Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sc02g0008600 Simmondsia chinensis HOM05D006392 ORTHO05D008010 3.6e-191 671.4 334 100.0
EL10Ac1g02188 Beta vulgaris HOM05D006392 ORTHO05D008010 3.0e-137 492.3 326 73.3
AUR62033899 Chenopodium quinoa HOM05D006392 ORTHO05D008010 1.5e-133 479.9 326 73.0
TAR628G0005 Trochodendron aralioides HOM05D006392 ORTHO05D008010 1.6e-127 459.9 326 66.3
Rhsim06G0021200 Rhododendron simsii HOM05D006392 ORTHO05D008010 6.3e-127 458.0 328 66.8
CSS0006206 Camellia sinensis var. sinensis HOM05D006392 ORTHO05D008010 1.1e-126 457.2 326 66.6
CSS0012189 Camellia sinensis var. sinensis HOM05D006392 ORTHO05D008010 1.1e-126 457.2 326 66.6
GSVIVG01009916001 Vitis vinifera HOM05D006392 ORTHO05D008010 5.3e-126 454.9 326 67.5
Hma1.2p1_0638F.1_g193900 Hydrangea macrophylla HOM05D006392 ORTHO05D008010 1.5e-125 453.4 326 66.6
QL02p011683 Quercus lobata HOM05D006392 ORTHO05D008010 2.0e-125 453.0 327 66.7
Lsat_1_v5_gn_8_30701 Lactuca sativa HOM05D006392 ORTHO05D008010 3.4e-125 452.2 326 66.3
HanXRQChr13g0387101 Helianthus annuus HOM05D006392 ORTHO05D008010 1.0e-124 450.7 326 66.0
CAN.G311.35 Capsicum annuum HOM05D006392 ORTHO05D008010 8.5e-124 447.6 326 64.4
TWI56G0581 Tripterygium wilfordii HOM05D006392 ORTHO05D008010 1.2e-122 443.7 328 66.5
Lj6g0002207 Lotus japonicus HOM05D006392 ORTHO05D008010 2.1e-122 443.0 329 66.3
ECA233G3412 Erigeron canadensis HOM05D006392 ORTHO05D008010 6.1e-122 441.4 326 64.1
CsaV3_3G045910 Cucumis sativus L. HOM05D006392 ORTHO05D008010 7.9e-122 441.0 327 63.3
Eucgr.F01664 Eucalyptus grandis HOM05D006392 ORTHO05D008010 7.9e-122 441.0 327 65.4
Actinidia21265 Actinidia chinensis HOM05D006392 ORTHO05D008010 1.4e-121 440.3 327 65.4
Prupe.1G364700 Prunus persica HOM05D006392 ORTHO05D008010 1.8e-121 439.9 331 64.7
Oeu014179.1 Olea europaea HOM05D006392 ORTHO05D008010 2.3e-121 439.5 327 64.5
PGSC0003DMG400009939 Solanum tuberosum HOM05D006392 ORTHO05D008010 1.1e-120 437.2 326 63.8
Thecc.08G045200 Theobroma cacao HOM05D006392 ORTHO05D008010 2.5e-120 436.0 327 63.6
Sopen04g035110 Solanum pennellii HOM05D006392 ORTHO05D008010 5.7e-120 434.9 326 63.2
Duzib093G0848 Durio zibethinus HOM05D006392 ORTHO05D008010 7.4e-120 434.5 327 63.0
MSTRG.1188 Avicennia marina HOM05D006392 ORTHO05D008010 9.7e-120 434.1 326 63.8
Solyc04g081500.3 Solanum lycopersicum HOM05D006392 ORTHO05D008010 2.8e-119 432.6 326 62.9
Cpa.g.sc26.51 Carica papaya HOM05D006392 ORTHO05D008010 4.8e-119 431.8 328 64.6
Aqoxy6G00284_Aqoxy6G00285 Aquilegia oxysepala HOM05D006392 ORTHO05D008010 1.1e-118 430.6 322 64.0
Lj4C23T1 Lonicera japonica HOM05D006392 ORTHO05D008010 2.4e-118 429.5 345 60.3
