Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sc02g0006160 Simmondsia chinensis HOM05D006598 ORTHO05D008132 2.6e-225 785.0 391 100.0
Dinv36084 Davidia involucrata HOM05D006598 ORTHO05D008132 2.7e-145 519.2 334 74.6
Dinv39426 Davidia involucrata HOM05D006598 ORTHO05D008132 8.1e-142 507.7 321 76.6
Cfa018154 Carpinus fangiana HOM05D006598 ORTHO05D008132 8.9e-141 504.2 321 75.4
Haze_17965 Corylus avellana HOM05D006598 ORTHO05D008132 2.6e-140 502.7 331 73.7
Prupe.1G379200 Prunus persica HOM05D006598 ORTHO05D008132 2.6e-140 502.7 321 73.8
FvH4_2g39790 Fragaria vesca HOM05D006598 ORTHO05D008132 1.3e-139 500.4 321 73.2
FAN20G2142 Fragaria x ananassa HOM05D006598 ORTHO05D008132 1.3e-139 500.4 321 73.2
FAN27G1472 Fragaria x ananassa HOM05D006598 ORTHO05D008132 2.9e-139 499.2 321 72.9
QL02p008626 Quercus lobata HOM05D006598 ORTHO05D008132 2.9e-139 499.2 330 72.4
FAN15G1256 Fragaria x ananassa HOM05D006598 ORTHO05D008132 1.1e-138 497.3 321 72.6
CSS0023084 Camellia sinensis var. sinensis HOM05D006598 ORTHO05D008132 3.2e-138 495.7 318 75.2
Hund26575 Selenicereus undatus HOM05D006598 ORTHO05D008132 4.1e-138 495.4 319 73.4
CiPaw.15G078300 Carya illinoinensis HOM05D006598 ORTHO05D008132 5.4e-138 495.0 330 72.1
Atru.chr13.478 Acer truncatum HOM05D006598 ORTHO05D008132 9.2e-138 494.2 321 73.5
AUR62035446 Chenopodium quinoa HOM05D006598 ORTHO05D008132 3.5e-137 492.3 321 72.9
TAR625G1490 Trochodendron aralioides HOM05D006598 ORTHO05D008132 7.8e-137 491.1 327 73.4
vmacro04528 Vaccinium macrocarpon HOM05D006598 ORTHO05D008132 7.8e-137 491.1 319 73.0
Ah.11g043150 Amaranthus hybridus HOM05D006598 ORTHO05D008132 1.0e-136 490.7 323 72.1
CSS0013932 Camellia sinensis var. sinensis HOM05D006598 ORTHO05D008132 1.7e-136 490.0 322 72.7
GSVIVG01009711001 Vitis vinifera HOM05D006598 ORTHO05D008132 3.0e-136 489.2 327 71.6
Rhsim07G0239600 Rhododendron simsii HOM05D006598 ORTHO05D008132 3.9e-136 488.8 319 72.1
Potri.002G260300 Populus trichocarpa HOM05D006598 ORTHO05D008132 5.1e-136 488.4 322 72.7
Actinidia38007 Actinidia chinensis HOM05D006598 ORTHO05D008132 1.9e-135 486.5 318 73.0
Manes.18G026900 Manihot esculenta HOM05D006598 ORTHO05D008132 1.9e-135 486.5 318 73.6
CANSAT25G2965 Cannabis sativa HOM05D006598 ORTHO05D008132 5.6e-135 485.0 321 72.9
Ciclev10001322m.g Citrus clementina HOM05D006598 ORTHO05D008132 7.3e-135 484.6 321 72.0
Sabra02G0198100 Salix brachista HOM05D006598 ORTHO05D008132 7.3e-135 484.6 322 72.4
vmacro21641 Vaccinium macrocarpon HOM05D006598 ORTHO05D008132 1.2e-134 483.8 318 73.6
Lj4A39T66 Lonicera japonica HOM05D006598 ORTHO05D008132 2.1e-134 483.0 321 73.8
