Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sc02g0007630 Simmondsia chinensis HOM05D001948 ORTHO05D001873 1.6e-65 252.7 130 100.0
Dinv35908 Davidia involucrata HOM05D001948 ORTHO05D001873 5.4e-26 121.3 108 60.2
Rhsim07G0222600 Rhododendron simsii HOM05D001948 ORTHO05D001873 1.0e-24 117.1 109 59.6
GSVIVG01009392001 Vitis vinifera HOM05D001948 ORTHO05D001873 1.3e-24 116.7 108 56.5
Actinidia38090 Actinidia chinensis HOM05D001948 ORTHO05D001873 2.5e-23 112.5 108 61.1
Manes.18G043400 Manihot esculenta HOM05D001948 ORTHO05D001873 2.1e-22 109.4 108 52.8
QL02p002890 Quercus lobata HOM05D001948 ORTHO05D001873 3.6e-22 108.6 108 54.6
vmacro04576 Vaccinium macrocarpon HOM05D001948 ORTHO05D001873 8.1e-22 107.5 109 55.0
Actinidia13032 Actinidia chinensis HOM05D001948 ORTHO05D001873 1.8e-21 106.3 108 58.3
Duzib093G1167 Durio zibethinus HOM05D001948 ORTHO05D001873 2.6e-20 102.4 111 50.5
MD15G1074300 Malus domestica HOM05D001948 ORTHO05D001873 3.4e-20 102.1 109 54.1
CSS0028423 Camellia sinensis var. sinensis HOM05D001948 ORTHO05D001873 4.4e-20 101.7 109 56.9
Atru.chr13.785 Acer truncatum HOM05D001948 ORTHO05D001873 5.8e-20 101.3 108 50.0
Cc10_g05330 Coffea canephora HOM05D001948 ORTHO05D001873 5.8e-20 101.3 108 55.6
Sabra14G0014000 Salix brachista HOM05D001948 ORTHO05D001873 7.6e-20 100.9 108 52.8
CiPaw.15G048600 Carya illinoinensis HOM05D001948 ORTHO05D001873 9.9e-20 100.5 108 50.9
TWI09G1266 Tripterygium wilfordii HOM05D001948 ORTHO05D001873 9.9e-20 100.5 109 52.3
TAR625G0918 Trochodendron aralioides HOM05D001948 ORTHO05D001873 2.9e-19 99.0 108 53.7
Potri.014G020900 Populus trichocarpa HOM05D001948 ORTHO05D001873 3.8e-19 98.6 108 53.7
Nn1g04652 Nelumbo nucifera HOM05D001948 ORTHO05D001873 6.4e-19 97.8 108 50.0
Nn2g14695 Nelumbo nucifera HOM05D000084 ORTHO05D002966 6.4e-19 97.8 108 50.0
Thecc.08G093900 Theobroma cacao HOM05D001948 ORTHO05D001873 1.1e-18 97.1 115 50.4
Ciclev10003482m.g Citrus clementina HOM05D001948 ORTHO05D001873 1.2e-17 93.6 110 47.3
Gohir.D02G089800 Gossypium hirsutum HOM05D001948 ORTHO05D001873 1.2e-17 93.6 115 48.7
Nn5g30467 Nelumbo nucifera HOM05D001948 ORTHO05D001873 1.6e-17 93.2 110 53.6
MD08G1089900 Malus domestica HOM05D001948 ORTHO05D001873 2.7e-17 92.4 109 48.6
CiPaw.16G034800 Carya illinoinensis HOM05D001948 ORTHO05D001873 3.5e-17 92.0 109 47.7
Haze_18098 Corylus avellana HOM05D001948 ORTHO05D001873 3.5e-17 92.0 108 47.2
Gohir.A02G081800 Gossypium hirsutum HOM05D001948 ORTHO05D001873 3.5e-17 92.0 115 48.7
PSO675G6254 Papaver somniferum HOM05D001948 ORTHO05D001873 7.8e-17 90.9 111 47.7
Duzib116G0564 Durio zibethinus HOM05D001948 ORTHO05D001873 3.0e-16 89.0 114 46.5
PGR083G0798 Punica granatum HOM05D001948 ORTHO05D001873 1.1e-15 87.0 109 45.9
Eucgr.F00142 Eucalyptus grandis HOM05D001948 ORTHO05D001873 3.3e-15 85.5 109 45.0
COL.COLO4_28563 Corchorus olitorius HOM05D001948 ORTHO05D001873 4.3e-15 85.1 108 50.0
FAN20G1070 Fragaria x ananassa HOM05D001948 ORTHO05D001873 4.3e-15 85.1 110 46.4