CiPaw.07G149200 Carya illinoinensis HOM05D006392 ORTHO05D008010 3.1e-118 429.1 329 63.5
Potri.002G021700 Populus trichocarpa HOM05D006392 ORTHO05D008010 5.3e-118 428.3 329 62.0
Sed0018359 Sechium edule HOM05D006392 ORTHO05D008010 5.3e-118 428.3 324 62.0
TWI36G0533 Tripterygium wilfordii HOM05D006392 ORTHO05D008010 5.3e-118 428.3 326 64.7
Lalb_Chr20g0119891 Lupinus albus HOM05D006392 ORTHO05D008010 6.9e-118 427.9 324 63.6
Gohir.A01G111000 Gossypium hirsutum HOM05D006392 ORTHO05D008010 2.6e-117 426.0 327 63.0
SalBow7G2189 Salvia bowleyana HOM05D006392 ORTHO05D008010 3.4e-117 425.6 338 60.9
Gorai.002G123300 Gossypium raimondii HOM05D006392 ORTHO05D008010 4.5e-117 425.2 327 63.0
PSO675G2043 Papaver somniferum HOM05D006392 ORTHO05D008010 5.9e-117 424.9 323 63.5
Ca_00791_v3 Cicer arietinum L. HOM05D006392 ORTHO05D008010 1.0e-116 424.1 329 62.6
Gohir.D01G097700 Gossypium hirsutum HOM05D006392 ORTHO05D008010 1.0e-116 424.1 327 63.0
MD08G1012700 Malus domestica HOM05D006392 ORTHO05D008010 1.0e-116 424.1 328 61.9
CANSAT25G2040 Cannabis sativa HOM05D006392 ORTHO05D008010 1.3e-116 423.7 327 62.4
MD15G1011700 Malus domestica HOM05D006392 ORTHO05D008010 1.3e-116 423.7 327 62.1
Glyma.09G103100 Glycine max HOM05D006392 ORTHO05D008010 5.0e-116 421.8 324 63.3
DCAR_023015 Daucus carota HOM05D006392 ORTHO05D008010 6.5e-116 421.4 326 61.3
Psat1g169520 Pisum sativum HOM05D006392 ORTHO05D008010 6.5e-116 421.4 334 62.0
Potri.005G240000 Populus trichocarpa HOM05D006392 ORTHO05D008010 6.5e-116 421.4 329 60.8
Hund05186 Selenicereus undatus HOM05D006392 ORTHO05D008010 8.5e-116 421.0 328 66.5
PSO541G2958 Papaver somniferum HOM05D006392 ORTHO05D008010 3.2e-115 419.1 323 62.2
AUR62041903 Chenopodium quinoa HOM05D006392 ORTHO05D008010 4.2e-115 418.7 326 66.6
Haze_22639 Corylus avellana HOM05D006392 ORTHO05D008010 5.5e-115 418.3 367 57.5
Phvul.005G022200 Phaseolus vulgaris HOM05D006392 ORTHO05D008010 7.2e-115 417.9 324 63.3
Ciclev10001496m.g Citrus clementina HOM05D006392 ORTHO05D008010 1.2e-114 417.2 325 62.2
Dinv31849 Davidia involucrata HOM05D006392 ORTHO05D008010 1.2e-114 417.2 305 65.2
Manes.05G146900 Manihot esculenta HOM05D006392 ORTHO05D008010 2.1e-114 416.4 308 65.9
Migut.C00843 Erythranthe guttata HOM05D006392 ORTHO05D008010 4.7e-114 415.2 326 61.3
Cfa013957 Carpinus fangiana HOM05D006392 ORTHO05D008010 6.1e-114 414.8 321 64.8
ATR0810G120 Amborella trichopoda HOM05D006392 ORTHO05D008010 7.9e-114 414.5 326 61.3
Ca_07152_v3 Cicer arietinum L. HOM05D006392 ORTHO05D008010 7.9e-114 414.5 327 62.1
Sabra05G0185500 Salix brachista HOM05D006392 ORTHO05D008010 1.8e-113 413.3 329 60.2
Medtr2g029040 Medicago truncatula HOM05D006392 ORTHO05D008010 8.8e-113 411.0 329 60.8
