Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sc02g0007890 Simmondsia chinensis HOM05D006958 ORTHO05D008814 1.3e-196 689.5 344 100.0
Dinv39219 Davidia involucrata HOM05D006958 ORTHO05D008814 1.6e-122 443.4 338 66.0
Rhsim06G0062400 Rhododendron simsii HOM05D006958 ORTHO05D008814 5.3e-121 438.3 339 65.8
Actinidia10201 Actinidia chinensis HOM05D006958 ORTHO05D008814 1.3e-119 433.7 340 65.3
CSS0020437 Camellia sinensis var. sinensis HOM05D006958 ORTHO05D008814 1.7e-119 433.3 338 66.0
CSS0026693 Camellia sinensis var. sinensis HOM05D006958 ORTHO05D008814 3.5e-117 425.6 338 65.4
Actinidia22696 Actinidia chinensis HOM05D006958 ORTHO05D008814 4.6e-117 425.2 335 64.2
Hund05299 Selenicereus undatus HOM05D006958 ORTHO05D008814 3.3e-115 419.1 343 63.8
TAR376G0445 Trochodendron aralioides HOM05D006958 ORTHO05D008814 1.3e-114 417.2 346 59.5
Atru.chr13.835 Acer truncatum HOM05D006958 ORTHO05D008814 6.9e-113 411.4 340 60.9
Manes.18G046700 Manihot esculenta HOM05D006958 ORTHO05D008814 9.0e-113 411.0 341 59.8
Thecc.08G088500 Theobroma cacao HOM05D006958 ORTHO05D008814 2.2e-111 406.4 340 60.0
TWI12G1073 Tripterygium wilfordii HOM05D006958 ORTHO05D008814 3.2e-110 402.5 342 59.9
Prupe.1G422600 Prunus persica HOM05D006958 ORTHO05D008814 5.5e-110 401.7 340 59.4
Duzib093G1923 Durio zibethinus HOM05D006958 ORTHO05D008814 7.2e-110 401.4 340 59.4
Eucgr.F02250 Eucalyptus grandis HOM05D006958 ORTHO05D008814 7.2e-110 401.4 341 59.2
CANSAT25G3409 Cannabis sativa HOM05D006958 ORTHO05D008814 2.1e-109 399.8 339 59.6
Ciclev10001733m.g Citrus clementina HOM05D006958 ORTHO05D008814 7.9e-109 397.9 338 58.3
RcHm_v2.0_Chr6g0309651 Rosa chinensis HOM05D006958 ORTHO05D008814 1.0e-108 397.5 338 59.5
MD15G1069100 Malus domestica HOM05D006958 ORTHO05D008814 3.9e-108 395.6 341 60.4
Gorai.009G220300 Gossypium raimondii HOM05D006958 ORTHO05D008814 5.1e-108 395.2 340 58.8
COL.COLO4_28503 Corchorus olitorius HOM05D006958 ORTHO05D008814 2.0e-107 393.3 338 58.3
Gohir.D05G213600 Gossypium hirsutum HOM05D006958 ORTHO05D008814 4.3e-107 392.1 342 58.5
CiPaw.07G174600 Carya illinoinensis HOM05D006958 ORTHO05D008814 2.2e-106 389.8 341 58.7
THA.LOC104816754 Tarenaya hassleriana HOM05D006958 ORTHO05D008814 4.8e-106 388.7 342 57.3
ClCG08G016520 Citrullus lanatus HOM05D006958 ORTHO05D008814 1.1e-105 387.5 338 56.8
QL12p038133 Quercus lobata HOM05D006958 ORTHO05D008814 2.4e-105 386.3 343 56.6
Haze_22433 Corylus avellana HOM05D006958 ORTHO05D008814 3.1e-105 386.0 339 56.3
arahy.Tifrunner.gnm1.ann1.JFD9T8 Arachis hypogaea HOM05D006958 ORTHO05D008814 4.1e-105 385.6 337 58.2
FAN27G0228 Fragaria x ananassa HOM05D006958 ORTHO05D008814 5.3e-105 385.2 341 58.4
FvH4_2g33060 Fragaria vesca HOM05D006958 ORTHO05D008814 1.2e-104 384.0 337 59.1
Potri.002G118300 Populus trichocarpa HOM05D006958 ORTHO05D008814 2.0e-104 383.3 338 58.0
FAN15G0662 Fragaria x ananassa HOM05D006958 ORTHO05D008814 3.4e-104 382.5 337 58.5
Lalb_Chr14g0368181 Lupinus albus HOM05D006958 ORTHO05D008814 5.0e-103 378.6 339 58.4
Cfa013775 Carpinus fangiana HOM05D006958 ORTHO05D008814 6.5e-103 378.3 340 55.3
FAN24G2490 Fragaria x ananassa HOM05D006958 ORTHO05D008814 6.5e-103 378.3 341 58.1
Sed0002112 Sechium edule HOM05D006958 ORTHO05D008814 1.4e-102 377.1 336 56.5
