Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sc02g0008640 Simmondsia chinensis HOM05D006069 ORTHO05D008101 7.4e-53 210.3 109 100.0
Sc15g0004900 Simmondsia chinensis HOM05D006069 ORTHO05D008101 1.9e-40 169.1 109 80.7
Cfa013967 Carpinus fangiana HOM05D006069 ORTHO05D008101 3.3e-37 158.3 109 75.2
EL10Ac1g02174 Beta vulgaris HOM05D006069 ORTHO05D008101 9.7e-37 156.8 106 76.4
Haze_22649 Corylus avellana HOM05D006069 ORTHO05D008101 9.7e-37 156.8 108 74.1
Haze_22650 Corylus avellana HOM05D003905 ORTHO05D005329 1.3e-36 156.4 109 74.3
Cfa013969 Carpinus fangiana HOM05D006069 ORTHO05D008101 1.1e-35 153.3 107 73.8
Sabra02G0016400 Salix brachista HOM05D006069 ORTHO05D008101 1.4e-35 152.9 101 75.2
Thecc.08G047500 Theobroma cacao HOM05D006069 ORTHO05D008101 7.0e-35 150.6 112 71.4
AUR62041483 Chenopodium quinoa HOM05D006069 ORTHO05D008101 2.7e-34 148.7 114 71.1
COL.COLO4_26120 Corchorus olitorius HOM05D006069 ORTHO05D008101 3.5e-34 148.3 113 69.0
Duzib093G2212 Durio zibethinus HOM05D006069 ORTHO05D008101 7.7e-34 147.1 112 67.0
Hma1.2p1_0733F.1_g210300 Hydrangea macrophylla HOM05D006069 ORTHO05D008101 1.0e-33 146.7 104 72.1
Eucgr.H00971 Eucalyptus grandis HOM05D006069 ORTHO05D008101 2.9e-33 145.2 108 72.2
Cpa.g.sc64.165 Carica papaya HOM05D006069 ORTHO05D008101 3.8e-33 144.8 109 69.7
CiPaw.07G148400 Carya illinoinensis HOM05D006069 ORTHO05D008101 3.8e-33 144.8 106 71.7
Potri.002G020200 Populus trichocarpa HOM05D006069 ORTHO05D008101 3.8e-33 144.8 103 71.8
Cpa.g.c46170 Carica papaya HOM05D006069 ORTHO05D008101 5.0e-33 144.4 106 70.8
Duzib041G0459 Durio zibethinus HOM05D006069 ORTHO05D008101 5.0e-33 144.4 112 67.9
Oeu061972.1 Olea europaea HOM05D006069 ORTHO05D008101 5.0e-33 144.4 103 74.8
Ciclev10002907m.g Citrus clementina HOM05D006069 ORTHO05D008101 6.5e-33 144.1 110 67.3
Oeu014170.1 Olea europaea HOM05D006069 ORTHO05D008101 8.5e-33 143.7 103 72.8
Potri.005G241200 Populus trichocarpa HOM05D006069 ORTHO05D008101 8.5e-33 143.7 101 71.3
TAR625G1525 Trochodendron aralioides HOM05D006069 ORTHO05D008101 1.5e-32 142.9 106 69.8
Gohir.D05G258200 Gossypium hirsutum HOM05D006069 ORTHO05D008101 1.9e-32 142.5 108 70.4
Gorai.009G269500 Gossypium raimondii HOM05D006069 ORTHO05D008101 1.9e-32 142.5 108 70.4
QL02p011928 Quercus lobata HOM05D006069 ORTHO05D008101 2.5e-32 142.1 106 70.8
QL11p034297 Quercus lobata HOM05D006069 ORTHO05D008101 2.5e-32 142.1 106 70.8
Gohir.A05G256400 Gossypium hirsutum HOM05D006069 ORTHO05D008101 5.5e-32 141.0 108 69.4
Ah.00g000260 Amaranthus hybridus HOM05D006069 ORTHO05D008101 7.2e-32 140.6 108 67.6
TWI12G0868 Tripterygium wilfordii HOM05D006069 ORTHO05D008101 1.2e-31 139.8 109 68.8
FvH4_2g38290 Fragaria vesca HOM05D006069 ORTHO05D008101 2.1e-31 139.0 103 71.8
