Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sc02g0003950 Simmondsia chinensis HOM05D006715 ORTHO05D008345 1.1e-144 516.5 249 100.0
Hund26691 Selenicereus undatus HOM05D006715 ORTHO05D008345 1.8e-62 243.4 248 48.4
Dinv41067 Davidia involucrata HOM05D006715 ORTHO05D008345 1.3e-60 237.3 255 49.8
GSVIVG01034549001 Vitis vinifera HOM05D006715 ORTHO05D008345 1.3e-57 227.3 242 49.2
Actinidia17784 Actinidia chinensis HOM05D006715 ORTHO05D008345 1.9e-56 223.4 260 48.1
RcHm_v2.0_Chr6g0275051 Rosa chinensis HOM05D006715 ORTHO05D008345 5.3e-54 215.3 241 48.1
TAR381G1273 Trochodendron aralioides HOM05D006715 ORTHO05D008345 1.5e-53 213.8 239 49.0
Cfa018312 Carpinus fangiana HOM05D006715 ORTHO05D008345 2.0e-53 213.4 238 49.2
RcHm_v2.0_Chr5g0050861 Rosa chinensis HOM05D006715 ORTHO05D008345 5.8e-53 211.8 242 47.1
COL.COLO4_29857 Corchorus olitorius HOM05D006715 ORTHO05D008345 3.8e-52 209.1 242 48.3
Manes.02G180601 Manihot esculenta HOM05D006715 ORTHO05D008345 6.4e-52 208.4 239 48.5
Duzib093G1010 Durio zibethinus HOM05D006715 ORTHO05D008345 2.4e-51 206.5 238 48.3
Thecc.08G154500 Theobroma cacao HOM05D006715 ORTHO05D008345 3.2e-51 206.1 239 49.8
CiPaw.16G011000 Carya illinoinensis HOM05D006715 ORTHO05D008345 5.5e-51 205.3 238 45.8
FAN27G2814 Fragaria x ananassa HOM05D006715 ORTHO05D008345 7.1e-51 204.9 245 46.1
Ciclev10000601m.g Citrus clementina HOM05D006715 ORTHO05D008345 1.2e-50 204.1 236 48.7
Potri.005G193500 Populus trichocarpa HOM05D006715 ORTHO05D008345 1.2e-50 204.1 236 47.0
vmacro20039 Vaccinium macrocarpon HOM05D006715 ORTHO05D008345 1.2e-50 204.1 247 46.6
FvH4_2g13430 Fragaria vesca HOM05D006715 ORTHO05D008345 3.5e-50 202.6 249 45.8
FAN24G1213 Fragaria x ananassa HOM05D006715 ORTHO05D008345 6.0e-50 201.8 249 45.8
Aqoxy5G00857 Aquilegia oxysepala HOM05D006715 ORTHO05D008345 7.9e-50 201.4 225 48.4
Lj7A376T34 Lonicera japonica HOM05D006715 ORTHO05D008345 1.8e-49 200.3 250 44.4
CANSAT25G3857 Cannabis sativa HOM05D006715 ORTHO05D008345 3.0e-49 199.5 260 41.9
Rhsim05G0181200 Rhododendron simsii HOM05D006715 ORTHO05D008345 5.1e-49 198.7 248 45.6
Atru.chr13.2084 Acer truncatum HOM05D006715 ORTHO05D008345 8.7e-49 198.0 222 48.2
Eucgr.F02698 Eucalyptus grandis HOM05D006715 ORTHO05D008345 1.5e-48 197.2 228 49.1
CsaV3_6G002600 Cucumis sativus L. HOM05D006715 ORTHO05D008345 2.5e-48 196.4 234 43.2
Lj2g0009741 Lotus japonicus HOM05D006715 ORTHO05D008345 1.3e-47 194.1 232 47.0
ClCG08G002210 Citrullus lanatus HOM05D006715 ORTHO05D008345 1.6e-47 193.7 236 43.2
Gohir.A06G112504 Gossypium hirsutum HOM05D006715 ORTHO05D008345 1.6e-47 193.7 237 46.8
DCAR_010095 Daucus carota HOM05D006715 ORTHO05D008345 2.1e-47 193.4 207 46.9
Nn5g28769 Nelumbo nucifera HOM05D006715 ORTHO05D008345 2.8e-47 193.0 256 44.1
Gohir.D06G116900 Gossypium hirsutum HOM05D006715 ORTHO05D008345 3.7e-47 192.6 235 46.4
Gorai.010G134600 Gossypium raimondii HOM05D006715 ORTHO05D008345 3.7e-47 192.6 235 46.4
TPR.G23114 Trifolium pratense HOM05D006715 ORTHO05D008345 3.7e-47 192.6 234 44.9
QL09p013340 Quercus lobata HOM05D006715 ORTHO05D008345 8.2e-47 191.4 203 47.3
Psat1g102000 Pisum sativum HOM05D006715 ORTHO05D008345 1.4e-46 190.7 251 43.8