Cc10_g02850 Coffea canephora HOM05D006598 ORTHO05D008132 6.2e-134 481.5 321 71.0
Rhsim06G0033600 Rhododendron simsii HOM05D006598 ORTHO05D008132 1.1e-133 480.7 327 70.6
Glyma.04G032000 Glycine max HOM05D006598 ORTHO05D008132 2.6e-132 476.1 318 70.4
Actinidia15332 Actinidia chinensis HOM05D006598 ORTHO05D008132 4.4e-132 475.3 321 71.0
Medtr3g111840 Medicago truncatula HOM05D006598 ORTHO05D008132 4.4e-132 475.3 318 71.7
Duzib116G0116 Durio zibethinus HOM05D006598 ORTHO05D008132 7.6e-132 474.6 319 71.8
Eucgr.F01894 Eucalyptus grandis HOM05D006598 ORTHO05D008132 1.7e-131 473.4 316 70.3
MBI16_g31005_MAGBIO Magnolia biondii HOM05D006598 ORTHO05D008132 2.2e-131 473.0 318 71.1
Ca_15516_v3 Cicer arietinum L. HOM05D006598 ORTHO05D008132 2.9e-131 472.6 318 70.4
PSO541G3348 Papaver somniferum HOM05D006598 ORTHO05D008132 6.4e-131 471.5 321 68.8
COL.COLO4_26313 Corchorus olitorius HOM05D006598 ORTHO05D008132 1.1e-130 470.7 320 71.9
arahy.Tifrunner.gnm1.ann1.9Y7K4V Arachis hypogaea HOM05D006598 ORTHO05D008132 2.4e-130 469.5 319 69.9
Cpa.g.sc36.79 Carica papaya HOM05D006598 ORTHO05D008132 3.2e-130 469.2 327 69.4
ECA232G3558 Erigeron canadensis HOM05D006598 ORTHO05D008132 4.2e-130 468.8 315 70.8
Aqoxy6G01111 Aquilegia oxysepala HOM05D006598 ORTHO05D008132 7.1e-130 468.0 319 70.2
PSO675G7094 Papaver somniferum HOM05D006598 ORTHO05D008132 7.1e-130 468.0 318 68.9
TPR.G12344 Trifolium pratense HOM05D006598 ORTHO05D008132 7.1e-130 468.0 318 70.4
Glyma.06G032100 Glycine max HOM05D006598 ORTHO05D008132 9.3e-130 467.6 316 70.3
TAR628G1208 Trochodendron aralioides HOM05D006598 ORTHO05D008132 2.7e-129 466.1 303 73.9
arahy.Tifrunner.gnm1.ann1.KF7WGB Arachis hypogaea HOM05D006598 ORTHO05D008132 6.0e-129 464.9 319 69.3
Phvul.009G057800 Phaseolus vulgaris HOM05D006598 ORTHO05D008132 6.0e-129 464.9 318 69.2
Psat5g017160 Pisum sativum HOM05D006598 ORTHO05D008132 3.9e-128 462.2 319 69.9
CAN.G1226.16 Capsicum annuum HOM05D006598 ORTHO05D008132 8.7e-128 461.1 313 68.4
PGSC0003DMG400003679 Solanum tuberosum HOM05D006598 ORTHO05D008132 1.5e-127 460.3 313 68.7
MSTRG.25174 Avicennia marina HOM05D006598 ORTHO05D008132 2.5e-127 459.5 327 68.2
Lj1g0003551 Lotus japonicus HOM05D006598 ORTHO05D008132 3.3e-127 459.1 317 69.7
VMungo1309G1899 Vigna mungo HOM05D006598 ORTHO05D008132 5.6e-127 458.4 318 68.6
SalBow7G0748 Salvia bowleyana HOM05D006598 ORTHO05D008132 7.3e-127 458.0 323 67.2
Migut.C00732 Erythranthe guttata HOM05D006598 ORTHO05D008132 1.3e-126 457.2 321 67.3
PGR031G2630 Punica granatum HOM05D006598 ORTHO05D008132 1.3e-126 457.2 321 67.3
