Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sc02g0004570 Simmondsia chinensis HOM05D008037 ORTHO05D004271 2.2e-90 335.5 159 100.0
Nitab4.5_0001761g0150 Nicotiana tabacum HOM05D008037 ORTHO05D004271 3.6e-24 115.5 74 75.7
CAN.G134.6 Capsicum annuum HOM05D008037 ORTHO05D004271 2.0e-22 109.8 82 69.5
Sed0000516 Sechium edule HOM05D008037 ORTHO05D004271 2.9e-21 105.9 205 38.0
Sopen10g016570 Solanum pennellii HOM05D008037 ORTHO05D004271 2.3e-18 96.3 136 43.4
Solyc11g021160.1 Solanum lycopersicum HOM05D001966 ORTHO05D010055 6.2e-16 88.2 112 47.3
Nitab4.5_0001170g0070 Nicotiana tabacum HOM05D008037 ORTHO05D004271 3.8e-13 79.0 44 84.1
vmacro22395 Vaccinium macrocarpon HOM05D008016 ORTHO05D004271 3.8e-13 79.0 68 63.2
vmacro22417 Vaccinium macrocarpon HOM05D008354 ORTHO05D010055 3.8e-13 79.0 54 72.2
vmacro22420 Vaccinium macrocarpon HOM05D008016 ORTHO05D010055 3.8e-13 79.0 68 63.2
DCAR_001145 Daucus carota HOM05D001966 ORTHO05D010055 1.1e-12 77.4 43 86.0
Hma1.2p1_0594F.1_g185800 Hydrangea macrophylla HOM05D001966 ORTHO05D010986 1.1e-12 77.4 43 86.0
Peaxi162Scf00687g00611 Petunia axillaris HOM05D001966 ORTHO05D010055 5.4e-12 75.1 43 83.7
Nitab4.5_0005831g0030 Nicotiana tabacum HOM05D001090 ORTHO05D006167 1.2e-11 73.9 66 60.6
FAN26G1474 Fragaria x ananassa HOM05D001966 ORTHO05D010986 1.6e-11 73.6 59 64.4
EL10As10g23964 Beta vulgaris HOM05D001966 ORTHO05D010055 3.5e-11 72.4 45 82.2
Nitab4.5_0006502g0020 Nicotiana tabacum HOM05D001966 ORTHO05D010055 1.7e-10 70.1 44 72.7
Nitab4.5_0003101g0110 Nicotiana tabacum HOM05D008354 ORTHO05D010055 3.0e-10 69.3 54 63.0
ClCG02G009760 Citrullus lanatus HOM05D001966 ORTHO05D000002 6.6e-10 68.2 38 84.2
Solyc09g011150.1 Solanum lycopersicum HOM05D008037 ORTHO05D004271 8.7e-10 67.8 38 81.6
Nitab4.5_0008665g0040 Nicotiana tabacum HOM05D001070 ORTHO05D002096 1.1e-09 67.4 51 64.7
Psat5g119000 Pisum sativum HOM05D009726 ORTHO05D010588 1.1e-09 67.4 106 40.6
Gohir.A07G174766 Gossypium hirsutum HOM05D008016 ORTHO05D004271 1.9e-09 66.6 37 81.1
Nitab4.5_0001727g0120 Nicotiana tabacum HOM05D008016 ORTHO05D010055 1.9e-09 66.6 65 55.4
Lj1g0013448 Lotus japonicus HOM05D007952 ORTHO05D009823 2.5e-09 66.2 48 70.8
Nitab4.5_0004137g0030 Nicotiana tabacum HOM05D008354 ORTHO05D010055 7.3e-09 64.7 66 53.0
Nitab4.5_0012234g0020 Nicotiana tabacum HOM05D008016 ORTHO05D010055 7.3e-09 64.7 64 56.2
Sed0006309 Sechium edule HOM05D010190 ORTHO05D009823 9.6e-09 64.3 123 38.2
HPP92_028386 Vanilla planifolia HOM05D009726 ORTHO05D010055 9.6e-09 64.3 38 81.6
arahy.Tifrunner.gnm1.ann1.XGYT8C Arachis hypogaea HOM05D008037 ORTHO05D004271 1.6e-08 63.5 48 66.7
SHI36397 Sapria himalayana HOM05D008037 ORTHO05D004271 1.6e-08 63.5 69 50.7
Sed0014465 Sechium edule HOM05D010190 ORTHO05D004271 2.1e-08 63.2 118 38.1
arahy.Tifrunner.gnm1.ann1.KSIE27 Arachis hypogaea HOM05D008037 ORTHO05D004271 3.6e-08 62.4 83 38.6
Nitab4.5_0000002g0300 Nicotiana tabacum HOM05D001966 ORTHO05D010055 4.8e-08 62.0 40 72.5
Nitab4.5_0001249g0070 Nicotiana tabacum HOM05D008016 ORTHO05D010588 6.2e-08 61.6 63 54.0
SHI27036 Sapria himalayana HOM05D001966 ORTHO05D010986 6.2e-08 61.6 37 78.4