Gohir.D06G005300 Gossypium hirsutum HOM05D006069 ORTHO05D008101 2.1e-31 139.0 114 65.8
Gorai.010G002500 Gossypium raimondii HOM05D006069 ORTHO05D008101 2.1e-31 139.0 114 65.8
TWI56G0900 Tripterygium wilfordii HOM05D006069 ORTHO05D008101 2.1e-31 139.0 106 68.9
Dinv31861 Davidia involucrata HOM05D006069 ORTHO05D000038 2.7e-31 138.7 104 71.2
Gohir.A06G002300 Gossypium hirsutum HOM05D006069 ORTHO05D008101 2.7e-31 138.7 114 65.8
Oeu054481.1 Olea europaea HOM05D006069 ORTHO05D008101 3.6e-31 138.3 103 70.9
Atru.chr13.270 Acer truncatum HOM05D006069 ORTHO05D008101 4.7e-31 137.9 112 65.2
Sabra05G0186700 Salix brachista HOM05D006069 ORTHO05D008101 4.7e-31 137.9 101 68.3
SGA_v2.0_scaffold11G05937 Striga asiatica HOM05D006069 ORTHO05D008101 6.1e-31 137.5 103 70.9
CSS0019530 Camellia sinensis var. sinensis HOM05D006069 ORTHO05D008101 8.0e-31 137.1 104 67.3
Glyma.14G219800 Glycine max HOM05D006069 ORTHO05D008101 8.0e-31 137.1 110 66.4
SalBow8G0098 Salvia bowleyana HOM05D006069 ORTHO05D008101 1.0e-30 136.7 104 72.1
PGR031G1000 Punica granatum HOM05D006069 ORTHO05D008101 1.4e-30 136.3 102 69.6
FAN15G3329 Fragaria x ananassa HOM05D006069 ORTHO05D008101 1.8e-30 136.0 103 69.9
Manes.18G012400 Manihot esculenta HOM05D006069 ORTHO05D008101 1.8e-30 136.0 113 61.9
RcHm_v2.0_Chr6g0303091 Rosa chinensis HOM05D006069 ORTHO05D008101 2.3e-30 135.6 106 68.9
FAN27G3260 Fragaria x ananassa HOM05D006069 ORTHO05D008101 3.0e-30 135.2 103 69.9
Nn6g32021 Nelumbo nucifera HOM05D006069 ORTHO05D008101 4.0e-30 134.8 108 67.6
Lalb_Chr19g0131451 Lupinus albus HOM05D006069 ORTHO05D008101 5.2e-30 134.4 109 67.0
VMungo0647G0980 Vigna mungo HOM05D006069 ORTHO05D008101 8.8e-30 133.7 111 65.8
Solyc04g078060.1 Solanum lycopersicum HOM05D006069 ORTHO05D008101 2.6e-29 132.1 115 62.6
Actinidia16995 Actinidia chinensis HOM05D006069 ORTHO05D006669 3.4e-29 131.7 105 64.8
Sopen04g031650 Solanum pennellii HOM05D006069 ORTHO05D008101 3.4e-29 131.7 115 62.6
Medtr3g113620 Medicago truncatula HOM05D006069 ORTHO05D008101 4.4e-29 131.3 102 67.6
Prupe.1G363800 Prunus persica HOM05D006069 ORTHO05D008101 4.4e-29 131.3 107 64.5
SalBow7G4587 Salvia bowleyana HOM05D006069 ORTHO05D008101 4.4e-29 131.3 105 67.6
PGSC0003DMG400021511 Solanum tuberosum HOM05D006069 ORTHO05D008101 4.4e-29 131.3 115 62.6
Migut.N03168 Erythranthe guttata HOM05D006069 ORTHO05D008101 9.8e-29 130.2 101 69.3
Phvul.001G005300 Phaseolus vulgaris HOM05D006069 ORTHO05D008101 9.8e-29 130.2 111 64.0
Manes.05G145900 Manihot esculenta HOM05D006069 ORTHO05D008101 2.8e-28 128.6 94 67.0
MD08G1011100 Malus domestica HOM05D006069 ORTHO05D008101 4.8e-28 127.9 109 64.2
HanXRQChr13g0387231 Helianthus annuus HOM05D006069 ORTHO05D008101 6.3e-28 127.5 105 67.6
Lalb_Chr01g0008621 Lupinus albus HOM05D006069 ORTHO05D008101 6.3e-28 127.5 113 60.2