Nitab4.5_0010510g0030 Nicotiana tabacum HOM05D006598 ORTHO05D008132 8.1e-126 454.5 313 69.6
C04p24910 Brassica napus HOM05D006598 ORTHO05D008132 1.1e-125 454.1 327 66.7
BolC4t23991H Brassica oleracea HOM05D006598 ORTHO05D008132 1.1e-125 454.1 327 66.7
Sopen04g033970 Solanum pennellii HOM05D006598 ORTHO05D008132 1.4e-125 453.8 313 68.4
Sed0027447 Sechium edule HOM05D006598 ORTHO05D008132 1.8e-125 453.4 311 69.8
Solyc04g080380.3 Solanum lycopersicum HOM05D006598 ORTHO05D008132 3.1e-125 452.6 313 68.1
BcaC02g10811 Brassica carinata HOM05D006598 ORTHO05D008132 5.3e-125 451.8 319 68.0
A06p48250 Brassica napus HOM05D006598 ORTHO05D008132 2.0e-124 449.9 319 67.7
BraA06t27693Z Brassica rapa HOM05D006598 ORTHO05D008132 2.0e-124 449.9 319 67.7
TWI36G0987 Tripterygium wilfordii HOM05D006598 ORTHO05D008132 2.6e-124 449.5 319 68.7
AL8G18360 Arabidopsis lyrata HOM05D006598 ORTHO05D008132 5.8e-124 448.4 331 65.6
BcaC06g31749 Brassica carinata HOM05D006598 ORTHO05D008132 9.9e-124 447.6 319 67.1
Thhalv10003240m.g Eutrema salsugineum HOM05D006598 ORTHO05D008132 9.9e-124 447.6 323 66.6
Sp2g07390 Schrenkiella parvula HOM05D006598 ORTHO05D008132 2.2e-123 446.4 319 67.7
CARHR181720 Cardamine hirsuta HOM05D006598 ORTHO05D008132 4.9e-123 445.3 327 65.1
Nitab4.5_0006280g0060 Nicotiana tabacum HOM05D006598 ORTHO05D008132 6.4e-123 444.9 313 68.4
THA.LOC104806941 Tarenaya hassleriana HOM05D006598 ORTHO05D008132 8.4e-123 444.5 319 67.1
Lsat_1_v5_gn_4_119301 Lactuca sativa HOM05D006598 ORTHO05D008132 1.2e-121 440.7 311 68.8
Aa31LG9G12810 Aethionema arabicum HOM05D006598 ORTHO05D008132 3.5e-121 439.1 327 64.8
Carub.0008s0618 Capsella rubella HOM05D006598 ORTHO05D008132 1.7e-120 436.8 325 64.9
HPP92_018806 Vanilla planifolia HOM05D006598 ORTHO05D008132 2.3e-120 436.4 330 64.2
AT5G42760 Arabidopsis thaliana HOM05D006598 ORTHO05D008132 4.3e-119 432.2 324 65.4
Lalb_Chr11g0062331 Lupinus albus HOM05D006598 ORTHO05D008132 7.4e-119 431.4 318 67.0
Thecc.08G027000 Theobroma cacao HOM05D006598 ORTHO05D008132 3.8e-115 419.1 319 66.8
SGA_v2.0_scaffold54G19518 Striga asiatica HOM05D006598 ORTHO05D008132 1.1e-114 417.5 321 62.9
CDE04G2166 Ceratophyllum demersum HOM05D006598 ORTHO05D008132 1.4e-114 417.2 323 61.6
ATR0810G155 Amborella trichopoda HOM05D006598 ORTHO05D008132 7.4e-111 404.8 316 61.4
Oeu049953.1 Olea europaea HOM05D006598 ORTHO05D008132 4.5e-108 395.6 321 61.4
Nitab4.5_0005730g0030 Nicotiana tabacum HOM05D006598 ORTHO05D008132 2.7e-105 386.3 318 60.4
SEGI_39292 Sequoiadendron giganteum HOM05D006598 ORTHO05D008132 1.2e-97 360.9 318 58.5
Zm00001eb059150 Zea mays HOM05D006598 ORTHO05D008132 5.1e-96 355.5 309 56.0
