Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sc02g0005750 Simmondsia chinensis HOM05D057165 ORTHO05D000008 2.8e-151 538.5 260 100.0
Sc02g0006580 Simmondsia chinensis HOM05D057165 ORTHO05D388300 2.0e-80 303.1 206 76.2
Sc02g0005860 Simmondsia chinensis HOM05D000009 ORTHO05D010531 5.5e-38 162.2 123 69.1
EL10Ac1g00623 Beta vulgaris HOM05D000009 ORTHO05D010531 7.0e-17 92.0 73 64.4
CiPaw.01G245700 Carya illinoinensis HOM05D000009 ORTHO05D010531 9.2e-17 91.7 226 33.6
QL04p053556 Quercus lobata HOM05D000009 ORTHO05D010531 2.0e-16 90.5 132 43.2
EL10Ac1g00625 Beta vulgaris HOM05D000009 ORTHO05D010531 1.7e-15 87.4 83 57.8
QL04p053466 Quercus lobata HOM05D000009 ORTHO05D010531 8.6e-15 85.1 96 49.0
CSS0043327 Camellia sinensis var. sinensis HOM05D000009 ORTHO05D000008 1.5e-14 84.3 74 55.4
PGR042G1823 Punica granatum HOM05D000009 ORTHO05D010531 1.5e-14 84.3 98 48.0
CSS0044768 Camellia sinensis var. sinensis HOM05D000009 ORTHO05D010531 3.3e-14 83.2 69 59.4
Actinidia31728 Actinidia chinensis HOM05D000009 ORTHO05D010531 2.1e-13 80.5 74 55.4
Gohir.D12G180300 Gossypium hirsutum HOM05D000009 ORTHO05D010531 2.1e-13 80.5 80 51.2
Cfa009866 Carpinus fangiana HOM05D000009 ORTHO05D000146 4.7e-13 79.3 127 37.8
GSVIVG01019351001 Vitis vinifera HOM05D000009 ORTHO05D010531 6.2e-13 79.0 81 51.9
Gorai.008G193500 Gossypium raimondii HOM05D000009 ORTHO05D010531 8.0e-13 78.6 80 51.2
Ah.02g123550 Amaranthus hybridus HOM05D000009 ORTHO05D000008 1.1e-12 78.2 83 51.8
Hma1.2p1_1208F.1_g267060 Hydrangea macrophylla HOM05D000009 ORTHO05D010531 1.4e-12 77.8 76 52.6
CSS0027751 Camellia sinensis var. sinensis HOM05D000009 ORTHO05D010531 3.1e-12 76.6 71 50.7
AUR62014487 Chenopodium quinoa HOM05D000009 ORTHO05D010531 4.0e-12 76.3 69 59.4
Gohir.A12G177900 Gossypium hirsutum HOM05D000009 ORTHO05D010531 6.8e-12 75.5 78 51.3
Duzib106G0251 Durio zibethinus HOM05D000009 ORTHO05D010531 1.2e-11 74.7 87 49.4
QL04p053587 Quercus lobata HOM05D000009 ORTHO05D010531 1.2e-11 74.7 141 36.9
MD11G1079400 Malus domestica HOM05D000009 ORTHO05D010531 1.3e-10 71.2 125 39.2
Hma1.2p1_1324F.1_g275650 Hydrangea macrophylla HOM05D000009 ORTHO05D010531 2.2e-10 70.5 75 48.0
Thecc.05G235600 Theobroma cacao HOM05D000009 ORTHO05D010531 2.2e-10 70.5 74 50.0
GSVIVG01001469001 Vitis vinifera HOM05D000009 ORTHO05D000008 2.9e-10 70.1 161 36.0
GSVIVG01006083001 Vitis vinifera HOM05D000009 ORTHO05D000008 2.9e-10 70.1 161 36.0
Cc02_g26510 Coffea canephora HOM05D000009 ORTHO05D010531 3.7e-10 69.7 71 47.9
AUR62034513 Chenopodium quinoa HOM05D000009 ORTHO05D010531 4.9e-10 69.3 72 52.8
GSVIVG01019349001 Vitis vinifera HOM05D000009 ORTHO05D010531 4.9e-10 69.3 74 52.7
QL03p009459 Quercus lobata HOM05D000009 ORTHO05D010531 1.1e-09 68.2 92 43.5
QL04p053505 Quercus lobata HOM05D000009 ORTHO05D010531 1.9e-09 67.4 90 44.4
QL93p1841_0026 Quercus lobata HOM05D000009 ORTHO05D010531 1.9e-09 67.4 90 44.4