RcHm_v2.0_Chr6g0302911 Rosa chinensis HOM05D006392 ORTHO05D008010 1.1e-112 410.6 327 60.6
PGR083G2660 Punica granatum HOM05D006392 ORTHO05D008010 2.0e-112 409.8 327 62.4
arahy.Tifrunner.gnm1.ann1.GAE5DS Arachis hypogaea HOM05D006392 ORTHO05D008010 3.7e-111 405.6 311 65.0
FvH4_2g38390 Fragaria vesca HOM05D006392 ORTHO05D008010 3.7e-111 405.6 327 59.3
Sabra02G0018100 Salix brachista HOM05D006392 ORTHO05D008010 3.7e-111 405.6 361 55.1
arahy.Tifrunner.gnm1.ann1.8AJY4P Arachis hypogaea HOM05D006392 ORTHO05D008010 8.2e-111 404.4 311 64.6
Eucgr.F02661 Eucalyptus grandis HOM05D006392 ORTHO05D008010 2.4e-110 402.9 305 64.3
THA.LOC104809190 Tarenaya hassleriana HOM05D006392 ORTHO05D008010 5.3e-110 401.7 328 61.0
AL8G18870 Arabidopsis lyrata HOM05D006392 ORTHO05D008010 1.2e-109 400.6 328 59.1
VMungo1080G0965 Vigna mungo HOM05D006392 ORTHO05D008010 4.5e-109 398.7 302 64.6
AT5G42470 Arabidopsis thaliana HOM05D006392 ORTHO05D008010 2.9e-108 396.0 328 60.1
Sp7g07860 Schrenkiella parvula HOM05D006392 ORTHO05D008010 1.9e-107 393.3 328 58.2
Os06g0715600 Oryza sativa ssp. japonica HOM05D006392 ORTHO05D008010 2.5e-107 392.9 319 58.0
A06p48320 Brassica napus HOM05D006392 ORTHO05D008010 1.8e-105 386.7 328 58.8
Nitab4.5_0013390g0010 Nicotiana tabacum HOM05D006392 ORTHO05D008010 4.0e-105 385.6 326 58.3
BraA06t27702Z Brassica rapa HOM05D006392 ORTHO05D008010 5.2e-105 385.2 328 58.8
Carub.0008s0658 Capsella rubella HOM05D006392 ORTHO05D008010 5.2e-105 385.2 331 57.7
Thhalv10003229m.g Eutrema salsugineum HOM05D006392 ORTHO05D008010 1.1e-104 384.0 328 58.2
BcaC06g31757 Brassica carinata HOM05D006392 ORTHO05D008010 2.8e-103 379.4 330 57.0
FAN15G0959 Fragaria x ananassa HOM05D006392 ORTHO05D008010 1.1e-102 377.5 309 58.9
FAN20G2474 Fragaria x ananassa HOM05D006392 ORTHO05D008010 1.4e-102 377.1 308 59.4
BcaC02g10765 Brassica carinata HOM05D006392 ORTHO05D008010 5.3e-102 375.2 328 57.3
FAN27G1073 Fragaria x ananassa HOM05D006392 ORTHO05D008010 5.3e-102 375.2 308 59.1
vmacro07583 Vaccinium macrocarpon HOM05D006392 ORTHO05D008010 5.3e-102 375.2 281 64.4
MBI05_g07507_MAGBIO Magnolia biondii HOM05D006392 ORTHO05D008010 1.6e-101 373.6 328 56.4
C04p25370 Brassica napus HOM05D006392 ORTHO05D008010 1.3e-100 370.5 329 57.1
BolC4t24044H Brassica oleracea HOM05D006392 ORTHO05D008010 1.3e-100 370.5 329 57.1
SEGI_16132 Sequoiadendron giganteum HOM05D006392 ORTHO05D008010 2.9e-100 369.4 320 54.4
COL.COLO4_26140 Corchorus olitorius HOM05D006392 ORTHO05D008010 5.0e-100 368.6 287 60.3
Zm00001eb228060 Zea mays HOM05D006392 ORTHO05D008010 4.2e-99 365.5 323 56.0
Nn1g05904 Nelumbo nucifera HOM05D006392 ORTHO05D008010 1.6e-98 363.6 328 55.2