CsaV3_2G026090 Cucumis sativus L. HOM05D006958 ORTHO05D008814 3.6e-101 372.5 340 55.9
FAN20G1263 Fragaria x ananassa HOM05D006958 ORTHO05D008814 6.1e-101 371.7 353 55.8
MBI16_g23890_MAGBIO Magnolia biondii HOM05D006958 ORTHO05D008814 1.4e-100 370.5 345 57.1
Nitab4.5_0002484g0050 Nicotiana tabacum HOM05D006958 ORTHO05D008814 1.4e-100 370.5 335 57.9
Migut.N02783 Erythranthe guttata HOM05D006958 ORTHO05D008814 8.8e-100 367.9 337 55.8
PGR031G1511 Punica granatum HOM05D006958 ORTHO05D008814 8.8e-100 367.9 338 55.6
Sopen04g031420 Solanum pennellii HOM05D006958 ORTHO05D008814 8.8e-100 367.9 337 57.3
HanXRQChr08g0229631 Helianthus annuus HOM05D006958 ORTHO05D008814 3.3e-99 365.9 343 56.3
Solyc04g077820.4 Solanum lycopersicum HOM05D006958 ORTHO05D008814 3.3e-99 365.9 335 57.3
MELO3C010802.2 Cucumis melo HOM05D006958 ORTHO05D008814 4.4e-99 365.5 340 55.0
Lj4A758G77 Lonicera japonica HOM05D006958 ORTHO05D008814 9.7e-99 364.4 373 51.5
SGA_v2.0_scaffold28G11833 Striga asiatica HOM05D006958 ORTHO05D008814 1.3e-98 364.0 336 56.8
Thhalv10023590m.g Eutrema salsugineum HOM05D006958 ORTHO05D008814 4.8e-98 362.1 338 54.7
CAN.G724.27 Capsicum annuum HOM05D006958 ORTHO05D008814 6.3e-98 361.7 335 57.6
Lsat_1_v5_gn_6_110920 Lactuca sativa HOM05D006958 ORTHO05D008814 1.4e-97 360.5 346 54.0
Glyma.14G089018 Glycine max HOM05D006958 ORTHO05D008814 1.8e-97 360.1 337 56.4
Nitab4.5_0004654g0020 Nicotiana tabacum HOM05D006958 ORTHO05D008814 3.1e-97 359.4 335 56.4
MSTRG.24376 Avicennia marina HOM05D006958 ORTHO05D008814 2.6e-96 356.3 349 54.2
Carub.0002s0585 Capsella rubella HOM05D006958 ORTHO05D008814 2.6e-96 356.3 331 55.6
CARHR283790 Cardamine hirsuta HOM05D006958 ORTHO05D008814 2.6e-96 356.3 332 56.0
Lj5g0000926 Lotus japonicus HOM05D006958 ORTHO05D008814 4.5e-96 355.5 344 54.7
EL10Ac1g02379 Beta vulgaris HOM05D006958 ORTHO05D008814 7.7e-96 354.8 270 65.6
AL2G17470 Arabidopsis lyrata HOM05D006958 ORTHO05D008814 1.0e-95 354.4 331 55.9
Cpa.g.sc142.28 Carica papaya HOM05D006958 ORTHO05D008814 6.5e-95 351.7 272 61.8
PGSC0003DMG400010608 Solanum tuberosum HOM05D006958 ORTHO05D008814 6.5e-95 351.7 348 54.6
AT1G59600 Arabidopsis thaliana HOM05D006958 ORTHO05D008814 8.5e-95 351.3 331 55.3
C01p36350 Brassica napus HOM05D006958 ORTHO05D008814 1.1e-94 350.9 335 54.0
Ca_13215_v3 Cicer arietinum L. HOM05D006958 ORTHO05D008814 1.9e-94 350.1 340 54.7
BolC1t03593H Brassica oleracea HOM05D006958 ORTHO05D008814 4.2e-94 349.0 335 54.3
arahy.Tifrunner.gnm1.ann1.8TQ0W2 Arachis hypogaea HOM05D006958 ORTHO05D008814 6.1e-93 345.1 337 54.3
Sp2g04980 Schrenkiella parvula HOM05D006958 ORTHO05D008814 3.0e-92 342.8 339 53.1
TPR.G37796 Trifolium pratense HOM05D006958 ORTHO05D008814 3.0e-92 342.8 343 54.2
BcaB04g20216 Brassica carinata HOM05D006958 ORTHO05D008814 1.5e-91 340.5 337 53.4
A01p28700 Brassica napus HOM05D006958 ORTHO05D008814 1.5e-91 340.5 335 52.5
Medtr1g018000 Medicago truncatula HOM05D006958 ORTHO05D008814 3.3e-91 339.3 343 53.4
BraA01t03033Z Brassica rapa HOM05D006958 ORTHO05D008814 5.7e-91 338.6 335 52.2
Peaxi162Scf00081g02114 Petunia axillaris HOM05D006958 ORTHO05D008814 4.1e-89 332.4 337 51.9
ECA246G2880 Erigeron canadensis HOM05D006958 ORTHO05D008814 1.6e-88 330.5 280 60.0
Gohir.A05G210300 Gossypium hirsutum HOM05D006958 ORTHO05D008814 2.7e-88 329.7 275 60.7