Gorai.005G100500 Gossypium raimondii HOM05D001948 ORTHO05D001873 5.6e-15 84.7 114 46.5
RcHm_v2.0_Chr6g0309061 Rosa chinensis HOM05D001948 ORTHO05D001873 9.6e-15 84.0 108 46.3
CANSAT25G1733 Cannabis sativa HOM05D001948 ORTHO05D001873 1.3e-14 83.6 109 48.6
Dinv26886 Davidia involucrata HOM05D001948 ORTHO05D001873 1.3e-14 83.6 111 45.0
FAN27G0653 Fragaria x ananassa HOM05D001948 ORTHO05D001873 1.3e-14 83.6 110 45.5
Prupe.1G427200 Prunus persica HOM05D001948 ORTHO05D001873 1.6e-14 83.2 109 47.7
FvH4_2g33452 Fragaria vesca HOM05D001948 ORTHO05D001873 6.2e-14 81.3 108 46.3
GSVIVG01000174001 Vitis vinifera HOM05D001948 ORTHO05D001873 8.1e-14 80.9 112 48.2
Nitab4.5_0003643g0010 Nicotiana tabacum HOM05D001948 ORTHO05D001873 1.8e-13 79.7 107 47.7
FAN15G2277 Fragaria x ananassa HOM05D000232 ORTHO05D001873 3.1e-13 79.0 110 45.5
Nitab4.5_0000569g0140 Nicotiana tabacum HOM05D001948 ORTHO05D001873 3.1e-13 79.0 107 49.5
CDE04G1335 Ceratophyllum demersum HOM05D001948 ORTHO05D001873 7.6e-12 74.3 103 43.7
CDE07G1689 Ceratophyllum demersum HOM05D001948 ORTHO05D001873 9.9e-12 73.9 103 41.7
Lj4A67T55 Lonicera japonica HOM05D001948 ORTHO05D001873 1.4e-10 70.1 108 43.5
Cc07_g06620 Coffea canephora HOM05D001948 ORTHO05D001873 3.2e-10 68.9 105 41.0
Gohir.D03G026000 Gossypium hirsutum HOM05D001948 ORTHO05D001873 3.2e-10 68.9 107 41.1
Rhsim08G0096900 Rhododendron simsii HOM05D001948 ORTHO05D001873 3.2e-10 68.9 107 43.9
Gorai.003G027700 Gossypium raimondii HOM05D001948 ORTHO05D001873 7.1e-10 67.8 107 42.1
Phvul.009G069600 Phaseolus vulgaris HOM05D001948 ORTHO05D001873 9.3e-10 67.4 107 39.3
Aqoxy6G02827 Aquilegia oxysepala HOM05D001948 ORTHO05D001873 1.2e-09 67.0 108 41.7
VMungo1309G0388 Vigna mungo HOM05D003061 ORTHO05D003427 3.5e-09 65.5 108 38.9
vmacro17979 Vaccinium macrocarpon HOM05D001948 ORTHO05D001873 6.0e-09 64.7 104 38.5
THA.LOC104825753 Tarenaya hassleriana HOM05D001948 ORTHO05D001873 2.3e-08 62.8 103 39.8
Actinidia21243 Actinidia chinensis HOM05D001948 ORTHO05D001873 3.9e-08 62.0 111 40.5
Lalb_Chr08g0245451 Lupinus albus HOM05D001948 ORTHO05D001873 3.9e-08 62.0 111 38.7
Ca_13237_v3 Cicer arietinum L. HOM05D001948 ORTHO05D001873 1.9e-07 59.7 109 42.2
Duzib187G1061 Durio zibethinus HOM05D001948 ORTHO05D001873 3.3e-07 58.9 109 37.6
Glyma.06G044100 Glycine max HOM05D001948 ORTHO05D001873 4.3e-07 58.5 112 36.6
Carub.0007s1687 Capsella rubella HOM05D001948 ORTHO05D001873 5.6e-07 58.2 103 36.9
Lj5g0009546 Lotus japonicus HOM05D001948 ORTHO05D001873 9.6e-07 57.4 111 38.7
Cfa004081 Carpinus fangiana HOM05D001948 ORTHO05D001873 2.1e-06 56.2 122 35.2
Thhalv10027110m.g Eutrema salsugineum HOM05D001948 ORTHO05D001873 2.1e-06 56.2 65 43.1
RcHm_v2.0_Chr2g0107111 Rosa chinensis HOM05D001948 ORTHO05D001873 2.1e-06 56.2 115 36.5
BcaC09g50897 Brassica carinata HOM05D001948 ORTHO05D001873 3.6e-06 55.5 68 41.2
Psat6g014360 Pisum sativum HOM05D001948 ORTHO05D001873 3.6e-06 55.5 115 36.5


User provided reference genes

Program Settings