Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sc02g0003910 Simmondsia chinensis HOM05D002879 ORTHO05D002930 6.1e-63 244.6 188 100.0
TAR625G0538 Trochodendron aralioides HOM05D002879 ORTHO05D002930 1.5e-13 80.5 89 55.1
AUR62026686 Chenopodium quinoa HOM05D002879 ORTHO05D002930 2.0e-13 80.1 111 72.1
FvH4_2g13410 Fragaria vesca HOM05D002879 ORTHO05D002930 2.0e-13 80.1 198 60.1
Nitab4.5_0001187g0090 Nicotiana tabacum HOM05D002879 ORTHO05D002930 3.4e-13 79.3 89 61.8
CSS0043717 Camellia sinensis var. sinensis HOM05D002879 ORTHO05D002930 5.8e-13 78.6 93 75.3
Nitab4.5_0002764g0010 Nicotiana tabacum HOM05D002879 ORTHO05D002930 5.8e-13 78.6 89 61.8
Hund26690 Selenicereus undatus HOM05D002879 ORTHO05D002930 9.9e-13 77.8 65 64.6
MBI09_g23868_MAGBIO Magnolia biondii HOM05D002879 ORTHO05D002930 1.3e-12 77.4 89 77.5
Medtr1g098680 Medicago truncatula HOM05D002879 ORTHO05D002930 2.2e-12 76.6 91 68.1
arahy.Tifrunner.gnm1.ann1.MV46JJ Arachis hypogaea HOM05D002879 ORTHO05D002930 3.8e-12 75.9 232 47.0
arahy.Tifrunner.gnm1.ann1.4DJY3R Arachis hypogaea HOM05D002879 ORTHO05D002930 4.9e-12 75.5 210 54.3
HPP92_009298 Vanilla planifolia HOM05D002879 ORTHO05D002930 6.4e-12 75.1 94 68.1
EL10Ac1g01570 Beta vulgaris HOM05D002879 ORTHO05D002930 1.4e-11 73.9 104 70.2
Peaxi162Scf00599g00115 Petunia axillaris HOM05D002879 ORTHO05D002930 1.4e-11 73.9 87 62.1
Peaxi162Scf01294g00118 Petunia axillaris HOM05D002879 ORTHO05D002930 1.9e-11 73.6 90 62.2
PGSC0003DMG400006662 Solanum tuberosum HOM05D002879 ORTHO05D002930 1.9e-11 73.6 94 71.3
vmacro12405 Vaccinium macrocarpon HOM05D002879 ORTHO05D002930 2.4e-11 73.2 111 55.9
Solyc04g071610.4 Solanum lycopersicum HOM05D002879 ORTHO05D002930 3.2e-11 72.8 94 68.1
Sopen04g027590 Solanum pennellii HOM05D002879 ORTHO05D002930 3.2e-11 72.8 94 68.1
Cfa018310 Carpinus fangiana HOM05D002879 ORTHO05D002930 4.2e-11 72.4 100 65.0
Rhsim11G0085100 Rhododendron simsii HOM05D002879 ORTHO05D002930 4.2e-11 72.4 94 71.3
PGSC0003DMG400006661 Solanum tuberosum HOM05D002879 ORTHO05D002930 9.3e-11 71.2 114 59.6
Lalb_Chr03g0035371 Lupinus albus HOM05D002879 ORTHO05D002930 1.6e-10 70.5 98 55.1
Oeu046047.1 Olea europaea HOM05D002879 ORTHO05D002930 2.7e-10 69.7 87 64.4
PGSC0003DMG400024093 Solanum tuberosum HOM05D002879 ORTHO05D002930 2.7e-10 69.7 87 67.8
arahy.Tifrunner.gnm1.ann1.HS8YG8 Arachis hypogaea HOM05D002879 ORTHO05D002930 4.6e-10 68.9 88 62.5
vmacro01469 Vaccinium macrocarpon HOM05D002879 ORTHO05D002930 4.6e-10 68.9 94 71.3
Ah.05g168050 Amaranthus hybridus HOM05D002879 ORTHO05D002930 6.0e-10 68.6 94 71.3
QL02p029929 Quercus lobata HOM05D002879 ORTHO05D002930 6.0e-10 68.6 190 42.6
Sopen04g027560 Solanum pennellii HOM05D002879 ORTHO05D002930 1.0e-09 67.8 86 65.1
vmacro01464 Vaccinium macrocarpon HOM05D002879 ORTHO05D002930 1.0e-09 67.8 92 69.6
vmacro23419 Vaccinium macrocarpon HOM05D002879 ORTHO05D002930 1.0e-09 67.8 92 69.6
