Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sc02g0005010 Simmondsia chinensis HOM05D006879 ORTHO05D008452 1.0e-60 236.5 115 100.0
QL09p034330 Quercus lobata HOM05D006879 ORTHO05D008452 7.3e-43 177.2 108 75.9
QL09p034374 Quercus lobata HOM05D006879 ORTHO05D008452 7.3e-43 177.2 108 75.9
Cfa016025 Carpinus fangiana HOM05D006879 ORTHO05D008452 1.6e-42 176.0 109 75.2
Haze_00431 Corylus avellana HOM05D000586 ORTHO05D008452 4.8e-42 174.5 101 80.2
Dinv07211 Davidia involucrata HOM05D006879 ORTHO05D008452 1.4e-41 172.9 103 77.7
Hund17297 Selenicereus undatus HOM05D006879 ORTHO05D008452 2.4e-41 172.2 104 76.9
Thecc.08G126700 Theobroma cacao HOM05D006879 ORTHO05D008452 2.4e-41 172.2 107 72.9
FAN20G0093 Fragaria x ananassa HOM05D006879 ORTHO05D008452 3.1e-41 171.8 112 72.3
CiPaw.06G031600 Carya illinoinensis HOM05D006879 ORTHO05D008452 4.0e-41 171.4 107 72.9
Dinv27305 Davidia involucrata HOM05D006879 ORTHO05D008452 5.3e-41 171.0 112 73.2
CSS0011792 Camellia sinensis var. sinensis HOM05D006879 ORTHO05D008452 1.2e-40 169.9 104 75.0
Nn5g28321 Nelumbo nucifera HOM05D006879 ORTHO05D008452 1.2e-40 169.9 100 77.0
PGR083G2398 Punica granatum HOM05D006879 ORTHO05D008452 1.5e-40 169.5 111 71.2
CsaV3_4G028290 Cucumis sativus L. HOM05D006879 ORTHO05D008452 2.0e-40 169.1 113 67.3
Eucgr.F03793 Eucalyptus grandis HOM05D006879 ORTHO05D008452 2.0e-40 169.1 111 71.2
Prupe.1G494800 Prunus persica HOM05D006879 ORTHO05D008452 2.6e-40 168.7 95 80.0
COL.COLO4_03398 Corchorus olitorius HOM05D006879 ORTHO05D008452 3.4e-40 168.3 102 76.5
Manes.02G164300 Manihot esculenta HOM05D006879 ORTHO05D008452 3.4e-40 168.3 111 68.5
FvH4_2g27080 Fragaria vesca HOM05D006879 ORTHO05D008452 4.5e-40 167.9 112 69.6
MELO3C010476.2 Cucumis melo HOM05D006879 ORTHO05D008452 9.9e-40 166.8 113 67.3
FAN24G0949 Fragaria x ananassa HOM05D006879 ORTHO05D008452 1.7e-39 166.0 112 68.8
Gohir.D01G180300 Gossypium hirsutum HOM05D006879 ORTHO05D008452 1.7e-39 166.0 104 72.1
Hma1.2p1_0054F.1_g031040 Hydrangea macrophylla HOM05D006879 ORTHO05D008452 1.7e-39 166.0 108 71.3
Ciclev10002899m.g Citrus clementina HOM05D006879 ORTHO05D008452 2.2e-39 165.6 112 67.0
Gohir.A01G189200 Gossypium hirsutum HOM05D006879 ORTHO05D008452 2.9e-39 165.2 108 69.4
arahy.Tifrunner.gnm1.ann1.0SZ2NS Arachis hypogaea HOM05D006879 ORTHO05D008452 3.8e-39 164.9 106 71.7
arahy.Tifrunner.gnm1.ann1.61DA9N Arachis hypogaea HOM05D006879 ORTHO05D008452 3.8e-39 164.9 106 71.7
arahy.Tifrunner.gnm1.ann1.GV74HV Arachis hypogaea HOM05D006879 ORTHO05D008452 3.8e-39 164.9 106 71.7