Lalb_Chr03g0033431 Lupinus albus HOM05D006069 ORTHO05D008101 6.3e-28 127.5 109 59.6
Sp5g30930 Schrenkiella parvula HOM05D006069 ORTHO05D008101 8.3e-28 127.1 118 57.6
unitig_82.g27107 Utricularia gibba HOM05D006069 ORTHO05D008101 8.3e-28 127.1 101 66.3
THA.LOC104805018 Tarenaya hassleriana HOM05D006069 ORTHO05D008101 1.1e-27 126.7 115 62.6
Actinidia15431 Actinidia chinensis HOM05D006069 ORTHO05D008101 1.4e-27 126.3 111 61.3
Glyma.17G258800 Glycine max HOM05D006069 ORTHO05D008101 1.4e-27 126.3 105 63.8
Lsat_1_v5_gn_8_29900 Lactuca sativa HOM05D006069 ORTHO05D008101 1.4e-27 126.3 105 66.7
Duzib116G0547 Durio zibethinus HOM05D006069 ORTHO05D008101 1.8e-27 125.9 97 69.1
Nitab4.5_0000569g0030 Nicotiana tabacum HOM05D006069 ORTHO05D008101 1.8e-27 125.9 108 63.0
THA.LOC104811416 Tarenaya hassleriana HOM05D006069 ORTHO05D008101 2.4e-27 125.6 113 61.1
AT1G75810 Arabidopsis thaliana HOM05D006069 ORTHO05D008101 4.1e-27 124.8 120 55.8
Nitab4.5_0000934g0080 Nicotiana tabacum HOM05D006069 ORTHO05D008101 4.1e-27 124.8 120 57.5
AL2G35800 Arabidopsis lyrata HOM05D006069 ORTHO05D008101 5.4e-27 124.4 120 55.8
Migut.C00852 Erythranthe guttata HOM05D006069 ORTHO05D008101 7.0e-27 124.0 94 70.2
arahy.Tifrunner.gnm1.ann1.LEZM1J Arachis hypogaea HOM05D006069 ORTHO05D008101 1.6e-26 122.9 112 61.6
unitig_747.g21531 Utricularia gibba HOM05D006069 ORTHO05D008101 2.0e-26 122.5 102 63.7
Thhalv10019558m.g Eutrema salsugineum HOM05D006069 ORTHO05D008101 2.7e-26 122.1 118 55.9
Ca_00837_v3 Cicer arietinum L. HOM05D006069 ORTHO05D008101 3.5e-26 121.7 103 62.1
VMungo1309G1320 Vigna mungo HOM05D006069 ORTHO05D008101 3.5e-26 121.7 109 58.7
Aa31LG4G6010 Aethionema arabicum HOM05D006069 ORTHO05D008101 5.9e-26 120.9 117 55.6
CANSAT25G1864 Cannabis sativa HOM05D006069 ORTHO05D008101 5.9e-26 120.9 111 59.5
A02p20240 Brassica napus HOM05D006069 ORTHO05D008101 1.0e-25 120.2 120 55.8
BraA02t07058Z Brassica rapa HOM05D006069 ORTHO05D008101 1.0e-25 120.2 120 55.8
BcaC03g15627 Brassica carinata HOM05D006069 ORTHO05D008101 1.3e-25 119.8 120 55.0
C02p33660 Brassica napus HOM05D006069 ORTHO05D008101 1.3e-25 119.8 120 55.0
BolC2t09338H Brassica oleracea HOM05D006069 ORTHO05D008101 1.3e-25 119.8 120 55.0
Carub.0002s2266 Capsella rubella HOM05D006069 ORTHO05D008101 1.3e-25 119.8 121 53.7
MD15G1011100 Malus domestica HOM05D006069 ORTHO05D008101 1.3e-25 119.8 105 64.8
BcaB05g24944 Brassica carinata HOM05D006069 ORTHO05D008101 1.7e-25 119.4 123 54.5
DCAR_016725 Daucus carota HOM05D006069 ORTHO05D008101 2.3e-25 119.0 106 61.3
Nitab4.5_0007809g0010 Nicotiana tabacum HOM05D006069 ORTHO05D008101 2.9e-25 118.6 106 61.3
DCAR_013877 Daucus carota HOM05D006069 ORTHO05D000038 6.5e-25 117.5 104 63.5
CARHR069230 Cardamine hirsuta HOM05D006069 ORTHO05D008101 2.5e-24 115.5 118 53.4
