Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sc02g0005550 Simmondsia chinensis HOM05D003888 ORTHO05D011649 2.3e-293 1011.5 529 100.0
EL10Ac4g09128 Beta vulgaris HOM05D000107 ORTHO05D000062 3.9e-22 110.5 166 38.0
EL10Ac6g14230 Beta vulgaris HOM05D000107 ORTHO05D000062 5.1e-22 110.2 169 37.3
EL10Ac7g17511 Beta vulgaris HOM05D000107 ORTHO05D000062 6.6e-22 109.8 94 52.1
EL10Ac4g08946 Beta vulgaris HOM05D000107 ORTHO05D007163 8.7e-22 109.4 147 40.8
EL10Ac9g20800 Beta vulgaris HOM05D003888 ORTHO05D007163 1.5e-21 108.6 89 56.2
EL10Ac2g02915 Beta vulgaris HOM05D000107 ORTHO05D000062 1.9e-21 108.2 202 37.6
EL10Ac7g16364 Beta vulgaris HOM05D000107 ORTHO05D000062 2.5e-21 107.8 168 36.9
EL10Ac4g09268 Beta vulgaris HOM05D000107 ORTHO05D000062 9.6e-21 105.9 147 39.5
EL10Ac9g20933 Beta vulgaris HOM05D000107 ORTHO05D007163 9.6e-21 105.9 151 39.7
EL10Ac2g03313 Beta vulgaris HOM05D000107 ORTHO05D000062 1.3e-20 105.5 137 43.1
EL10Ac4g09043 Beta vulgaris HOM05D003888 ORTHO05D007163 1.6e-20 105.1 89 53.9
EL10Ac1g01767 Beta vulgaris HOM05D003888 ORTHO05D007163 4.8e-20 103.6 219 32.9
EL10Ac5g11837 Beta vulgaris HOM05D000107 ORTHO05D000062 6.2e-20 103.2 92 52.2
EL10Ac3g06448 Beta vulgaris HOM05D003888 ORTHO05D007163 8.1e-20 102.8 99 46.5
EL10Ac5g11043 Beta vulgaris HOM05D000107 ORTHO05D007163 1.1e-19 102.4 155 37.4
EL10Ac9g20905 Beta vulgaris HOM05D003888 ORTHO05D007163 2.4e-19 101.3 271 28.8
EL10Ac6g13838 Beta vulgaris HOM05D003888 ORTHO05D007163 3.1e-19 100.9 89 51.7
EL10Ac1g02033 Beta vulgaris HOM05D003888 ORTHO05D007163 2.6e-18 97.8 157 35.7
EL10Ac2g03235 Beta vulgaris HOM05D000107 ORTHO05D000062 2.6e-18 97.8 91 51.6
EL10Ac3g06642 Beta vulgaris HOM05D000107 ORTHO05D000062 1.7e-17 95.1 81 51.9
EL10Ac8g19343 Beta vulgaris HOM05D000107 ORTHO05D007163 2.9e-17 94.4 255 29.0
EL10Ac2g03866 Beta vulgaris HOM05D000107 ORTHO05D007163 2.4e-16 91.3 82 52.4
EL10Ac1g02206 Beta vulgaris HOM05D000107 ORTHO05D000062 3.2e-16 90.9 81 50.6
Hund10867 Selenicereus undatus HOM05D009146 ORTHO05D011649 7.1e-16 89.7 88 44.3
Hund03533 Selenicereus undatus HOM05D009146 ORTHO05D011649 9.3e-16 89.4 218 31.7
AUR62025805 Chenopodium quinoa HOM05D003888 ORTHO05D007163 1.2e-15 89.0 154 34.4
AUR62022285 Chenopodium quinoa HOM05D003888 ORTHO05D007163 2.7e-15 87.8 178 32.6
EL10Ac9g20782 Beta vulgaris HOM05D010317 ORTHO05D007163 1.7e-14 85.1 118 39.0
Solyc11g032040.3 Solanum lycopersicum HOM05D000107 ORTHO05D000062 8.7e-14 82.8 89 48.3