RcHm_v2.0_Chr6g0295961 Rosa chinensis HOM05D006879 ORTHO05D008452 3.8e-39 164.9 102 72.5
AUR62014329 Chenopodium quinoa HOM05D006879 ORTHO05D008452 1.4e-38 162.9 116 67.2
Phvul.008G160300 Phaseolus vulgaris HOM05D006879 ORTHO05D008452 1.4e-38 162.9 110 69.1
Duzib041G0788 Durio zibethinus HOM05D006879 ORTHO05D008452 1.9e-38 162.5 108 67.6
Sed0023358 Sechium edule HOM05D006879 ORTHO05D008452 1.9e-38 162.5 112 67.0
Lj1g0005641 Lotus japonicus HOM05D006879 ORTHO05D008452 3.2e-38 161.8 112 66.1
Atru.chr13.1490 Acer truncatum HOM05D006879 ORTHO05D008452 4.2e-38 161.4 102 71.6
Aqoxy6G00233 Aquilegia oxysepala HOM05D006879 ORTHO05D008452 4.2e-38 161.4 103 71.8
AUR62019072 Chenopodium quinoa HOM05D006879 ORTHO05D008452 4.2e-38 161.4 116 65.5
Gorai.002G222300 Gossypium raimondii HOM05D006879 ORTHO05D008452 7.1e-38 160.6 108 67.6
Glyma.14G151700 Glycine max HOM05D006879 ORTHO05D008452 9.3e-38 160.2 105 68.6
Medtr3g088570 Medicago truncatula HOM05D006879 ORTHO05D008452 2.1e-37 159.1 99 70.7
Potri.005G178501 Populus trichocarpa HOM05D006879 ORTHO05D008452 2.1e-37 159.1 112 67.0
VMungo0647G0471 Vigna mungo HOM05D006879 ORTHO05D008452 2.1e-37 159.1 112 66.1
ClCG11G015720 Citrullus lanatus HOM05D006879 ORTHO05D008452 2.7e-37 158.7 124 61.3
HanXRQChr03g0088981 Helianthus annuus HOM05D006879 ORTHO05D008452 2.7e-37 158.7 108 67.6
EL10Ac1g01022 Beta vulgaris HOM05D006879 ORTHO05D008452 4.6e-37 157.9 114 67.5
TAR628G0734 Trochodendron aralioides HOM05D006879 ORTHO05D008452 1.0e-36 156.8 98 71.4
Lalb_Chr11g0066061 Lupinus albus HOM05D006879 ORTHO05D008452 1.8e-36 156.0 111 64.9
Solyc08g067800.3 Solanum lycopersicum HOM05D006879 ORTHO05D008452 1.8e-36 156.0 100 70.0
Sopen08g021740 Solanum pennellii HOM05D006879 ORTHO05D008452 1.8e-36 156.0 100 70.0
Lsat_1_v5_gn_6_93360 Lactuca sativa HOM05D006879 ORTHO05D008452 2.3e-36 155.6 106 69.8
CDE07G0981 Ceratophyllum demersum HOM05D006879 ORTHO05D008452 5.1e-36 154.5 101 69.3
Nitab4.5_0004334g0040 Nicotiana tabacum HOM05D006879 ORTHO05D008452 5.1e-36 154.5 103 70.9
CAN.G21.5 Capsicum annuum HOM05D006879 ORTHO05D008452 6.7e-36 154.1 102 71.6
MD15G1347100 Malus domestica HOM05D006879 ORTHO05D008452 6.7e-36 154.1 117 65.0
Actinidia03466 Actinidia chinensis HOM05D006879 ORTHO05D008452 1.5e-35 152.9 108 66.7
TWI32G0821 Tripterygium wilfordii HOM05D006879 ORTHO05D008452 2.5e-35 152.1 93 73.1
Aa31LG4G7630 Aethionema arabicum HOM05D006879 ORTHO05D008452 3.3e-35 151.8 100 64.0
PSO528G0112 Papaver somniferum HOM05D006879 ORTHO05D008452 4.3e-35 151.4 104 65.4