MELO3C025024.2 Cucumis melo HOM05D006715 ORTHO05D008345 2.4e-46 189.9 218 45.9
Cpa.g.sc1027.1 Carica papaya HOM05D006715 ORTHO05D008345 4.0e-46 189.1 253 39.1
PGR042G1662 Punica granatum HOM05D006715 ORTHO05D008345 1.2e-45 187.6 248 41.9
Medtr2g045070 Medicago truncatula HOM05D006715 ORTHO05D008345 1.5e-45 187.2 237 44.7
TWI34G0194 Tripterygium wilfordii HOM05D006715 ORTHO05D008345 3.4e-45 186.0 288 38.2
MSTRG.24217 Avicennia marina HOM05D006715 ORTHO05D008345 4.5e-45 185.7 233 44.2
CAN.G1215.10 Capsicum annuum HOM05D006715 ORTHO05D008345 5.8e-45 185.3 251 40.6
MD05G1027900 Malus domestica HOM05D006715 ORTHO05D008345 7.6e-45 184.9 212 46.7
Sopen04g027550 Solanum pennellii HOM05D006715 ORTHO05D008345 1.7e-44 183.7 251 38.6
arahy.Tifrunner.gnm1.ann1.6MC3QX Arachis hypogaea HOM05D006715 ORTHO05D008345 4.9e-44 182.2 268 40.3
Phvul.004G094200 Phaseolus vulgaris HOM05D006715 ORTHO05D008345 6.5e-44 181.8 214 48.1
Migut.N03207 Erythranthe guttata HOM05D006715 ORTHO05D008345 1.1e-43 181.0 206 46.1
BraA09t35760Z Brassica rapa HOM05D006715 ORTHO05D008345 1.9e-43 180.3 218 43.1
VMungo0464G1764 Vigna mungo HOM05D006715 ORTHO05D008345 3.2e-43 179.5 219 45.7
Peaxi162Scf00599g00121 Petunia axillaris HOM05D006715 ORTHO05D008345 4.2e-43 179.1 268 38.8
THA.LOC104804670 Tarenaya hassleriana HOM05D006715 ORTHO05D008345 1.2e-42 177.6 237 40.9
A09p00880 Brassica napus HOM05D006715 ORTHO05D008345 1.6e-42 177.2 218 42.7
BolC9t53031H Brassica oleracea HOM05D006715 ORTHO05D008345 1.6e-42 177.2 217 43.3
unitig_21.g20147 Utricularia gibba HOM05D006715 ORTHO05D008345 1.6e-42 177.2 240 41.2
Nitab4.5_0001187g0100 Nicotiana tabacum HOM05D006715 ORTHO05D008345 2.1e-42 176.8 245 42.4
Sed0009104 Sechium edule HOM05D006715 ORTHO05D008345 2.1e-42 176.8 226 45.1
Lsat_1_v5_gn_9_41180 Lactuca sativa HOM05D006715 ORTHO05D008345 2.7e-42 176.4 235 41.3
CARHR035370 Cardamine hirsuta HOM05D006715 ORTHO05D008345 6.0e-42 175.3 208 42.3
C09p00980 Brassica napus HOM05D006715 ORTHO05D008345 1.0e-41 174.5 222 43.2
SGA_v2.0_scaffold25G11186 Striga asiatica HOM05D006715 ORTHO05D008345 1.0e-41 174.5 254 41.7
AT1G43245 Arabidopsis thaliana HOM05D006715 ORTHO05D008345 2.3e-41 173.3 236 43.6
BcaC04g24108 Brassica carinata HOM05D006715 ORTHO05D008345 2.3e-41 173.3 217 42.9
ATR0820G173 Amborella trichopoda HOM05D006715 ORTHO05D008345 3.0e-41 172.9 238 42.9
AL1G51600 Arabidopsis lyrata HOM05D006715 ORTHO05D008345 3.9e-41 172.6 243 39.9
arahy.Tifrunner.gnm1.ann1.SG7PGU Arachis hypogaea HOM05D006715 ORTHO05D008345 8.7e-41 171.4 287 37.3
ECA232G1953 Erigeron canadensis HOM05D006715 ORTHO05D008345 1.1e-40 171.0 226 42.5
Sp1g32410 Schrenkiella parvula HOM05D006715 ORTHO05D008345 1.1e-40 171.0 225 42.2
SalBow6G6609 Salvia bowleyana HOM05D006715 ORTHO05D008345 2.5e-40 169.9 208 44.7
PSO675G4790 Papaver somniferum HOM05D006715 ORTHO05D008345 4.3e-40 169.1 234 43.2
AUR62026687 Chenopodium quinoa HOM05D006715 ORTHO05D008345 7.4e-40 168.3 223 42.2
Thhalv10003905m.g Eutrema salsugineum HOM05D006715 ORTHO05D008345 1.6e-39 167.2 231 40.3
Glyma.16G166267 Glycine max HOM05D006715 ORTHO05D008345 1.6e-39 167.2 205 47.8