Hund12964 Selenicereus undatus HOM05D009146 ORTHO05D011649 2.5e-13 81.3 113 37.2
Hund15065 Selenicereus undatus HOM05D009146 ORTHO05D011649 2.5e-13 81.3 113 36.3
AUR62024779 Chenopodium quinoa HOM05D003888 ORTHO05D007163 3.3e-13 80.9 131 35.9
Solyc04g005730.3 Solanum lycopersicum HOM05D003888 ORTHO05D007163 5.6e-13 80.1 92 41.3
EL10Ac9g22721 Beta vulgaris HOM05D000107 ORTHO05D000062 1.4e-11 75.5 72 47.2
PGSC0003DMG400046763 Solanum tuberosum HOM05D003888 ORTHO05D007163 1.4e-11 75.5 74 43.2
EL10Ac2g03389 Beta vulgaris HOM05D000107 ORTHO05D000062 1.8e-11 75.1 55 52.7
Sc07g0005550 Simmondsia chinensis HOM05D010546 ORTHO05D013352 4.0e-11 73.9 124 35.5
PGSC0003DMG400035776 Solanum tuberosum HOM05D003888 ORTHO05D007163 9.0e-11 72.8 121 37.2
CAN.G1224.2 Capsicum annuum HOM05D003888 ORTHO05D007163 3.4e-10 70.9 86 36.0
Sopen11g014670 Solanum pennellii HOM05D003888 ORTHO05D007163 3.4e-10 70.9 108 36.1
PGSC0003DMG400010920 Solanum tuberosum HOM05D003888 ORTHO05D007163 3.4e-10 70.9 90 40.0
PGSC0003DMG400039182 Solanum tuberosum HOM05D003888 ORTHO05D007163 3.4e-10 70.9 106 34.9
Nitab4.5_0012868g0030 Nicotiana tabacum HOM05D003888 ORTHO05D007163 4.5e-10 70.5 74 41.9
PGSC0003DMG400015985 Solanum tuberosum HOM05D003888 ORTHO05D007163 4.5e-10 70.5 125 36.0
PGSC0003DMG400038965 Solanum tuberosum HOM05D003888 ORTHO05D007163 5.8e-10 70.1 97 38.1
PGSC0003DMG400003494 Solanum tuberosum HOM05D003888 ORTHO05D007163 9.9e-10 69.3 73 46.6
PGSC0003DMG400037028 Solanum tuberosum HOM05D003888 ORTHO05D007163 9.9e-10 69.3 99 37.4
PGSC0003DMG400036468 Solanum tuberosum HOM05D003888 ORTHO05D007163 1.3e-09 68.9 120 35.8
AUR62029973 Chenopodium quinoa HOM05D003888 ORTHO05D007163 1.7e-09 68.6 50 56.0
Solyc10g017750.2 Solanum lycopersicum HOM05D003888 ORTHO05D007163 2.9e-09 67.8 84 36.9
Solyc10g049330.3 Solanum lycopersicum HOM05D003888 ORTHO05D007163 4.9e-09 67.0 126 34.1
EL10Ac8g19540 Beta vulgaris HOM05D000107 ORTHO05D000062 1.2e-07 62.4 168 27.4
Sc03g0005860 Simmondsia chinensis HOM05D010546 ORTHO05D013352 2.7e-07 61.2 104 35.6
Solyc07g039250.1 Solanum lycopersicum HOM05D003888 ORTHO05D007163 6.0e-07 60.1 65 40.0
AUR62041429 Chenopodium quinoa HOM05D000107 ORTHO05D000062 7.9e-07 59.7 196 26.5
Sc09g0006190 Simmondsia chinensis HOM05D009146 ORTHO05D027014 1.3e-06 58.9 33 81.8
Nitab4.5_0022706g0010 Nicotiana tabacum HOM05D009290 ORTHO05D009597 6.7e-06 56.6 110 34.5


User provided reference genes

Program Settings