Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sc02g0006720 Simmondsia chinensis HOM05D008210 ORTHO05D010078 4.2e-43 177.9 112 100.0
MSTRG.22279 Avicennia marina HOM05D008210 ORTHO05D010078 4.4e-08 61.6 73 49.3
QL02p006968 Quercus lobata HOM05D008210 ORTHO05D010078 9.8e-08 60.5 69 47.8
arahy.Tifrunner.gnm1.ann1.KBQ6U1 Arachis hypogaea HOM05D008210 ORTHO05D010078 1.7e-07 59.7 71 49.3
Lsat_1_v5_gn_1_19601 Lactuca sativa HOM05D008210 ORTHO05D010078 2.2e-07 59.3 70 47.1
COL.COLO4_26398 Corchorus olitorius HOM05D008210 ORTHO05D010078 2.8e-07 58.9 72 50.0
Hma1.2p1_0023F.1_g015200 Hydrangea macrophylla HOM05D008210 ORTHO05D010078 6.3e-07 57.8 62 46.8
Rhsim06G0039800 Rhododendron simsii HOM05D008210 ORTHO05D010078 6.3e-07 57.8 70 45.7
Thecc.08G019400 Theobroma cacao HOM05D008210 ORTHO05D010078 6.3e-07 57.8 68 47.1
Medtr3g111460 Medicago truncatula HOM05D008210 ORTHO05D010078 8.3e-07 57.4 70 47.1
Gorai.010G013900 Gossypium raimondii HOM05D008210 ORTHO05D010078 1.4e-06 56.6 76 46.1
Ah.09g236870 Amaranthus hybridus HOM05D008210 ORTHO05D010078 1.8e-06 56.2 75 45.3
Ah.09g236890 Amaranthus hybridus HOM05D008210 ORTHO05D010078 1.8e-06 56.2 75 45.3
Aqoxy2G03320 Aquilegia oxysepala HOM05D008210 ORTHO05D010078 1.8e-06 56.2 71 42.3
Aqoxy6G00952 Aquilegia oxysepala HOM05D008210 ORTHO05D010078 1.8e-06 56.2 71 42.3
TPR.G12346 Trifolium pratense HOM05D008210 ORTHO05D010078 1.8e-06 56.2 68 44.1
VMungo1309G3066 Vigna mungo HOM05D008210 ORTHO05D010078 1.8e-06 56.2 70 50.0
Nitab4.5_0000110g0010 Nicotiana tabacum HOM05D008210 ORTHO05D010078 2.4e-06 55.8 73 45.2
Haze_17600 Corylus avellana HOM05D008210 ORTHO05D010078 3.1e-06 55.5 70 45.7
Psat0s3268g0120 Pisum sativum HOM05D008210 ORTHO05D010078 4.1e-06 55.1 70 47.1
Glyma.04G035200 Glycine max HOM05D008210 ORTHO05D010078 5.4e-06 54.7 70 48.6
Phvul.009G061375 Phaseolus vulgaris HOM05D008210 ORTHO05D010078 7.0e-06 54.3 70 48.6


User provided reference genes

Program Settings