CAN.G1298.21 Capsicum annuum HOM05D000445 ORTHO05D000314 8.1e-08 61.2 43 69.8
Gohir.A09G103364 Gossypium hirsutum HOM05D008016 ORTHO05D004271 8.1e-08 61.2 33 81.8
Lj4g0016112 Lotus japonicus HOM05D007952 ORTHO05D009823 1.1e-07 60.8 67 53.7
EL10As10g23963 Beta vulgaris HOM05D008037 ORTHO05D004271 1.4e-07 60.5 32 81.2
SabraPtG0006400 Salix brachista HOM05D012647 ORTHO05D014727 1.4e-07 60.5 76 48.7
Nitab4.5_0027992g0040 Nicotiana tabacum HOM05D008037 ORTHO05D004271 1.8e-07 60.1 48 64.6
EL10Ac5g11360 Beta vulgaris HOM05D008037 ORTHO05D004271 2.4e-07 59.7 32 78.1
Hund28446 Selenicereus undatus HOM05D008259 ORTHO05D004271 2.4e-07 59.7 39 69.2
Hund28585 Selenicereus undatus HOM05D008259 ORTHO05D004271 2.4e-07 59.7 39 69.2
Hund28944 Selenicereus undatus HOM05D008259 ORTHO05D004271 2.4e-07 59.7 39 69.2
Hund28949 Selenicereus undatus HOM05D008259 ORTHO05D004271 2.4e-07 59.7 39 69.2
Hund28959 Selenicereus undatus HOM05D008259 ORTHO05D004271 2.4e-07 59.7 39 69.2
Hund29107 Selenicereus undatus HOM05D008259 ORTHO05D004271 2.4e-07 59.7 39 69.2
Hund29184 Selenicereus undatus HOM05D008259 ORTHO05D004271 2.4e-07 59.7 39 69.2
Hund29242 Selenicereus undatus HOM05D008259 ORTHO05D004271 2.4e-07 59.7 39 69.2
Hund29271 Selenicereus undatus HOM05D008259 ORTHO05D004271 2.4e-07 59.7 39 69.2
Hund29275 Selenicereus undatus HOM05D008259 ORTHO05D004271 2.4e-07 59.7 39 69.2
Hund29279 Selenicereus undatus HOM05D008259 ORTHO05D004271 2.4e-07 59.7 39 69.2
Hund29283 Selenicereus undatus HOM05D008259 ORTHO05D004271 2.4e-07 59.7 39 69.2
Hund29451 Selenicereus undatus HOM05D008259 ORTHO05D004271 2.4e-07 59.7 39 69.2
Hund29497 Selenicereus undatus HOM05D008259 ORTHO05D004271 2.4e-07 59.7 39 69.2
Hund29785 Selenicereus undatus HOM05D008259 ORTHO05D004271 2.4e-07 59.7 39 69.2
Hund29912 Selenicereus undatus HOM05D008259 ORTHO05D004271 2.4e-07 59.7 39 69.2
Hund30004 Selenicereus undatus HOM05D008259 ORTHO05D004271 2.4e-07 59.7 39 69.2
Hund30064 Selenicereus undatus HOM05D008259 ORTHO05D004271 2.4e-07 59.7 39 69.2
Hund30203 Selenicereus undatus HOM05D008259 ORTHO05D004271 2.4e-07 59.7 39 69.2
Sc04g0003580 Simmondsia chinensis HOM05D007952 ORTHO05D009823 3.1e-07 59.3 36 75.0
Lsat_1_v5_gn_4_63021 Lactuca sativa HOM05D007952 ORTHO05D009823 5.3e-07 58.5 47 63.8
Peaxi162Scf00080g00519 Petunia axillaris HOM05D001966 ORTHO05D010055 5.3e-07 58.5 41 70.7
Hund25912 Selenicereus undatus HOM05D008037 ORTHO05D004271 6.9e-07 58.2 30 83.3
Hund27633 Selenicereus undatus HOM05D008037 ORTHO05D004271 6.9e-07 58.2 30 83.3
Hund27757 Selenicereus undatus HOM05D008037 ORTHO05D004271 6.9e-07 58.2 30 83.3
Hund27833 Selenicereus undatus HOM05D008037 ORTHO05D004271 6.9e-07 58.2 30 83.3
Hund28332 Selenicereus undatus HOM05D008037 ORTHO05D004271 6.9e-07 58.2 30 83.3
Hund28440 Selenicereus undatus HOM05D008037 ORTHO05D004271 6.9e-07 58.2 30 83.3
Hund28538 Selenicereus undatus HOM05D008037 ORTHO05D004271 6.9e-07 58.2 30 83.3
Hund28614 Selenicereus undatus HOM05D008037 ORTHO05D004271 6.9e-07 58.2 30 83.3
Hund28956 Selenicereus undatus HOM05D008037 ORTHO05D004271 6.9e-07 58.2 30 83.3