Duzib177G0109 Durio zibethinus HOM05D000009 ORTHO05D010531 2.4e-09 67.0 69 52.2
Cfa014939 Carpinus fangiana HOM05D000009 ORTHO05D000146 4.1e-09 66.2 84 46.4
RcHm_v2.0_Chr2g0136341 Rosa chinensis HOM05D000009 ORTHO05D010531 5.4e-09 65.9 99 42.4
AUR62034511 Chenopodium quinoa HOM05D000009 ORTHO05D010531 7.0e-09 65.5 84 47.6
FvH4_6g30120 Fragaria vesca HOM05D000009 ORTHO05D010531 7.0e-09 65.5 95 42.1
FAN14G0035 Fragaria x ananassa HOM05D000009 ORTHO05D010531 7.0e-09 65.5 95 41.1
PGSC0003DMG400019669 Solanum tuberosum HOM05D000009 ORTHO05D000008 7.0e-09 65.5 225 32.4
Lj5C512T4 Lonicera japonica HOM05D000009 ORTHO05D000008 9.2e-09 65.1 267 27.0
Sc02g0006590 Simmondsia chinensis HOM05D000009 ORTHO05D389756 1.2e-08 64.7 29 96.6
Duzib177G0204 Durio zibethinus HOM05D000009 ORTHO05D010531 1.6e-08 64.3 83 44.6
Hma1.2p1_1069F.1_g254060 Hydrangea macrophylla HOM05D000009 ORTHO05D010531 2.1e-08 63.9 70 51.4
CiPaw.01G245800 Carya illinoinensis HOM05D000009 ORTHO05D010531 4.6e-08 62.8 74 48.6
MD17G1184400 Malus domestica HOM05D000009 ORTHO05D010531 4.6e-08 62.8 164 35.4
Ciclev10030540m.g Citrus clementina HOM05D000009 ORTHO05D010531 1.3e-07 61.2 78 47.4
CiPaw.13G150000 Carya illinoinensis HOM05D000009 ORTHO05D010531 1.7e-07 60.8 111 34.2
Manes.10G074374 Manihot esculenta HOM05D000009 ORTHO05D000008 1.7e-07 60.8 149 32.9
COL.COLO4_32222 Corchorus olitorius HOM05D000009 ORTHO05D010531 2.3e-07 60.5 67 47.8
Nn5g27698 Nelumbo nucifera HOM05D000009 ORTHO05D000008 3.9e-07 59.7 79 46.8
Cfa009871 Carpinus fangiana HOM05D000248 ORTHO05D000146 6.6e-07 58.9 66 45.5
Atru.chr2.1624 Acer truncatum HOM05D000009 ORTHO05D010531 1.1e-06 58.2 93 38.7
COL.COLO4_21822 Corchorus olitorius HOM05D000009 ORTHO05D010531 1.5e-06 57.8 69 44.9
Haze_23242 Corylus avellana HOM05D000009 ORTHO05D010531 1.5e-06 57.8 131 30.5
Glyma.03G043650 Glycine max HOM05D000009 ORTHO05D000008 2.5e-06 57.0 207 29.0
Haze_23241 Corylus avellana HOM05D000009 ORTHO05D000008 4.3e-06 56.2 55 52.7
Dinv43517 Davidia involucrata HOM05D000009 ORTHO05D010531 4.3e-06 56.2 73 42.5
FAN05G3042 Fragaria x ananassa HOM05D000009 ORTHO05D010531 4.3e-06 56.2 96 39.6
Rhsim03G0042400 Rhododendron simsii HOM05D000009 ORTHO05D000008 4.3e-06 56.2 297 26.6
Peaxi162Scf00857g00010 Petunia axillaris HOM05D000009 ORTHO05D000008 5.6e-06 55.8 219 29.7
Carub.0003s1419 Capsella rubella HOM05D000009 ORTHO05D000008 7.3e-06 55.5 197 26.9
Cpa.g.sc77.89 Carica papaya HOM05D000009 ORTHO05D000008 7.3e-06 55.5 115 33.9
RcHm_v2.0_Chr3g0492601 Rosa chinensis HOM05D000009 ORTHO05D000008 7.3e-06 55.5 105 38.1
TWI53G1646 Tripterygium wilfordii HOM05D000009 ORTHO05D000008 7.3e-06 55.5 92 38.0
Lj5C466G1 Lonicera japonica HOM05D000009 ORTHO05D000008 9.5e-06 55.1 204 30.4
Medtr5g071780 Medicago truncatula HOM05D000009 ORTHO05D000008 9.5e-06 55.1 139 33.8


User provided reference genes

Program Settings