EL10Ac1g01576 Beta vulgaris HOM05D002879 ORTHO05D002930 3.0e-09 66.2 40 75.0
SEGI_09931 Sequoiadendron giganteum HOM05D002879 ORTHO05D002930 5.1e-09 65.5 54 68.5
Ah.05g168060 Amaranthus hybridus HOM05D002879 ORTHO05D002930 6.7e-09 65.1 94 64.9
AUR62040595 Chenopodium quinoa HOM05D002879 ORTHO05D002930 6.7e-09 65.1 48 68.8
Rhsim11G0084200 Rhododendron simsii HOM05D002879 ORTHO05D002930 6.7e-09 65.1 93 59.1
CAN.G264.1 Capsicum annuum HOM05D002879 ORTHO05D002930 8.7e-09 64.7 87 66.7
Thecc.08G154600 Theobroma cacao HOM05D002879 ORTHO05D002930 8.7e-09 64.7 50 64.0
TPR.G22164 Trifolium pratense HOM05D002879 ORTHO05D002930 8.7e-09 64.7 99 57.6
TAR625G0963 Trochodendron aralioides HOM05D002879 ORTHO05D002930 8.7e-09 64.7 89 43.8
Actinidia29536 Actinidia chinensis HOM05D002879 ORTHO05D002930 1.1e-08 64.3 40 70.0
CAN.G264.2 Capsicum annuum HOM05D002879 ORTHO05D002930 1.1e-08 64.3 85 71.8
AUR62026685 Chenopodium quinoa HOM05D002879 ORTHO05D002930 1.1e-08 64.3 47 70.2
SEGI_40905 Sequoiadendron giganteum HOM05D002879 ORTHO05D002930 1.1e-08 64.3 69 53.6
Solyc04g071590.3 Solanum lycopersicum HOM05D002879 ORTHO05D002930 1.1e-08 64.3 85 65.9
Sopen04g027570 Solanum pennellii HOM05D002879 ORTHO05D002930 1.1e-08 64.3 85 65.9
Actinidia29538 Actinidia chinensis HOM05D002879 ORTHO05D002930 1.9e-08 63.5 47 70.2
Haze_17773 Corylus avellana HOM05D002879 ORTHO05D002930 1.9e-08 63.5 93 52.7
THA.LOC104809205 Tarenaya hassleriana HOM05D002879 ORTHO05D002930 1.9e-08 63.5 92 48.9
Peaxi162Scf00599g00009 Petunia axillaris HOM05D002879 ORTHO05D002930 3.3e-08 62.8 45 66.7
TWI34G0242 Tripterygium wilfordii HOM05D002879 ORTHO05D002930 3.3e-08 62.8 38 73.7
vmacro23421 Vaccinium macrocarpon HOM05D002879 ORTHO05D002930 3.3e-08 62.8 40 67.5
Aqoxy5G02058 Aquilegia oxysepala HOM05D002879 ORTHO05D002930 4.3e-08 62.4 43 62.8
Nitab4.5_0001187g0070 Nicotiana tabacum HOM05D002879 ORTHO05D002930 4.3e-08 62.4 79 69.6
Rhsim11G0084500 Rhododendron simsii HOM05D002879 ORTHO05D002930 4.3e-08 62.4 98 56.1
Migut.C00983 Erythranthe guttata HOM05D002879 ORTHO05D002930 5.6e-08 62.0 80 73.8
Glyma.10G224300 Glycine max HOM05D002879 ORTHO05D002930 5.6e-08 62.0 215 49.3
Sopen04g027580 Solanum pennellii HOM05D002879 ORTHO05D002930 5.6e-08 62.0 111 60.4
arahy.Tifrunner.gnm1.ann1.4FY7U3 Arachis hypogaea HOM05D002879 ORTHO05D002930 7.4e-08 61.6 88 64.8
Rhsim11G0084400 Rhododendron simsii HOM05D002879 ORTHO05D002930 7.4e-08 61.6 96 64.6
CAN.G264.3 Capsicum annuum HOM05D002879 ORTHO05D002930 9.6e-08 61.2 48 62.5
Actinidia04759 Actinidia chinensis HOM05D002879 ORTHO05D002930 1.3e-07 60.8 91 64.8
CiPaw.16G010900 Carya illinoinensis HOM05D002879 ORTHO05D002930 1.3e-07 60.8 92 67.4
Migut.I00192 Erythranthe guttata HOM05D002879 ORTHO05D002930 1.3e-07 60.8 80 68.8
FAN24G2761 Fragaria x ananassa HOM05D002879 ORTHO05D002930 1.3e-07 60.8 190 52.6
Nitab4.5_0002764g0050 Nicotiana tabacum HOM05D002879 ORTHO05D002930 1.3e-07 60.8 75 64.0