Hund28981 Selenicereus undatus HOM05D008037 ORTHO05D004271 6.9e-07 58.2 30 83.3
Hund29028 Selenicereus undatus HOM05D008037 ORTHO05D004271 6.9e-07 58.2 30 83.3
Hund29091 Selenicereus undatus HOM05D008037 ORTHO05D004271 6.9e-07 58.2 30 83.3
Hund29181 Selenicereus undatus HOM05D008037 ORTHO05D004271 6.9e-07 58.2 30 83.3
Hund29249 Selenicereus undatus HOM05D008037 ORTHO05D004271 6.9e-07 58.2 30 83.3
Hund29256 Selenicereus undatus HOM05D008037 ORTHO05D004271 6.9e-07 58.2 30 83.3
Hund29263 Selenicereus undatus HOM05D008037 ORTHO05D004271 6.9e-07 58.2 30 83.3
Hund29290 Selenicereus undatus HOM05D008037 ORTHO05D004271 6.9e-07 58.2 30 83.3
Hund29318 Selenicereus undatus HOM05D008037 ORTHO05D004271 6.9e-07 58.2 30 83.3
Hund29436 Selenicereus undatus HOM05D008037 ORTHO05D004271 6.9e-07 58.2 30 83.3
Hund29853 Selenicereus undatus HOM05D008037 ORTHO05D004271 6.9e-07 58.2 30 83.3
Hund30002 Selenicereus undatus HOM05D008037 ORTHO05D004271 6.9e-07 58.2 30 83.3
Hund30263 Selenicereus undatus HOM05D008037 ORTHO05D004271 6.9e-07 58.2 30 83.3
Hund30448 Selenicereus undatus HOM05D008037 ORTHO05D004271 6.9e-07 58.2 30 83.3
Hund30632 Selenicereus undatus HOM05D008037 ORTHO05D004271 6.9e-07 58.2 30 83.3
Hund30993 Selenicereus undatus HOM05D008037 ORTHO05D004271 6.9e-07 58.2 30 83.3
Sopen02g009090 Solanum pennellii HOM05D008037 ORTHO05D004271 1.2e-06 57.4 48 62.5
BcaB02g11353 Brassica carinata HOM05D007952 ORTHO05D009823 1.5e-06 57.0 31 80.6
CAN.G100.35 Capsicum annuum HOM05D008016 ORTHO05D010588 1.5e-06 57.0 113 35.4
FAN26G0971 Fragaria x ananassa HOM05D008037 ORTHO05D004271 2.6e-06 56.2 30 83.3
RcHm_v2.0_Chr7g0221131 Rosa chinensis HOM05D008016 ORTHO05D004271 2.6e-06 56.2 30 83.3
arahy.Tifrunner.gnm1.ann1.20TFSQ Arachis hypogaea HOM05D008037 ORTHO05D004271 3.4e-06 55.8 30 83.3
arahy.Tifrunner.gnm1.ann1.JURL6Q Arachis hypogaea HOM05D001966 ORTHO05D007227 3.4e-06 55.8 30 83.3
arahy.Tifrunner.gnm1.ann1.KJ09M7 Arachis hypogaea HOM05D008037 ORTHO05D004271 3.4e-06 55.8 30 83.3
arahy.Tifrunner.gnm1.ann1.LBLK2X Arachis hypogaea HOM05D008037 ORTHO05D004271 3.4e-06 55.8 30 83.3
arahy.Tifrunner.gnm1.ann1.P2FSG5 Arachis hypogaea HOM05D008037 ORTHO05D004271 3.4e-06 55.8 30 83.3
FAN22G1916 Fragaria x ananassa HOM05D008037 ORTHO05D004271 3.4e-06 55.8 30 83.3
Lalb_Chr03g0039361 Lupinus albus HOM05D008016 ORTHO05D004271 3.4e-06 55.8 30 83.3
Sed0000469 Sechium edule HOM05D010190 ORTHO05D009823 3.4e-06 55.8 34 82.4
arahy.Tifrunner.gnm1.ann1.WFJR7S Arachis hypogaea HOM05D008037 ORTHO05D004271 4.5e-06 55.5 32 78.1
CAN.G1185.5 Capsicum annuum HOM05D001070 ORTHO05D010055 4.5e-06 55.5 43 67.4
Gohir.A09G101825 Gossypium hirsutum HOM05D008016 ORTHO05D004271 4.5e-06 55.5 34 73.5
Potri.008G221801 Populus trichocarpa HOM05D008037 ORTHO05D004271 4.5e-06 55.5 30 83.3
arahy.Tifrunner.gnm1.ann1.7D98FQ Arachis hypogaea HOM05D000963 ORTHO05D004715 9.9e-06 54.3 38 68.4
arahy.Tifrunner.gnm1.ann1.FN06MZ Arachis hypogaea HOM05D000533 ORTHO05D006151 9.9e-06 54.3 38 68.4
arahy.Tifrunner.gnm1.ann1.U095GY Arachis hypogaea HOM05D000963 ORTHO05D004715 9.9e-06 54.3 38 68.4


User provided reference genes

Program Settings