BcaB01g02294 Brassica carinata HOM05D006715 ORTHO05D008345 2.8e-39 166.4 219 42.5
Lalb_Chr01g0009551 Lupinus albus HOM05D006715 ORTHO05D008345 8.2e-39 164.9 175 52.0
Aa31LG6G9940 Aethionema arabicum HOM05D006715 ORTHO05D008345 5.9e-37 158.7 275 36.7
HanXRQChr11g0320291 Helianthus annuus HOM05D006715 ORTHO05D008345 5.9e-37 158.7 224 42.0
CDE12G0089 Ceratophyllum demersum HOM05D006715 ORTHO05D008345 7.6e-37 158.3 224 40.6
Prupe.8G033600 Prunus persica HOM05D006715 ORTHO05D008345 1.3e-36 157.5 191 44.5
Ca_26954_v3 Cicer arietinum L. HOM05D006715 ORTHO05D008345 3.2e-35 152.9 206 41.7
Haze_17767 Corylus avellana HOM05D006715 ORTHO05D008345 1.2e-34 151.0 140 49.3
Cc10_g14930 Coffea canephora HOM05D006715 ORTHO05D008345 1.1e-32 144.4 176 43.8
Os04g0423600 Oryza sativa ssp. japonica HOM05D006715 ORTHO05D008345 1.9e-32 143.7 231 36.8
Lj2g0026984 Lotus japonicus HOM05D006715 ORTHO05D008345 2.2e-31 140.2 122 54.1
Glyma.16G166500 Glycine max HOM05D006715 ORTHO05D008345 2.8e-31 139.8 216 41.2
EL10Ac1g01568 Beta vulgaris HOM05D006715 ORTHO05D008345 3.7e-31 139.4 206 41.3
MBI17_g41095_MAGBIO Magnolia biondii HOM05D006715 ORTHO05D008345 4.8e-31 139.0 170 44.1
Zm00001eb083170 Zea mays HOM05D006715 ORTHO05D008345 6.3e-31 138.7 218 36.7
PGSC0003DMG400024094 Solanum tuberosum HOM05D006715 ORTHO05D008345 2.9e-28 129.8 140 42.9
SEGI_11470 Sequoiadendron giganteum HOM05D006715 ORTHO05D008345 3.8e-28 129.4 198 36.4
CSS0046539 Camellia sinensis var. sinensis HOM05D006715 ORTHO05D008345 9.4e-27 124.8 141 51.8
HPP92_009296 Vanilla planifolia HOM05D006715 ORTHO05D008345 2.1e-26 123.6 201 39.8
AUR62040600 Chenopodium quinoa HOM05D006715 ORTHO05D008345 4.4e-24 115.9 101 52.5
SEGI_34185 Sequoiadendron giganteum HOM05D006715 ORTHO05D008345 1.1e-19 101.3 120 39.2
Oeu031098.1 Olea europaea HOM05D006715 ORTHO05D008345 3.2e-19 99.8 134 43.3
Nitab4.5_0002764g0020 Nicotiana tabacum HOM05D006715 ORTHO05D008345 4.7e-18 95.9 104 40.4
SHI09071 Sapria himalayana HOM05D006715 ORTHO05D008345 2.8e-15 86.7 347 26.2
Carub.0001s3453 Capsella rubella HOM05D006715 ORTHO05D008345 5.0e-12 75.9 104 36.5
CSS0020713 Camellia sinensis var. sinensis HOM05D006715 ORTHO05D008345 1.5e-11 74.3 125 40.8
Medtr3g062560 Medicago truncatula HOM05D006715 ORTHO05D008345 1.9e-11 73.9 70 58.6
Carub.0001s3454 Capsella rubella HOM05D006715 ORTHO05D008345 7.2e-11 72.0 56 60.7
arahy.Tifrunner.gnm1.ann1.12T13Y Arachis hypogaea HOM05D006715 ORTHO05D008345 2.6e-08 63.5 48 54.2
MCO04G092 Micromonas commoda HOM05D004492 ORTHO05D005602 2.2e-07 60.5 189 29.1
CSS0011701 Camellia sinensis var. sinensis HOM05D006715 ORTHO05D008345 2.8e-07 60.1 34 73.5
SEGI_20433 Sequoiadendron giganteum HOM05D006715 ORTHO05D008345 3.7e-07 59.7 83 44.6
Thecc.08G119000 Theobroma cacao HOM05D004492 ORTHO05D005602 1.1e-06 58.2 127 30.7
Thecc.08G119400 Theobroma cacao HOM05D004492 ORTHO05D005602 2.4e-06 57.0 129 30.2
Thecc.08G119300 Theobroma cacao HOM05D004492 ORTHO05D005602 7.0e-06 55.5 143 30.1
Mapoly0082s0074 Marchantia polymorpha HOM05D004492 ORTHO05D030137 9.1e-06 55.1 219 24.2


User provided reference genes

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