Os03g0775000 Oryza sativa ssp. japonica HOM05D006598 ORTHO05D008132 2.5e-95 353.2 306 56.9
CDE06G0448 Ceratophyllum demersum HOM05D006598 ORTHO05D008132 5.3e-93 345.5 282 59.9
TAR381G1379 Trochodendron aralioides HOM05D006598 ORTHO05D008132 1.3e-86 324.3 206 74.3
Pp3c8_2950 Physcomitrium patens HOM05D006598 ORTHO05D008132 7.9e-81 305.1 306 51.0
AagrBONN_evm.TU.Sc2ySwM_228.3129 Anthoceros agrestis HOM05D006598 ORTHO05D008132 3.9e-80 302.8 324 47.2
Pp3c4_6590 Physcomitrium patens HOM05D006598 ORTHO05D008132 8.8e-80 301.6 305 50.8
HPP92_018704 Vanilla planifolia HOM05D006598 ORTHO05D008132 2.2e-78 297.0 253 58.9
Nitab4.5_0001091g0120 Nicotiana tabacum HOM05D006598 ORTHO05D008132 2.7e-73 280.0 203 66.0
Nn5g29606 Nelumbo nucifera HOM05D006598 ORTHO05D008132 4.7e-73 279.3 201 69.2
CSS0023478 Camellia sinensis var. sinensis HOM05D006598 ORTHO05D008132 1.6e-68 264.2 160 78.8
AUR62039547 Chenopodium quinoa HOM05D006598 ORTHO05D008132 1.0e-64 251.5 242 56.6
HPP92_018786 Vanilla planifolia HOM05D006598 ORTHO05D008132 8.8e-64 248.4 163 71.2
HanXRQChr16g0508491 Helianthus annuus HOM05D006598 ORTHO05D008132 1.7e-62 244.2 190 62.6
unitig_46.g17936 Utricularia gibba HOM05D006598 ORTHO05D008132 3.7e-62 243.0 177 63.3
FAN20G3016 Fragaria x ananassa HOM05D006598 ORTHO05D008132 1.9e-58 230.7 134 79.1
Actinidia29823 Actinidia chinensis HOM05D006598 ORTHO05D008132 1.8e-53 214.2 156 67.9
Pp3c12_23400 Physcomitrium patens HOM05D006598 ORTHO05D008132 2.1e-49 200.7 284 42.3
TAR381G0844 Trochodendron aralioides HOM05D006598 ORTHO05D008132 1.7e-43 181.0 123 71.5
HPP92_018785 Vanilla planifolia HOM05D006598 ORTHO05D008132 8.6e-43 178.7 148 58.1
Actinidia22543 Actinidia chinensis HOM05D006598 ORTHO05D008132 3.6e-41 173.3 119 69.7
MD15G1027400 Malus domestica HOM05D006598 ORTHO05D008132 4.1e-37 159.8 89 79.8
CSS0032599 Camellia sinensis var. sinensis HOM05D006598 ORTHO05D008132 8.1e-25 119.0 111 54.1
Actinidia29824 Actinidia chinensis HOM05D006598 ORTHO05D008132 5.2e-24 116.3 94 58.5
MCO09G151 Micromonas commoda HOM05D006598 ORTHO05D008132 2.1e-17 94.4 258 31.4
Nitab4.5_0000457g0120 Nicotiana tabacum HOM05D006598 ORTHO05D008132 8.1e-17 92.4 72 61.1
HanXRQChr09g0268921 Helianthus annuus HOM05D006598 ORTHO05D008132 1.4e-13 81.6 69 59.4
CBR_g22328 Chara braunii HOM05D006598 ORTHO05D008132 3.0e-11 73.9 122 34.4
Cre17.g737650 Chlamydomonas reinhardtii HOM05D038115 ORTHO05D008132 1.6e-09 68.2 189 29.1
Cre01.g055469 Chlamydomonas reinhardtii HOM05D006737 ORTHO05D008418 8.4e-06 55.8 153 24.8


User provided reference genes

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