BcaB02g07111 Brassica carinata HOM05D006879 ORTHO05D008452 7.4e-35 150.6 112 62.5
Cc10_g12010 Coffea canephora HOM05D006879 ORTHO05D008452 7.4e-35 150.6 100 69.0
Nitab4.5_0005583g0080 Nicotiana tabacum HOM05D006879 ORTHO05D008452 7.4e-35 150.6 108 67.6
AL2G37750 Arabidopsis lyrata HOM05D006879 ORTHO05D008452 9.6e-35 150.2 100 67.0
FAN15G3590 Fragaria x ananassa HOM05D006879 ORTHO05D008452 9.6e-35 150.2 147 53.7
Ca_28182_v3 Cicer arietinum L. HOM05D006879 ORTHO05D008452 1.3e-34 149.8 87 75.9
AT1G77540 Arabidopsis thaliana HOM05D006879 ORTHO05D008452 1.6e-34 149.4 100 66.0
BraA07t30441Z Brassica rapa HOM05D006879 ORTHO05D008452 2.1e-34 149.1 112 61.6
CANSAT56G2034 Cannabis sativa HOM05D006879 ORTHO05D008452 2.1e-34 149.1 118 62.7
Thhalv10019334m.g Eutrema salsugineum HOM05D006879 ORTHO05D008452 2.8e-34 148.7 95 69.5
THA.LOC104813659 Tarenaya hassleriana HOM05D006879 ORTHO05D008452 2.8e-34 148.7 109 62.4
ATR0584G146 Amborella trichopoda HOM05D006879 ORTHO05D008452 3.7e-34 148.3 94 71.3
Psat5g086200 Pisum sativum HOM05D006879 ORTHO05D008452 3.7e-34 148.3 103 65.0
CARHR071070 Cardamine hirsuta HOM05D006879 ORTHO05D008452 4.8e-34 147.9 101 66.3
Sp5g32720 Schrenkiella parvula HOM05D006879 ORTHO05D008452 4.8e-34 147.9 101 63.4
A07p27940 Brassica napus HOM05D006879 ORTHO05D008452 6.2e-34 147.5 112 60.7
C06p31190 Brassica napus HOM05D006879 ORTHO05D008452 6.2e-34 147.5 112 61.6
PSO170G0506 Papaver somniferum HOM05D006879 ORTHO05D008452 6.2e-34 147.5 104 66.3
AL1G34970 Arabidopsis lyrata HOM05D006879 ORTHO05D008452 8.1e-34 147.1 100 65.0
BcaC08g45472 Brassica carinata HOM05D006879 ORTHO05D008452 8.1e-34 147.1 112 60.7
BolC6t38260H Brassica oleracea HOM05D006879 ORTHO05D008452 8.1e-34 147.1 112 60.7
ECA240G3722 Erigeron canadensis HOM05D006879 ORTHO05D008452 8.1e-34 147.1 112 65.2
Carub.0002s2444 Capsella rubella HOM05D006879 ORTHO05D008452 1.1e-33 146.7 100 66.0
Aa31LG7G5750 Aethionema arabicum HOM05D006879 ORTHO05D008452 1.8e-33 146.0 96 67.7
Carub.0001s2123 Capsella rubella HOM05D006879 ORTHO05D008452 2.4e-33 145.6 102 63.7
BcaC05g26099 Brassica carinata HOM05D006879 ORTHO05D008452 6.9e-33 144.1 95 66.3
AT1G21770 Arabidopsis thaliana HOM05D006879 ORTHO05D008452 9.0e-33 143.7 104 61.5
BolC5t30777H Brassica oleracea HOM05D006879 ORTHO05D008452 1.2e-32 143.3 95 66.3
Migut.C01128 Erythranthe guttata HOM05D006879 ORTHO05D008452 1.2e-32 143.3 103 66.0
MSTRG.25382 Avicennia marina HOM05D006879 ORTHO05D008452 1.5e-32 142.9 102 67.6