Os02g0543000 Oryza sativa ssp. japonica HOM05D002879 ORTHO05D002930 1.3e-07 60.8 40 70.0
Atru.chr13.2082 Acer truncatum HOM05D002879 ORTHO05D002930 1.6e-07 60.5 185 40.0
Ca_23081_v3 Cicer arietinum L. HOM05D002879 ORTHO05D002930 1.6e-07 60.5 92 66.3
Rhsim11G0084700 Rhododendron simsii HOM05D002879 ORTHO05D002930 1.6e-07 60.5 96 63.5
Rhsim11G0085000 Rhododendron simsii HOM05D002879 ORTHO05D002930 1.6e-07 60.5 61 55.7
Solyc04g071580.3 Solanum lycopersicum HOM05D002879 ORTHO05D002930 1.6e-07 60.5 75 56.0
EL10Ac1g01569 Beta vulgaris HOM05D002879 ORTHO05D038231 2.1e-07 60.1 185 45.9
Solyc04g071600.3 Solanum lycopersicum HOM05D002879 ORTHO05D002930 2.1e-07 60.1 111 58.6
Rhsim11G0084300 Rhododendron simsii HOM05D002879 ORTHO05D002930 2.8e-07 59.7 96 65.6
Sc26g0002520 Simmondsia chinensis HOM05D002879 ORTHO05D002930 3.7e-07 59.3 44 61.4
Sc26g0002530 Simmondsia chinensis HOM05D002879 ORTHO05D002930 3.7e-07 59.3 44 61.4
SEGI_08871 Sequoiadendron giganteum HOM05D002879 ORTHO05D002930 8.1e-07 58.2 49 61.2
Zm00001eb362480 Zea mays HOM05D002879 ORTHO05D002930 8.1e-07 58.2 67 47.8
EL10Ac1g01577 Beta vulgaris HOM05D002879 ORTHO05D002930 1.1e-06 57.8 45 57.8
Migut.N01983 Erythranthe guttata HOM05D002879 ORTHO05D002930 1.1e-06 57.8 82 56.1
Sc26g0002500 Simmondsia chinensis HOM05D002879 ORTHO05D002930 1.1e-06 57.8 91 67.0
CAN.G264.4 Capsicum annuum HOM05D002879 ORTHO05D002930 1.8e-06 57.0 90 56.7
vmacro01468 Vaccinium macrocarpon HOM05D002879 ORTHO05D002930 1.8e-06 57.0 66 51.5
Actinidia17783 Actinidia chinensis HOM05D002879 ORTHO05D002930 3.1e-06 56.2 58 53.4
Haze_17772 Corylus avellana HOM05D002879 ORTHO05D002930 3.1e-06 56.2 93 50.5
Migut.C00982 Erythranthe guttata HOM05D002879 ORTHO05D002930 3.1e-06 56.2 40 60.0
Eucgr.E02058 Eucalyptus grandis HOM05D002879 ORTHO05D002930 3.1e-06 56.2 89 57.3
Potri.005G193901 Populus trichocarpa HOM05D002879 ORTHO05D002930 3.1e-06 56.2 45 57.8
Prupe.8G034100 Prunus persica HOM05D002879 ORTHO05D002930 3.1e-06 56.2 195 50.8
Zm00001eb263060 Zea mays HOM05D002879 ORTHO05D002930 3.1e-06 56.2 51 56.9
Zm00001eb091920 Zea mays HOM05D002879 ORTHO05D002930 4.0e-06 55.8 74 74.3
Hund17173 Selenicereus undatus HOM05D002879 ORTHO05D002930 5.3e-06 55.5 91 58.2
Zm00001eb407710 Zea mays HOM05D002879 ORTHO05D002930 5.3e-06 55.5 70 78.6
AUR62040599 Chenopodium quinoa HOM05D002879 ORTHO05D002930 6.9e-06 55.1 72 54.2
MBI09_g20569_MAGBIO Magnolia biondii HOM05D002879 ORTHO05D002930 6.9e-06 55.1 113 57.5
MBI09_g23867_MAGBIO Magnolia biondii HOM05D002879 ORTHO05D002930 6.9e-06 55.1 113 57.5
Os01g0963600 Oryza sativa ssp. japonica HOM05D002879 ORTHO05D002930 6.9e-06 55.1 55 54.5
vmacro02690 Vaccinium macrocarpon HOM05D002879 ORTHO05D002930 6.9e-06 55.1 39 66.7
Potri.005G193800 Populus trichocarpa HOM05D002879 ORTHO05D002930 9.0e-06 54.7 43 55.8
Hund26910 Selenicereus undatus HOM05D002879 ORTHO05D002930 9.0e-06 54.7 91 68.1


User provided reference genes

Program Settings