ATR0739G011 Amborella trichopoda HOM05D006958 ORTHO05D008814 3.5e-88 329.3 350 51.4
Aqoxy6G02602 Aquilegia oxysepala HOM05D006958 ORTHO05D008814 5.9e-88 328.6 341 49.9
PSO675G0096 Papaver somniferum HOM05D006958 ORTHO05D008814 6.5e-87 325.1 344 49.4
PSO541G2153 Papaver somniferum HOM05D006958 ORTHO05D008814 1.1e-86 324.3 347 50.1
unitig_744.g24127 Utricularia gibba HOM05D006958 ORTHO05D008814 1.5e-86 323.9 317 51.4
Aa31LG2G10550 Aethionema arabicum HOM05D006958 ORTHO05D008814 9.4e-86 321.2 418 45.0
Phvul.001G028000 Phaseolus vulgaris HOM05D006958 ORTHO05D008814 3.6e-85 319.3 336 50.6
HPP92_009523 Vanilla planifolia HOM05D006958 ORTHO05D008814 2.6e-83 313.2 339 49.9
VMungo0647G0836 Vigna mungo HOM05D006958 ORTHO05D008814 2.6e-83 313.2 334 50.3
DCAR_020049 Daucus carota HOM05D006958 ORTHO05D008814 1.3e-82 310.8 337 50.1
PSO541G3524 Papaver somniferum HOM05D006958 ORTHO05D008814 2.0e-80 303.5 307 51.1
Zm00001eb325900 Zea mays HOM05D006958 ORTHO05D008814 5.5e-78 295.4 343 48.1
GSVIVG01009341001 Vitis vinifera HOM05D006958 ORTHO05D008814 6.1e-77 292.0 214 67.3
Cc10_g05800 Coffea canephora HOM05D006958 ORTHO05D008814 1.6e-72 277.3 214 64.5
CDE04G0359 Ceratophyllum demersum HOM05D006958 ORTHO05D008814 5.6e-62 242.3 232 53.9
Psat6g018160 Pisum sativum HOM05D006958 ORTHO05D008814 3.5e-56 223.0 302 45.4
Pp3c12_1620 Physcomitrium patens HOM05D006958 ORTHO05D008814 3.9e-55 219.5 343 38.5
AUR62022479 Chenopodium quinoa HOM05D006958 ORTHO05D008814 2.3e-52 210.3 166 60.2
HPP92_009559 Vanilla planifolia HOM05D006958 ORTHO05D008814 9.9e-43 178.3 191 52.9
Oeu049903.1 Olea europaea HOM05D006958 ORTHO05D008814 4.0e-36 156.4 164 46.3
AUR62022480 Chenopodium quinoa HOM05D006958 ORTHO05D008814 3.4e-35 153.3 128 60.2
CBR_g51257 Chara braunii HOM05D006958 ORTHO05D008814 3.8e-34 149.8 330 33.0
SMO334G0101 Selaginella moellendorffii HOM05D006958 ORTHO05D008814 6.4e-34 149.1 271 34.3
arahy.Tifrunner.gnm1.ann1.D1UQZZ Arachis hypogaea HOM05D006958 ORTHO05D008814 8.4e-34 148.7 273 34.8
Os01g0593100 Oryza sativa ssp. japonica HOM05D006958 ORTHO05D008814 7.1e-33 145.6 202 43.1
BolC4t24190H Brassica oleracea HOM05D006958 ORTHO05D008814 5.1e-31 139.4 132 56.8
Os07g0586000 Oryza sativa ssp. japonica HOM05D006958 ORTHO05D008814 3.3e-30 136.7 163 44.8
MBI15_g25904_MAGBIO Magnolia biondii HOM05D006958 ORTHO05D017181 4.9e-26 122.9 125 56.8
SEGI_02529 Sequoiadendron giganteum HOM05D006958 ORTHO05D008814 1.9e-25 120.9 183 36.1
C04p26140 Brassica napus HOM05D006958 ORTHO05D008814 4.2e-25 119.8 110 57.3
Cfa010280 Carpinus fangiana HOM05D006958 ORTHO05D008814 7.9e-24 115.5 95 60.0
BcaC02g10644 Brassica carinata HOM05D006958 ORTHO05D008814 8.7e-23 112.1 178 42.1
SEGI_26692 Sequoiadendron giganteum HOM05D006958 ORTHO05D008814 6.7e-15 85.9 83 47.0
EL10Ac1g02376 Beta vulgaris HOM05D006958 ORTHO05D008814 2.1e-13 80.9 66 62.1
Psat7g107960 Pisum sativum HOM05D006958 ORTHO05D008814 3.8e-10 70.1 98 42.9
Nn5g30604 Nelumbo nucifera HOM05D006958 ORTHO05D008814 1.0e-07 62.0 74 44.6
Psat0s3396g0160 Pisum sativum HOM05D006958 ORTHO05D008814 1.3e-07 61.6 41 63.4
Glyma.07G264001 Glycine max HOM05D006958 ORTHO05D008814 5.7e-06 56.2 75 45.3


User provided reference genes

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