Lsat_1_v5_gn_0_33081 Lactuca sativa HOM05D006069 ORTHO05D008101 3.3e-24 115.2 107 61.7
Peaxi162Scf00081g00135 Petunia axillaris HOM05D002628 ORTHO05D008101 3.3e-24 115.2 105 57.1
Sopen12g030410 Solanum pennellii HOM05D006069 ORTHO05D008101 4.2e-24 114.8 113 56.6
Rhsim06G0020100 Rhododendron simsii HOM05D006069 ORTHO05D008101 5.5e-24 114.4 93 65.6
BcaC08g47069 Brassica carinata HOM05D006069 ORTHO05D008101 1.2e-23 113.2 118 51.7
Psat0s2878g0120 Pisum sativum HOM05D006069 ORTHO05D008101 1.2e-23 113.2 106 57.5
Glyma.06G023700 Glycine max HOM05D006069 ORTHO05D008101 1.6e-23 112.8 110 57.3
PGSC0003DMG400011549 Solanum tuberosum HOM05D006069 ORTHO05D008101 1.6e-23 112.8 115 55.7
SGA_v2.0_scaffold47G17498 Striga asiatica HOM05D006069 ORTHO05D008101 2.1e-23 112.5 106 59.4
Lalb_Chr11g0061821 Lupinus albus HOM05D006069 ORTHO05D008101 2.3e-22 109.0 104 53.8
Phvul.009G017800 Phaseolus vulgaris HOM05D006069 ORTHO05D008101 5.2e-22 107.8 94 61.7
ECA233G2757 Erigeron canadensis HOM05D006069 ORTHO05D008101 1.5e-21 106.3 94 59.6
Lalb_Chr23g0266111 Lupinus albus HOM05D006069 ORTHO05D008101 3.4e-21 105.1 104 51.9
arahy.Tifrunner.gnm1.ann1.Q2AYB8 Arachis hypogaea HOM05D006069 ORTHO05D008101 9.8e-21 103.6 111 53.2
C06p49760 Brassica napus HOM05D006069 ORTHO05D008101 9.8e-21 103.6 118 47.5
Medtr1g025490 Medicago truncatula HOM05D006069 ORTHO05D008101 2.2e-20 102.4 110 51.8
BcaC08g47325 Brassica carinata HOM05D006069 ORTHO05D008101 2.8e-20 102.1 120 48.3
BolC6t40015H Brassica oleracea HOM05D006069 ORTHO05D008101 2.8e-20 102.1 120 48.3
Aqoxy5G01811 Aquilegia oxysepala HOM05D006069 ORTHO05D008101 3.7e-20 101.7 111 51.4
Nitab4.5_0003228g0030 Nicotiana tabacum HOM05D006069 ORTHO05D008101 8.3e-20 100.5 105 54.3
arahy.Tifrunner.gnm1.ann1.KJD857 Arachis hypogaea HOM05D006069 ORTHO05D008101 1.2e-18 96.7 113 49.6
PSO700G0183 Papaver somniferum HOM05D006069 ORTHO05D008101 3.5e-18 95.1 118 46.6
Dinv26438 Davidia involucrata HOM05D006069 ORTHO05D008101 4.5e-18 94.7 78 67.9
AUR62040543 Chenopodium quinoa HOM05D006069 ORTHO05D009490 7.8e-18 94.0 70 74.3
Psat6g002280 Pisum sativum HOM05D006069 ORTHO05D008101 7.8e-18 94.0 107 48.6
BcaC08g47066 Brassica carinata HOM05D006069 ORTHO05D008101 1.0e-17 93.6 115 47.8
PSO170G3064 Papaver somniferum HOM05D006069 ORTHO05D008101 3.8e-17 91.7 110 47.3
Peaxi162Scf00160g00114 Petunia axillaris HOM05D006069 ORTHO05D008101 3.6e-15 85.1 108 47.2
A07p41340 Brassica napus HOM05D006069 ORTHO05D032697 4.3e-08 61.6 68 50.0
SalBow6G6594 Salvia bowleyana HOM05D006069 ORTHO05D008101 9.5e-08 60.5 56 62.5
SalBow6G5718 Salvia bowleyana HOM05D006069 ORTHO05D008101 2.3e-06 55.8 55 61.8


User provided reference genes

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