5e-21 105.1 81 65.4
PGSC0003DMG400023820 Solanum tuberosum HOM05D007648 ORTHO05D009613 3.3e-21 104.8 80 65.0
MD08G1007600 Malus domestica HOM05D007648 ORTHO05D009613 4.3e-21 104.4 82 65.9
MD15G1006800 Malus domestica HOM05D007648 ORTHO05D009613 7.4e-21 103.6 82 64.6
Sopen06g017690 Solanum pennellii HOM05D007648 ORTHO05D009613 7.4e-21 103.6 80 63.8
BraA02t08664Z Brassica rapa HOM05D007648 ORTHO05D009613 1.3e-20 102.8 75 70.7
MBI05_g46751_MAGBIO Magnolia biondii HOM05D007648 ORTHO05D009613 1.6e-20 102.4 73 71.2
DCAR_021446 Daucus carota HOM05D007648 ORTHO05D009613 2.8e-20 101.7 77 67.5
CAN.G22.7 Capsicum annuum HOM05D007648 ORTHO05D009613 3.7e-20 101.3 74 67.6
SalBow7G1731 Salvia bowleyana HOM05D007648 ORTHO05D009613 6.2e-20 100.5 80 66.2
Migut.C00899 Erythranthe guttata HOM05D007648 ORTHO05D009613 9.0e-19 96.7 75 65.3
Nitab4.5_0004193g0030 Nicotiana tabacum HOM05D000998 ORTHO05D000806 6.5e-17 90.5 64 70.3
AUR62036713 Chenopodium quinoa HOM05D000399 ORTHO05D000304 1.4e-16 89.4 134 43.3
BolC2t11627H Brassica oleracea HOM05D007648 ORTHO05D009613 1.9e-16 89.0 77 62.3
Peaxi162Scf00394g00212 Petunia axillaris HOM05D007648 ORTHO05D009613 9.3e-16 86.7 67 65.7
Nitab4.5_0000716g0050 Nicotiana tabacum HOM05D000998 ORTHO05D000806 7.9e-15 83.6 59 69.5
C02p55750 Brassica napus HOM05D007648 ORTHO05D009613 6.7e-14 80.5 65 63.1
A02p36690 Brassica napus HOM05D007648 ORTHO05D009613 8.7e-14 80.1 60 66.7
Mapoly0088s0028 Marchantia polymorpha HOM05D007648 ORTHO05D009613 8.7e-14 80.1 76 52.6
Pp3c8_20950 Physcomitrium patens HOM05D007648 ORTHO05D009613 3.3e-13 78.2 76 52.6
AagrBONN_evm.TU.Sc2ySwM_344.3278 Anthoceros agrestis HOM05D007648 ORTHO05D009613 4.3e-13 77.8 76 53.9
Os03g0159800 Oryza sativa ssp. japonica HOM05D007648 ORTHO05D009613 2.8e-12 75.1 44 79.5
AUR62013884 Chenopodium quinoa HOM05D007648 ORTHO05D009613 1.2e-10 69.7 44 75.0
unitig_748.g7721 Utricularia gibba HOM05D007648 ORTHO05D009613 5.0e-09 64.3 44 68.2
SalBow1G6040 Salvia bowleyana HOM05D038733 ORTHO05D009613 2.5e-08 62.0 44 68.2
SalBow7G3523 Salvia bowleyana HOM05D038733 ORTHO05D009613 2.5e-08 62.0 44 68.2
Actinidia37950 Actinidia chinensis HOM05D007648 ORTHO05D009613 4.6e-07 57.8 38 68.4
MCO07G444 Micromonas commoda HOM05D007648 ORTHO05D009613 3.0e-06 55.1 71 45.1


User provided reference genes

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