Peaxi162Scf00438g00835 Petunia axillaris HOM05D006392 ORTHO05D008010 3.6e-98 362.5 326 56.7
SGA_v2.0_scaffold11G05922 Striga asiatica HOM05D006392 ORTHO05D008010 2.3e-97 359.8 326 55.2
Hma1.2p1_0638F.1_g193910 Hydrangea macrophylla HOM05D006392 ORTHO05D008010 6.8e-97 358.2 336 54.5
Aa31LG9G12590 Aethionema arabicum HOM05D006392 ORTHO05D008010 9.8e-96 354.4 302 56.3
Actinidia16990 Actinidia chinensis HOM05D006392 ORTHO05D004187 1.3e-95 354.0 258 64.0
HPP92_024091 Vanilla planifolia HOM05D006392 ORTHO05D008010 1.4e-94 350.5 323 55.1
Duzib116G0836 Durio zibethinus HOM05D006392 ORTHO05D008010 2.9e-92 342.8 328 54.0
CDE04G0374 Ceratophyllum demersum HOM05D006392 ORTHO05D008010 3.8e-92 342.4 326 53.1
unitig_32.g11136 Utricularia gibba HOM05D006392 ORTHO05D008010 7.2e-91 338.2 287 57.8
Actinidia35835 Actinidia chinensis HOM05D006392 ORTHO05D008010 7.3e-83 311.6 326 52.1
MELO3C030484.2 Cucumis melo HOM05D006392 ORTHO05D008010 4.7e-82 308.9 365 47.9
Atru.chr13.285 Acer truncatum HOM05D006392 ORTHO05D008010 1.8e-81 307.0 321 49.2
MD11G1014100 Malus domestica HOM05D006392 ORTHO05D008010 6.8e-81 305.1 225 65.3
Mapoly0064s0103 Marchantia polymorpha HOM05D006392 ORTHO05D008010 1.4e-78 297.4 326 44.8
TPR.G17497 Trifolium pratense HOM05D006392 ORTHO05D008010 3.2e-78 296.2 206 68.9
Pp3c4_9730 Physcomitrium patens HOM05D006392 ORTHO05D008010 1.8e-73 280.4 327 45.3
AagrBONN_evm.TU.Sc2ySwM_117.3435 Anthoceros agrestis HOM05D006392 ORTHO05D008010 8.3e-71 271.6 328 43.3
Cc10_g01620 Coffea canephora HOM05D006392 ORTHO05D008010 9.5e-67 258.1 196 61.7
SMO196G0156 Selaginella moellendorffii HOM05D006392 ORTHO05D008010 3.1e-65 253.1 324 41.7
Glyma.15G275100 Glycine max HOM05D006392 ORTHO05D008010 3.7e-63 246.1 172 67.4
CBR_g23034 Chara braunii HOM05D006392 ORTHO05D008010 1.3e-55 221.1 343 35.0
Ah.11g039750 Amaranthus hybridus HOM05D006392 ORTHO05D008010 3.8e-55 219.5 151 70.9
CARHR181930 Cardamine hirsuta HOM05D006392 ORTHO05D008010 1.4e-54 217.6 163 63.8
Aqoxy4G01015 Aquilegia oxysepala HOM05D006392 ORTHO05D008010 4.3e-51 206.1 170 57.6
Cc10_g01630 Coffea canephora HOM05D006392 ORTHO05D008010 1.7e-44 184.1 128 68.0
Actinidia27159 Actinidia chinensis HOM05D006392 ORTHO05D008010 1.1e-30 138.3 233 36.5
RcHm_v2.0_Chr4g0398161 Rosa chinensis HOM05D006392 ORTHO05D008010 3.2e-30 136.7 90 75.6
RcHm_v2.0_Chr4g0398171 Rosa chinensis HOM05D006392 ORTHO05D008010 7.4e-27 125.6 111 50.5
TPR.G29580 Trifolium pratense HOM05D006392 ORTHO05D008010 1.6e-26 124.4 120 50.8
Zm00001eb340150 Zea mays HOM05D006392 ORTHO05D008010 9.7e-11 72.0 81 44.4


User provided reference genes

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