Thhalv10009164m.g Eutrema salsugineum HOM05D006879 ORTHO05D008452 1.7e-31 139.4 97 63.9
Sp1g19330 Schrenkiella parvula HOM05D006879 ORTHO05D008452 2.2e-31 139.0 97 62.9
SGA_v2.0_scaffold52G18964 Striga asiatica HOM05D006879 ORTHO05D008452 2.2e-31 139.0 106 64.2
BcaB07g32176 Brassica carinata HOM05D006879 ORTHO05D008452 4.9e-31 137.9 95 63.2
A06p17880 Brassica napus HOM05D006879 ORTHO05D008452 1.4e-30 136.3 95 63.2
BraA06t24878Z Brassica rapa HOM05D006879 ORTHO05D008452 1.4e-30 136.3 95 63.2
C05p20780 Brassica napus HOM05D006879 ORTHO05D008452 2.5e-30 135.6 95 64.2
Cpa.g.sc418.6 Carica papaya HOM05D006879 ORTHO05D008452 9.3e-30 133.7 78 78.2
TPR.G20905 Trifolium pratense HOM05D006879 ORTHO05D008452 1.6e-29 132.9 89 71.9
vmacro00838 Vaccinium macrocarpon HOM05D006879 ORTHO05D008452 5.1e-28 127.9 80 75.0
CAN.G21.4 Capsicum annuum HOM05D006879 ORTHO05D008452 1.9e-27 125.9 105 56.2
RhsimUnG0092300 Rhododendron simsii HOM05D000586 ORTHO05D008452 1.9e-27 125.9 81 71.6
Ah.05g171050 Amaranthus hybridus HOM05D006879 ORTHO05D008452 1.2e-24 116.7 91 64.8
GSVIVG01008857001 Vitis vinifera HOM05D006879 ORTHO05D008452 1.5e-24 116.3 67 79.1
Oeu059437.1 Olea europaea HOM05D006879 ORTHO05D008452 2.0e-24 115.9 67 76.1
Peaxi162Scf00332g00015 Petunia axillaris HOM05D006879 ORTHO05D008452 1.6e-21 106.3 79 65.8
HanXRQChr04g0101301 Helianthus annuus HOM05D006879 ORTHO05D008452 2.1e-21 105.9 75 70.7
HanXRQChr01g0005251 Helianthus annuus HOM05D006879 ORTHO05D008452 6.1e-21 104.4 76 68.4
SMO146G0286 Selaginella moellendorffii HOM05D006879 ORTHO05D008452 6.1e-21 104.4 92 52.2
Zm00001eb082730 Zea mays HOM05D006879 ORTHO05D008452 1.8e-20 102.8 108 48.1
Pp3c12_9490 Physcomitrium patens HOM05D006879 ORTHO05D008452 2.3e-20 102.4 99 49.5
SEGI_19819 Sequoiadendron giganteum HOM05D006879 ORTHO05D008452 3.0e-20 102.1 85 58.8
Mapoly0075s0062 Marchantia polymorpha HOM05D006879 ORTHO05D008452 1.5e-19 99.8 113 43.4
AagrBONN_evm.TU.Sc2ySwM_117.2168 Anthoceros agrestis HOM05D006879 ORTHO05D008452 1.4e-17 93.2 97 48.5
Eucgr.H03927 Eucalyptus grandis HOM05D006879 ORTHO05D008452 1.2e-16 90.1 100 51.0
Os04g0431300 Oryza sativa ssp. japonica HOM05D006879 ORTHO05D008452 1.1e-14 83.6 61 57.4
Eucgr.H03925 Eucalyptus grandis HOM05D006879 ORTHO05D008452 3.2e-14 82.0 56 66.1
CBR_g36233 Chara braunii HOM05D006879 ORTHO05D008452 6.7e-12 74.3 149 30.9
HanXRQChr09g0244451 Helianthus annuus HOM05D006879 ORTHO05D008452 6.7e-12 74.3 64 56.2


User provided reference genes

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